Rissa tridactyla (black-legged kittiwake): 128912941
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Entry
128912941 CDS
T09443
Symbol
CUX1
Name
(RefSeq) homeobox protein cut-like 1 isoform X1
KO
K09313
homeobox protein cut-like
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtd03000
]
128912941 (CUX1)
Transcription factors [BR:
rtd03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
128912941 (CUX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
128912941
NCBI-ProteinID:
XP_054065703
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All DBs
Position
7:complement(55208934..55489915)
Genome browser
AA seq
1537 aa
AA seq
DB search
MAANVGSMFQYWKRFDLQQLQRELDATATILANRQDESEQSRKKLIEQSREFKKNTPEDL
RKQVAPLLKSFQGEIDALGKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRMH
DIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAENIALEKEQKLQ
NDFAEKERKLQETQMSTASKLEEAEHKVQALQTALEKTRTELFDLKTKYDEETTAKADEI
EMIMTDLERANQRAEVAQREAETLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSSLE
VELAAKEREIAQLVEDVQRLQGSLTKLRENSSSQISQLEQQLTAKNSTLKQLEEKLKGQA
DYEEVKKELNILKSMEFAPSESSGAQDASKPLEVLLLEKNRSLQSENATLRITNSDLSGS
ARRKGKDQPESQRPATLPASPPSQLLRNAGEQASNTNGTHQFSPTGLSQDFFSSSLASPS
LPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTSMIFSTGPYSTNSISSQSPLQQSPDV
NGMAPSPSQSESAGSISEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEI
LARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQNLNRLFQEVPKRR
NGSEGNITTRIRTTETGSDEAIKSILEQAKRELQVQKTAEPAQPPSASSSGNSDDAIRSI
LQQARREMEAQQAALEPALKTPPLSQADISILSPKLVSTPAMSSVSSYSPLAISLKKHSA
VTDSSISALQNLSGLKKEPQEAPVLELHGVSDSAQGMLRHVKNELGRGGVWKDHWWNTVQ
HERRNTALPEDVKVEEASGGKEKVSNQTRPDRSQLQGPSSSEYWKEWPNAESPYSQSSEL
SMTGASRSETPQNSPLPSSPIVSLSKPSKPSVPPLTPEQYEIYMYQEVDTIELTRQVKEK
LAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQCVL
PAQGQQQGQVLHSVTSLQDSLQQGCASSESTPKTSASCSPAPESPMSSSESVKSLTELVQ
QPCPAIETSKDGKSQESSEPSASESQSTTPLPLSGHSALSIQELVAMSPELDTYGITKRV
KEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNV
EKLMDMKRMEKKAYMKRRHSSVSDSQSCESSSAGIDYSQGASPQPQHQLKKPRVVLAPEE
KEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGSQSQ
AGSSDSPSARSSRAAHSSEGDSCDGVDAEGPPEGKPSGPEADEYSNATTKSQGGPAESAF
EAGEEALQGARSSEKAEPFQAESLEDTDDEGRLRAPRQSSPPASQRPGEALETLPNSATE
GDASTSAASTSVLTGESSYKSKESSEKISSVPSTSSTPAAGSQKANSLQSLFGFSEAASS
RNTRDSSLRKKKAANLNNIIHRLEKAASREEAVEWEF
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaatgtgggatcgatgtttcaatattggaagcgctttgatttacagcagctg
cagagagagctcgatgccacagcaacgatattggctaaccggcaagatgaaagtgagcag
tctaggaaaaaacttatcgagcaaagtcgcgagttcaagaagaacactccagaggacctg
cgcaaacaggtagctccattactgaagagtttccagggagagattgacgcattgggcaaa
agaagcaaagaagcagaggcagccttcttgaatgtttataagagattaattgatgttcca
gatccagttccagccttggatttaggacagcagcttcagctgaaggttcaacgtatgcac
gatattgaaacagagaaccagaaacttagggaaactctagaggaatacaataaagaattc
gctgaggtgaaaaatcaggaggttacaataaaagcacttaaagagaaaatccgagaatat
gaacagaccctgaagaaccaagcggagaatatagcccttgaaaaagaacaaaagttacaa
aatgattttgcggagaaggagagaaaattgcaggagacacagatgtcgacagcctcgaag
ctggaagaagccgaacacaaagttcaagctttgcaaacagccttggaaaaaaccagaaca
gaactatttgatctgaaaacaaaatacgatgaagaaactactgcaaaggctgatgaaatc
gagatgatcatgacagaccttgaaagagcaaatcagagggcagaggtggctcagagagaa
gcagagaccttaagggagcagctctcgtcagccaacaaatctctccaacttgctacgcag
atccagaaggcacctgatgtggaacaggccatcgaggtgctaacacggtccagcttggaa
gtagaactggctgcgaaggagcgggaaatcgcccagctggtagaagatgtccagagactc
cagggcagcctcaccaagctgcgggagaactccagcagccaaatctcacagctggagcag
cagctgaccgccaaaaacagcacactcaaacaactggaagaaaaactgaaaggacaggct
gattatgaagaggttaagaaagaattaaatatattgaaatccatggagtttgcaccatct
gaaagctctggtgcgcaggatgcctctaaaccgctggaggtgctgctgctggagaagaac
cgctccttgcagtccgagaacgccacgctgcgtatcacaaatagtgacctgagtgggtca
gccaggagaaaagggaaagaccagcctgagagtcagcgtcctgcaaccttgccggcctcc
cctccttctcagttgctccgcaacgcgggggagcaggcttccaatactaatggtacacac
cagttctcaccaacgggtttaagtcaagactttttcagctcatccctggcgagccccagc
ttacccctggcctccacaggaaaatttgcactaaactctctcctccagcgacagctaatg
cagtccttctactccaaggcaatgcaggaagcaggaagcacaagcatgattttttcaaca
ggtccatacagcacaaactccatatcttcccaaagtccgttacaacaaagtccggacgta
aatggcatggccccgtctcccagccagtcagaaagtgctgggagcatctctgaaggcgag
gagatagacacggccgaaattgcacgtcaggtgaaagagcagttgatcaagcacaatatc
ggacagcggatatttggacattatgtgttgggactgtcgcaagggtctgtgagcgagata
ctagcccggccaaagccatggaataaactgactgtgagaggcaaggagccatttcataag
atgaagcagttcctctcggacgagcagaacatcttggctcttcgcagcatccagggtaga
caaagagagaatccaggccagaacctgaacagactatttcaggaagtaccgaaacgaaga
aatgggtctgaaggtaatataaccacaagaatccgaaccacagagactggctctgatgaa
gccatcaaatccattctcgaacaagccaaaagggagctgcaagtacagaaaacagctgag
ccggctcagccgccttctgcatctagcagtggcaattctgatgatgctattcgatccatt
ctgcaacaagcccgacgagaaatggaggcacagcaggctgcccttgaacctgccttaaaa
acaccacctttatctcaagctgacatttctatcctgtcccccaaactagtatctacacct
gcaatgtcttcggtttccagctattctcctttggccatatccctgaagaaacattcagct
gtcactgattccagtatctctgcattgcagaacctctctgggctcaaaaaggagcctcag
gaggcacctgtgttagagcttcacggagtaagtgattctgcccagggtatgttgaggcat
gttaaaaatgagttgggacgtggtggtgtttggaaggaccattggtggaatactgtgcag
catgagagaagaaatacagctcttcccgaagatgtaaaagttgaggaagccagtggtgga
aaagaaaaggtcagcaatcagactaggccagatcgtagccagctccaaggaccgtcttct
tcagagtattggaaagagtggccaaacgctgaatctccgtactcccagagttctgaattg
agcatgactggggcgagtcgcagtgagacaccacaaaatagccccctcccttcatcccct
atcgtgtctttgtcaaagccatccaaaccttcagttcctccactgacacccgagcagtat
gagatttatatgtaccaggaggtggatacgatagagctaacgcggcaggtcaaagaaaag
ctagcaaagaatggcatctgccaaaggatctttggggaaaaggtattggggctgtcccaa
ggaagtgtcagtgacatgctctccaggccaaagccatggagtaaattgacccaaaaaggc
cgagaaccatttattcgtatgcagctctggttgaatggtgagctgggacagtgtgtcctg
cctgcacaagggcagcaacaaggacaagtccttcactctgtgacatcattacaggattcc
ctacagcagggatgtgcaagctcagaaagcactccaaagacttctgccagttgcagtcct
gctcctgaatctcccatgagttccagcgaatcggtgaaaagcctgactgaattggtacag
caaccctgtcccgctatagagacgagtaaggatggcaaatcccaagaatctagcgagccg
tctgcttctgaatcccaatctacaacacctttgccgctgtcaggccactcggcactcagc
attcaagaactcgttgctatgtcccctgagctggatacatatggcattacgaaaagggtc
aaagaagtgctaacggacaacaatctcggtcagcgtttgtttggggagacaatcctaggg
ctaacacaaggctctgtctcagaccttctggctcgcccgaagccctggcacaagctgagt
ttgaagggacgggaaccctttgtccgcatgcagctgtggctgaacgatcccaacaacgtg
gagaagctgatggatatgaaacgaatggagaaaaaagcctacatgaaacggcgacacagc
tctgttagcgacagccagtcttgtgagtcctcgtccgctggaatcgactacagccaggga
gccagcccgcagccgcagcaccagctgaagaagccccgggtggtgctggcaccagaagag
aaggaagctctgaaacgagcctaccagcaaaagccatacccatcaccaaaaaccattgag
gaactcgctacgcagctcaacttgaaaaccagcaccgtgatcaactggttccacaattac
aggtctcgcatccgccgggagctgttcattgaggagatccaagccgggagccagagccag
gctgggtcgagcgactctccttctgccagaagcagcagggccgctcacagctcggaggga
gacagctgcgatggcgtggacgcagaaggcccacctgaaggaaagcccagtggcccggag
gcggatgagtacagcaatgcaaccacaaagtctcagggagggccagcggagtcggctttc
gaagcgggggaagaggcactgcaaggcgccaggtcttcggagaaagcggagccgttccag
gcggagagcctggaggacaccgacgacgagggcaggctcagagcaccgcgccagagctct
ccgccggcatcgcagcgcccgggagaagctctggagacactgccaaactctgccacggaa
ggggatgcctctacctcagctgcctccacctcagtccttacaggggagagctcctacaag
tcaaaagaaagttcagagaaaatctccagtgtgccaagtacgagctcgacgccagccgca
ggctcgcagaaagccaactctcttcagagcttgttcggcttctccgaggcggccagctcc
aggaacacgcgagacagctccttgaggaaaaagaaagcggcaaacttgaacaacatcatc
caccgcttggagaaggctgcgagtcgagaagaggccgtcgagtgggagttttga
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integrated database retrieval system
