Rissa tridactyla (black-legged kittiwake): 128912832
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Entry
128912832 CDS
T09443
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
128912832 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128912832 (RNF43)
Enzymes [BR:
rtd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128912832 (RNF43)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128912832 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
KIAA1549
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
128912832
NCBI-ProteinID:
XP_054065409
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All DBs
Position
7:complement(44887712..44953293)
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AA seq
833 aa
AA seq
DB search
MSAGPQLQLAVLWPWLLMATLQAGLGHTGLALVAAVESERSAAQKAIIRVIPLKVEPIIL
EGEFANVAEVTPAEGKLLQSHPLSLCNTSEDEHTESGFITIVKLEQPDRDPNPCLSLANK
AKLAGERGARAILFDITDDESAADQLRKPRGLSQPVVLIRGHDAELLMGVVNKNREAHVK
IEVKEPPAWPDYDVWILLTVVSTVVVIILIFVVRTKCQLNRTQDPLQQQTMQAIGQLATR
KYQARCRQASRWDSASSCSSAPVCAICLEEFSEGQELRIISCSHEFHRECVDPWLQQHHT
CPLCMFNILARESVDQATAAGSRLAPRDMEPGRHLHLFRQHPGHALYHLPHAYPQRNFRR
FPPEPAHGNPFFHSPELSQLDFGTIHYMPYRPATSLLACGHPSPLAPGLLGQQHPSPSAC
GQTLPPHRTCSLQPQPPCLGLKAALAQKQHRAPALRRGGGHGHQHNSSGSGESYLTEHSG
YLADGPGSDSSSGPCHGSSSDSVLNCTDVSLQGIHGSCSTFRSSLSSDYDPFVYCSSEGP
ATDNGQERPRPPRETRPRSLDLMVPGGAAPAKPQVLSHVHYHHHQHHHYRRDAECPPGRA
GQGPGQRKSRYSGAKVGFHGARTQKRTEKSHHSQQPLESSAVLPEAALAGQPACPQQGRE
PPHVPSASPNRLDFSVDANRQSGAAGTSPVPLPPRHSLQSRHHRRKRKCPLEPDPALLPQ
DSALPKACDAHVPHGHPAGYRCSPEVQPLIPSAPLPCSSGSRPLWKCLVPQSGSELKKQE
EGLSGREGNRAVPADFSGTGTSRHSLSLHLHCPAQQGGQGSEEEAQDVHEHSV
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctggcccccagctgcagctggctgtcctctggccttggctgctcatggcgacc
ctgcaggcaggactgggccatacagggctggcgctggtggcggcggtcgagtcggagagg
tcagcggcgcagaaagccatcattagggtgatccccctgaaagtggagccaatcattctg
gaaggggagtttgcaaacgtcgctgaggtgactccagccgaaggaaaactgctccagtcc
cacccgctgtccctgtgcaacaccagcgaggatgaacacaccgagtcggggttcatcacc
atcgtcaagcttgaacagccggatcgggatcccaacccctgcctgtcgctggctaacaag
gcgaagctggcgggggagcgtggagcccgtgccatcctttttgacattaccgatgatgaa
agcgctgctgatcagctgagaaagccccgaggtctgagtcagcctgtggttctgatcagg
ggccatgatgcggagcttctcatgggcgtcgtgaacaagaacagagaggcccacgtgaag
atagaggtcaaggagccaccagcttggccagactacgacgtgtggattcttctcacggtg
gtcagcaccgtggtcgtcatcattttgatttttgttgttcgcacaaagtgccagctgaac
aggactcaggaccccttgcagcagcagaccatgcaggccatcgggcagctggccacgcgc
aagtaccaggcaaggtgccggcaggcgtcgcggtgggactcggccagcagctgcagctca
gccccggtctgtgcaatttgcctggaggagttcagcgagggtcaggaactgcggatcatc
tcgtgctcccatgagtttcatcgggagtgtgttgacccctggctgcagcaacaccacacg
tgtccactttgcatgttcaatattcttgccagagaatcggtggaccaggccacagccgct
ggctccaggctggctcctcgggacatggagcccggacggcatctccaccttttccgccag
cacccaggacatgccctttaccacctcccacacgcgtatcctcagaggaacttcaggagg
tttcccccagagccagcccatggcaaccccttcttccactctccagagctctcccagctg
gattttggcaccatacactacatgccttacaggccagccacctccctgctcgcctgtggc
cacccgtcccccctggccccgggcttgctgggccagcagcatcccagcccctcggcgtgc
gggcagacgctgccaccccacaggacttgttctctccagccccagcccccctgcctgggg
ctgaaggcagccctggcgcagaagcagcaccgtgcccccgccctgcgccgggggggcggc
cacgggcaccagcacaacagcagcggctctggggagagctatctcacggagcacagcggg
tacctggcagacgggccgggcagcgactccagctcggggccctgccacggctcctccagt
gactccgtgttgaactgcacggatgtcagcctgcagggcatccacggcagctgctccact
ttccgcagctccctcagcagtgactacgaccccttcgtgtactgcagctcggagggaccc
gccacggacaatggccaggagcggccgcggccgccaagggagacacggcccaggtccctg
gacctgatggtgcctgggggggctgctccggccaagccccaggtgctcagccacgtccac
taccaccaccaccagcaccatcactacagaagagatgcggagtgtccaccggggcgggct
gggcaggggcctgggcagcgcaaatcccggtactctggggctaaggttggcttccacggt
gctcggacacaaaagaggactgagaaaagccatcactctcagcagcctctggaaagcagt
gctgtgctaccggaggcagctctggcaggacagccagcctgtccccagcaaggccgggag
ccccctcatgtcccctccgcttctccaaacaggttggacttcagtgtagatgccaacaga
caatcaggagcagctggcacatcccctgtcccgctgcccccaagacacagcttacagagc
cgtcatcaccgaaggaaaagaaagtgtcccctcgagcccgaccctgctctcctgccccag
gactcagccttgcccaaagcctgtgatgctcacgttcctcacggccatcccgctggctac
cgctgctcgcccgaagtccagcccctgatcccaagcgctcccctgccctgcagctcgggc
tctcggccgctctggaagtgtttagtgccgcagtccggctccgagctgaaaaagcaggag
gaggggttgtcaggacgggagggaaaccgcgctgttcctgctgatttctcagggacgggc
acctccagacacagtctgagtcttcaccttcactgcccggctcagcagggtggtcaggga
tctgaagaggaggcacaggatgtccatgaacactcagtttaa
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