Rissa tridactyla (black-legged kittiwake): 128912756
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Entry
128912756 CDS
T09443
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
128912756 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128912756 (SPATA13)
Membrane trafficking [BR:
rtd04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
128912756 (SPATA13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
PH_5
Motif
Other DBs
NCBI-GeneID:
128912756
NCBI-ProteinID:
XP_054065198
LinkDB
All DBs
Position
1:complement(23902032..24067657)
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AA seq
1352 aa
AA seq
DB search
MFRVTFNVVTEKVTFTLAACPSVTWKAVQPEELSSPGRCKSKTNGGAADEGEAARSAGGD
SSVAVSYPSLRLHAYSIESMTTFPNGCGNGTTVTCIVMDNKEPQNQTTCVSHNGGYSTSN
SHEEEIQEDKLSPSKIMRFFTTPRKRANSSSDRPRSLVLMGNSSTWNALSSIRKMGSFKK
LKSSVLQGIQTRECSDILNENGVGKQGSKGAVVRVQTNRYSYSGPLHDFQNAVDGLASDC
SDAEDSDESFLRNTHRSRSIRRAYGAGRINLLDTDKVQSHHNCTRPTSPVIAEPKICEIL
VKDSENNRIIYRRSKSSDNLNFLKKSSFKRKSTSNLTDLKVGNEKQMPTRTVSVTSADSD
KTGGNPERRSKRWKSPIRAKDFDRVLRLVSNVTDVAWKKDGPKSTAPSPSEQSQRTRSNS
RLHDDYSRRVSSSTDHDRKRCTSPVSSPDSSLPGTPCLQSPAVAQDKEAETNVAVAEDKS
LRTSSGIPDSDSLSPTLNDISPFPNEVFYSDSDEPKATQQFTHEAENPHVPVRPTTPKPQ
SPTAEKVKCNMNFQCPDHHSTLSLSSSESEERVEVAGPKLGRNPVCFQDSVQTVYYDDGN
EDSGISSHSQLSLNLASGAEEKKEEVVSDDHWKRSPSQDEEKTDTQKVAPRRWGSGKRSR
PRPLSDYGQMSIRSFSIPEDAVAVESQKTDCTDGENQPGLASVGSVIQSNTVGYHRGRKR
RPISVIGGVNFYGNGPAEEIEGLLTQPATRPPVPAHQVPPYKAVSARFRPLTFSQSTPIG
LDRVGRRRQMRTSNVAADGGTESSALVDDNGSEEDYSYEELCQATPRYLQPGGEQLAINE
LISDGSIVYAEALWDHVTMDDQELGFKAGDVIRVLEASNKDWWWGRNEDKEAWFPASFVR
LRVNQEEVPENCSSIQDEEQDADISKHRQKIAENKDQMRTNVIQEIMNTERVYIKHLKDI
CEGYIRQCRKHTGMFTAAQLSTIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFL
QHQEGFAIYSEYCNNHPSACIELSKLMKQGKYRHFFEACRLLQQMIDIAIDGFLLTPVQK
ICKYPLQLAELLKYTTQEHSDYNNIKAAYEAMKNVACLINERKRRLESIDKIARWQVSIV
DWEGPDVLARSSELIHSGELTKISKQGKSQQRTFFLFDHQLVFCKKDLLRRDILYYKDRI
DMDEMEIVDTEDGRDKDFNINVKNAFKIINRATEEIHLFCAKKQEDKKRWMEACESERRR
VREDKEMGMEISENQKKQAMQNARKSRHGKIKGVSYNGCPVPPPHQSLHPIHQRHITVPT
SIPQQQVFALAEPKRKPSLFWHTFNKLTPFKK
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtgtcaccttcaatgtagtgacagagaaagttaccttcaccttggcagcctgc
ccctccgtcacgtggaaggcagtgcagcctgaggagctgagctcacccggtcgatgcaaa
agcaagacaaacggaggtgcagcagatgaaggagaggcagcgaggtcagctggtggggac
agcagcgtcgctgtgagctaccccagcctccgtctccatgcctacagcatcgagagcatg
acaacgtttcccaatggctgtggaaatggcaccaccgttacttgtatagttatggataat
aaagagccccaaaaccagactacctgtgtcagtcataatgggggatatagcaccagcaac
agtcacgaggaggaaatccaagaggataagctcagcccttccaaaatcatgcgctttttc
accacccctcgtaaacgggctaattccagctctgacaggcctcgttctctggttttgatg
ggtaactcgtccacctggaatgctttgtcttccatcagaaaaatgggatctttcaagaag
ttgaaatcttcagttctccaaggaattcaaacaagggaatgctcagacatcttaaatgag
aacggcgtaggcaaacagggttcaaagggggcagtggtgagagttcagactaacaggtat
tcctattcggggcctctacatgacttccagaacgcagtggatggtttagcttctgactgc
tccgatgcagaggacagcgacgagtctttcctgaggaatacccatcgctcacgcagcatc
aggcgggcttacggtgctggccgcataaacttgctagacacggataaagttcagagtcat
cacaactgtactaggccaacatcacctgtcattgcagagccaaagatctgtgaaattttg
gtgaaagactctgaaaacaacaggatcatttatcggagaagcaaaagttcggataatttg
aactttctgaaaaaaagctcattcaagcggaagtccacctcgaacctcaccgacctcaag
gttggaaatgaaaaacagatgccaacaaggactgtgagtgttacttctgctgactcggac
aaaaccggtgggaaccccgagaggagatccaagcgatggaagagccctatcagggcaaag
gattttgaccgagttttgagactcgtcagtaatgttacagatgttgcgtggaagaaggat
ggcccgaagagcacggctccttctcccagcgagcagtcccagagaacaaggtcaaacagc
agactgcacgatgactactcccgcagggtttccagcagcacggatcatgacagaaagcga
tgcacctccccagtatctagtccagactcttccttgccgggaacaccttgtctgcaaagc
cccgctgttgctcaggataaagaggctgaaacgaatgtagctgttgctgaagacaaaagc
ctcaggacgtcatcaggtatcccggactctgatagcttatcacccaccctcaatgacatt
agtccatttcccaatgaagtgttttattcggactcggatgaaccaaaagctacccagcag
tttacacacgaagctgaaaaccctcacgttccagtcaggccgactactccaaagcctcag
agtcccaccgcagagaaggtcaagtgcaatatgaatttccagtgcccagaccatcacagc
acgttgtcactgagctcatcggagagcgaggagagagtagaggtagcggggccgaagctg
ggcaggaatcctgtttgcttccaggactcggtgcagactgtgtactacgatgatggaaac
gaagacagtggcataagcagccactctcagctgagtctcaatttagcctctggtgctgaa
gagaaaaaggaagaggttgtttctgatgaccactggaagaggtccccatcccaggatgaa
gaaaagacagacacacaaaaggttgcacccaggagatggggctctggaaaaagatctcgt
cccagacctctttcagactatggccaaatgtccatcagaagtttctctataccagaagat
gcagttgcggtggagtctcagaagacagactgcacggatggagaaaatcagccaggactg
gcttccgtcgggtctgtgatccaaagcaatacagtaggctaccacagaggacgaaaaaga
agacccatctccgtaataggtggggtcaatttctatggaaacggtccggcagaagagata
gaaggtctgctgacacaacctgcaacgcggccacccgtcccagcgcaccaggtcccccct
tacaaagccgtttcggccaggttccggccgctcaccttttcacaaagtacccccatcggc
ctggaccgggttggacgaaggcggcagatgagaacatctaatgttgctgcagatggtggg
accgagtcttcggccttagtggacgacaatggcagcgaggaagactacagttacgaggag
ctgtgccaagccactcccaggtacctgcagcctggaggggaacagctagcaattaatgag
ctgataagcgatggcagcattgtctatgcagaggctctctgggaccatgtgactatggat
gatcaagagctgggcttcaaagctggagatgtcattagagttctagaagcttccaacaaa
gactggtggtggggaagaaatgaggacaaggaagcctggtttccagctagcttcgtcagg
ctgcgagttaatcaggaagaagtgccagagaattgtagtagtatccaggatgaagaacaa
gatgcagatattagcaagcatcgtcagaaaatagctgaaaacaaggatcagatgagaacc
aacgttatacaggaaattatgaacacagaacgagtctatatcaagcacctcaaggacatc
tgtgagggttatattcggcagtgtcgcaaacatacaggaatgttcaccgcagctcagtta
agcaccatttttggaaatattgaagatatttacaagttccaaaggaagtttctgaaggat
cttgagaaacagtacaacaaagaagaacctcatctaagtgaaatagggtcatgttttctt
caacaccaagaaggctttgctatttattcagagtactgtaacaatcatcccagtgcctgc
attgaactttcgaaactgatgaaacagggcaaataccgtcacttctttgaggcctgtcgc
ttgcttcagcagatgattgacattgccattgatggttttcttctcacgcccgttcagaaa
atctgcaagtaccctctgcagcttgcagaattgctcaaatacaccactcaggagcacagc
gattataacaacataaaagctgcatatgaggctatgaagaacgtagcgtgcctgatcaat
gagcgaaaacgaagactagaaagcatagacaagattgcacgttggcaagtctctatcgta
gactgggagggaccagatgtgttagccagaagctcagaactgatccactcaggagaactg
accaaaatatcaaagcaaggcaaaagccagcagaggactttcttcctttttgaccatcag
cttgtgttctgtaagaaggacttactgagaagggacatcttgtattataaggatcgtatt
gacatggatgagatggaaattgtggacactgaagatggcagagacaaagactttaacatt
aatgtcaagaatgcttttaagataataaacagagcaacagaagagattcatttgttctgt
gcaaaaaaacaagaggataaaaagagatggatggaggcatgcgaaagtgaaaggagaaga
gttcgggaagacaaggaaatgggaatggaaatctcagaaaaccagaagaaacaagccatg
cagaatgcccgtaaatcgaggcatggaaaaattaaaggtgtaagctataacgggtgtcct
gtgcctcctccacaccaaagcctgcatcctattcatcagcgccacatcactgtgcctacc
agcatcccgcagcagcaggttttcgccctggcagaacctaagcggaagccatccctcttc
tggcataccttcaacaaactcactccctttaaaaagtga
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