Rissa tridactyla (black-legged kittiwake): 128912785
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Entry
128912785 CDS
T09443
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtd03009
]
128912785 (DDX52)
Enzymes [BR:
rtd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128912785 (DDX52)
Ribosome biogenesis [BR:
rtd03009
]
Eukaryotic type
90S particles
Helicases
128912785 (DDX52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
128912785
NCBI-ProteinID:
XP_054065279
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Position
7:49279314..49287083
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AA seq
623 aa
AA seq
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MEVQELFRRLGAGARFDVRRFGGDARRFGVMKGSGGGVSLESLDFFGRKEGAPLASAGEG
WGLAGAGEEGKGGELQMEDEAGSNDGEVSGKRKRTAESSGGKRKKKKTREAASMLELSES
NGIKWMSSLEAKFEDAKDKKPTAEKLERLRRQKINRFRNQHRISIQGTDLPDPIATFEQL
QKEYKIHPKIMENIQAAGFRVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFCIPLLTH
LKQPRNKGFRAVIVSPTRELASQTHRELVKLAEGTGFRIHMIHKAAEAAKKFGPKSSKKF
DILVTTPNRLIYLLKQDPPAIDLTSVEWLVVDESDKLFEDGKSGFRDQLASIFLACTSHV
VRRALFSATFAHEVEEWCKLNLDSVVLVSVGARNSAAETVEQELLFVGSETGKLTAMREL
VKKGFAPPVLVFVQSIERAKELFHELIYEGINVDVIHADKTQQQRDNVVHSFRAGKIWVL
ICSALLARGIDFKGVNMVINYDLPTSAVEYIHRIGRTGRAGHTGKAVTFFTEDDKPLLRS
IANVIQRAGCPVPDYIKHLPKLQSKQKKKLIKKPLKRESIRTTPECFLKKGKRKTKTIKE
NIKEKKNVKEDKNGSKLQTVSKS
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggaagttcaggagctgtttcggcgcttgggggccggtgcccgctttgatgtgcggcgt
tttgggggagatgcgcggcgatttggggtgatgaaggggagcggcggcggcgtctcgctg
gagagcctcgacttcttcggccgcaaggagggagcccccttggcgtctgcgggggaaggc
tgggggctcgcaggggctggcgaggagggaaagggtggtgagctgcagatggaggatgaa
gcagggagtaacgatggagaggtgtcaggaaagagaaaaagaactgcagaaagcagtggt
ggcaaaagaaaaaagaaaaagacacgagaagcagcatcaatgttggagttgtcagaaagt
aatggaataaagtggatgtcctctctggaagcaaaatttgaagatgcaaaagacaaaaaa
cctactgcagaaaaacttgaacgcttgagaagacaaaagataaaccgcttcagaaatcag
cacaggattagcattcaaggaacagatcttccggacccaattgccacgtttgagcaactt
caaaaggaatacaaaatccaccctaaaatcatggagaacattcaagctgctggtttccgg
gtcccaacaccaatccagatgcaggctattcccgtcatgcttcatggtcgggaacttcta
gcttcagctcctactgggtctggaaaaacactggcattttgtattcctctcttaacacat
ctgaaacaacccaggaacaaaggattcagagctgtgatagtatcgcctacccgagaactc
gctagccagacgcatcgggagctggtgaagttggctgaggggacgggcttcagaatacat
atgatccacaaggcagctgaggcagcaaagaagtttgggcccaagtcttctaagaaattt
gatatactagttactactccaaacagacttatttatttgctgaaacaagatcctccagca
atagacttgaccagcgtggagtggctggtggtggatgaatcggacaaactgtttgaagac
gggaagtcggggttccgagatcagctggcctccatcttcctggcatgcacgtcccacgtg
gtgagaagagccttgttcagcgcaacctttgcacatgaggtagaggagtggtgtaaactc
aaccttgacagcgttgttctggtgtctgttggagcaagaaactctgcagccgagacagta
gaacaagagctgctgtttgttggatcggagacaggaaaactaactgcaatgagagagctt
gttaaaaagggttttgctcctccggtccttgtttttgtacagtctattgagagggccaaa
gagcttttccatgaacttatttacgaaggcatcaatgtggatgtcatccatgcagacaaa
actcagcaacagagagataatgtagtacacagtttcagagctgggaagatctgggtgctc
atctgctcagccttactagctcgcggaattgacttcaaaggagtgaatatggtcatcaat
tacgatttgccaacgagtgcggtggaatacatccacaggataggtcgtactggaagagcg
gggcacacaggaaaagcagttactttctttacagaagatgataaacctttattacggagt
atagccaatgttattcagcgagctggttgtcctgtgccagactacataaaacaccttccc
aaactgcaaagcaaacaaaagaagaaattaattaagaaaccgttgaaaagagaatccatt
cgtaccaccccggagtgcttcttaaaaaaaggcaaaagaaaaacgaaaactataaaggaa
aatattaaggaaaaaaagaatgttaaagaagataaaaatggcagtaaattacagactgtt
tcaaaaagctga
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