Rissa tridactyla (black-legged kittiwake): 128913171
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Entry
128913171 CDS
T09443
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1
KO
K10864
DNA mismatch repair protein PMS1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtd03400
]
128913171 (PMS1)
DNA repair and recombination proteins [BR:
rtd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
128913171 (PMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HMG_box
HMG_box_2
HATPase_c
HMG_WDHD1
HMG_box_5
CHDNT
Motif
Other DBs
NCBI-GeneID:
128913171
NCBI-ProteinID:
XP_054066263
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Position
7:complement(37009033..37057805)
Genome browser
AA seq
933 aa
AA seq
DB search
MKQLPAETIRLLSSSQVITSVVSVVKELIENSLDASATNIDIKLENYGFNKIEVRDNGSG
IKVADVPVMAIKHYTSKISSSEDLERLTTYGFRGEALGSICCISEVLITTKTAADDFSTQ
YALDSNGHVTSKKPSHLGQGTTVTVLKLFKNLPVRKQFYSTTRKCKEELKKVQDLLVAYG
IIKPDLRITLTHNKAVIWQKTRVSDHKMACMSVLGTAVMGSMVPFQHCCEDPEINLSGFL
PKAESDASLTSLSSSERSFVFINNRPVHQKEILKLIRQYYSLATHKDCTRLYPVFFLNIT
VPASAVDVNLTPDKTQVLLHYKESVLLAVENVLKSLYGPLPATVPGESNKTDVTSEDMFV
YRTEQTDVVVNETGPSGNDDVHAHTSFLSFSSDVQNCQAGKNTEICLNHQTFCGDNVHSC
RDKKEVSKSDAFPDNSLSLLCEEEQNGQNMTDIQSNSVPVDPQSKKADEHILSSDNIDET
EKNEEALVPKDLPEISADNWSMGSGFKNHLGDNLEPVKILIPEVGGTSNKQNEHSGEQSN
DPQISNQSIKKRNVINDKFGHVTAYDLISSRIIRKPKSAIGFFTQECRPKLITDNPKTSM
EDILLKIEEQWKNLNEEEKKNYEIKAAKDLERYNREVKKATGQTVHRPTKEAEKQKPKLK
ISPSDQQKLDKIFHAQTEKKRKPEQPTKIVTVPFSLSSCRRQLQRHEKNNSDEQKLFLIR
RQSFPDVWIFATEKKLMLLNPYRLEEALLHKRLLMNHKLPVEKLDKPIVLMDSLLGGSQY
MAALYKMQKDYQSFNGSGYLSDPRLVANGFQIKVIEGASATESHLEIEGMANCLQYYGIS
DLKEILNAVVHGNAKEVHECRPLKVINYLEGEAVRLARQLPLHLSKEDVQNTIYRMKQQL
GKENKGCVHGRPFFHHLTDIPEVDKHGSMEITQ
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagctgccagcagaaactattcgtctcctttcaagttctcaggtgatcacatca
gttgtcagcgtggtgaaggagcttatagaaaattccttggatgccagtgccacaaatatt
gatattaaactggagaattatgggtttaacaaaatagaagtaagagacaatggcagtgga
atcaaggttgctgatgtgccagttatggcaattaaacactacacctcaaaaataagctct
tctgaggaccttgaaaggttgacaacatacggtttccgtggggaggctttgggatcaatt
tgctgcatatcagaggttttgatcacaacaaagacagctgccgatgatttcagcactcag
tatgctttggatagcaatgggcatgtaacttctaaaaagccttcccatcttgggcaaggt
actacagtaacagtcctgaagctgtttaagaatcttcctgtaagaaagcagttttactca
acaactagaaaatgtaaggaagaactgaaaaaagtccaagatctactggtagcatatggt
atcataaaaccagacctgaggataaccttaacgcataataaggcagttatttggcagaag
accagggtgtcggatcacaaaatggcctgtatgtcagttctgggaacagccgttatgggc
agtatggtaccttttcaacactgctgtgaagatcctgagataaatctttctggatttctc
ccaaaagctgagtcagacgcttctttgacaagtctttcaagttcagaaaggagtttcgtt
tttataaataatcgtccagttcatcagaaggaaatactgaagttaattcgacagtactac
agtctggcgacgcacaaggactgtactcgtttatatcctgttttctttttgaatattact
gtacctgcctctgctgtggatgtgaatttaacacctgacaaaactcaagttttactgcat
tataaggaatctgtcttacttgctgttgaaaacgtgttgaaatcactgtatgggccacta
cctgctacagtccctggtgaaagtaataaaacagatgttacctcagaagacatgtttgtt
tatagaacagaacaaacagatgtggttgttaatgaaacgggaccatctggaaacgatgat
gtacacgctcatacttcattcctttcattcagcagtgatgtgcaaaactgtcaagcagga
aaaaacacagagatctgcttaaatcatcagacgttttgtggtgataatgtacatagttgc
cgggacaaaaaagaggtttctaagagtgatgccttcccagacaattccttaagtttattg
tgtgaggaggaacagaatggacagaatatgaccgatattcaaagcaacagtgttcccgtg
gacccccagtcgaaaaaagccgatgagcatattttgagttctgataatattgacgaaaca
gaaaaaaatgaggaagctttagtccctaaagacttacctgaaatctctgctgataattgg
agtatgggaagtggatttaaaaaccatctaggagacaacctggaacctgttaagattttg
attcctgaagttggaggaacaagtaataagcaaaatgaacatagtggtgaacaaagcaat
gatccacaaatctcaaatcaaagcataaagaaaagaaatgtgataaatgataaatttgga
catgtgacagcttatgacttaattagtagtagaataataaggaaaccaaagtctgcaatt
ggatttttcactcaagaatgtcgtccaaaattgataactgataatccaaagaccagcatg
gaggacatccttctgaaaattgaagagcagtggaagaatttgaatgaagaggaaaaaaag
aattatgaaataaaagctgctaaagacctggaacggtacaacagagaggtcaagaaagct
acggggcagacagtgcaccgaccaacaaaggaggcagaaaaacagaaacccaagctgaag
atttcgccatccgaccagcagaagcttgacaagatatttcatgctcaaactgaaaagaag
cggaaacctgaacagcctacgaaaattgtgacagtgcctttttctctgagttcctgtaga
cgtcagcttcagagacatgagaaaaataattcagatgaacagaagcttttcctgatccgt
cgtcagagttttcctgatgtctggatatttgctactgaaaaaaagttaatgttgctgaat
ccatatagattggaagaagccctgctacataaaaggttactgatgaatcataagcttcca
gtagagaaactggacaagccaattgtgttaatggacagtcttcttggtggatctcaatat
atggctgctctttataaaatgcagaaggattaccaaagtttcaatggatcagggtatttg
tcagatccaaggcttgtagcaaatggattccagataaaagtgatagaaggtgcttcagct
acagaaagtcacctggaaatagaagggatggcaaattgtctgcaatattatggtatttct
gatttgaaagaaattctgaatgcagtagttcatggaaatgcaaaggaagtacatgaatgt
aggcctctcaaagtgataaattacttggagggagaagcagtacgtttagctcggcagctg
cccttacatttgtcaaaagaagatgtacaaaacacaatttacaggatgaagcaacagctt
ggaaaggaaaataaaggctgtgttcacggtcgtcctttttttcatcatttaacagatatt
ccagaagttgacaagcacggctccatggaaattactcagtaa
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