KEGG   Rissa tridactyla (black-legged kittiwake): 128912833
Entry
128912833         CDS       T09443                                 
Symbol
SUPT4H1
Name
(RefSeq) transcription elongation factor SPT4
  KO
K15171  transcription elongation factor SPT4
Organism
rtd  Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:rtd00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    128912833 (SUPT4H1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rtd03021]
    128912833 (SUPT4H1)
   03019 Messenger RNA biogenesis [BR:rtd03019]
    128912833 (SUPT4H1)
Transcription machinery [BR:rtd03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     128912833 (SUPT4H1)
  RNA polymerase I system
     128912833 (SUPT4H1)
Messenger RNA biogenesis [BR:rtd03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     128912833 (SUPT4H1)
SSDB
Motif
Pfam: Spt4
Other DBs
NCBI-GeneID: 128912833
NCBI-ProteinID: XP_054065410
LinkDB
Position
7:complement(44882621..44886597)
AA seq 117 aa
MALETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI
IAMMSPEDSWVSKWQRISNFKPGVYAVSVTGRLPQGIVRELKSRGVAYKSRDTAIKT
NT seq 354 nt   +upstreamnt  +downstreamnt
atggcgctggagacagtccccaaggatctgcggcacctccgcgcctgtctcctctgctcc
ctcgtcaagaccatcgaccagttcgagtacgacgggtgcgacaactgcgatgcctacctg
cagatgaagggcaaccgcgagatggtctacgactgcaccagctcctccttcgacggaatc
attgccatgatgagccctgaggacagctgggtctccaagtggcagcgaatcagtaacttc
aagccgggtgtctatgcagtgtctgtgaccggccgcctgccccagggcatcgtccgagag
ctgaagagccgcggcgtggcgtacaagtcccgagacacagctataaaaacctaa

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