Rissa tridactyla (black-legged kittiwake): 128913286
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Entry
128913286 CDS
T09443
Symbol
ATF6
Name
(RefSeq) cyclic AMP-dependent transcription factor ATF-6 alpha isoform X1
KO
K06496
selectin, platelet
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128913286 (ATF6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtd04515
]
128913286 (ATF6)
04090 CD molecules [BR:
rtd04090
]
128913286 (ATF6)
00536 Glycosaminoglycan binding proteins [BR:
rtd00536
]
128913286 (ATF6)
04091 Lectins [BR:
rtd04091
]
128913286 (ATF6)
Cell adhesion molecules [BR:
rtd04515
]
Lectins
Selectins and C-type lectins
128913286 (ATF6)
CD molecules [BR:
rtd04090
]
Proteins
128913286 (ATF6)
Glycosaminoglycan binding proteins [BR:
rtd00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
128913286 (ATF6)
Lectins [BR:
rtd04091
]
C-Type lectins
Selectins
128913286 (ATF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sushi
Lectin_C
EGF
EGF_2
hEGF
EGF_Teneurin
EGF_CA
EGF_3
DUF5516
Motif
Other DBs
NCBI-GeneID:
128913286
NCBI-ProteinID:
XP_054066507
LinkDB
All DBs
Position
8:complement(28571092..28665372)
Genome browser
AA seq
982 aa
AA seq
DB search
MLCAPGGSVSTAARRGPDAPGAAGSWARCVCGADMGAAAGRLQSAGRTWALSSRGICYLG
IAAIAWGTVTQLEVGAWTYHYSDQGDYTWEQARNYCQTFFTDLVAIQNKQEIEYLNETLP
FHGRYYWIGIRKLGGTWTWVGTRKALTKEAENWAAGEPNNRRSNQDCVEIYIKRQRESGK
WNDEPCNRRKKALCYQASCQPFPCSQHGECVETIGSYRCECYPGFHGPECEDVVQCAKLE
PMGVRMNCSHPYGDFSYNSTCVFGCQEGFERRGADTLRCLASQQWSAETPTCTAIACPVL
SAPDRGEVNCSHRHGYFAFGSTCAFSCQTGFALMGPESRECTATGTWTGEAPHCEAITCP
VLSAPEQGELNCSHLHGEFAFGSTCVFSCRTGFELTGPESHECTATGTWTGEAPRCKAIA
CPVLSAPDRGKVNCSHHHGDFAFGSTCAFSCQTGFVLMGPESRECTATGTWTGDAPRCEA
VTCPVLNAPDQGKMNCSHLHGGFAFGSMCAFSCQMGFVLMGSESRECMATGTWTEDSPHC
EAITCPVLNAPDRGEVNCSHRHGDFAFGSTCAFSCQTGFVLMGPESHECTATGTWTGDAP
RCEAITCPVLSAPDQGELNCSHLHGDFAFGSTCVFSCRTGFELTGPESHECTATGTWTGE
APRCKAIACPVLSAPDRGEMNCSHHHGDFAFGSTCAFSCQAGFALMGPESRECTATGTWT
GDAPQCKAIACPVLSAPDQGGLNCSHLHGDFAFGSTCAFSCQTGFALMGPESRECTATGN
WTGDAPHCEAIKCSTLATPKMGQAACSHLHGDFAFGSMCVFSCQTGFVLMGPESRKCMST
GTWTGDAPHCKAISCPVLDPPSRGQLSCSHLHGNFTYNSTCTFSCEEGFVRMGAEVLRCT
ATGNWTRHPPVCAEDGAPFLKQVLAYSSGTALAVAGIVLSGTLIALLAKRLSDRDEKKKL
LNPTSDLGSPGVFTNAAYDANL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgctctgcgcacccggaggaagtgtgagcaccgctgcccgccgagggccagacgcccct
ggtgctgccggcagctgggcaaggtgcgtctgtggcgccgacatgggtgctgctgcggga
agactgcagtctgctgggaggacgtgggctctgagctctcgtggcatctgctacctgggc
atcgctgccattgcatggggcacagtgacacagttagaggtgggtgcctggacataccac
tacagtgaccaaggggactacacgtgggagcaggccaggaactactgccagaccttcttc
accgacctggtggcaatccagaacaagcaagagattgagtacctcaatgaaaccctgccc
ttccatgggcgctactactggattggcatccgcaagctgggtggcacctggacctgggtg
ggcaccaggaaggcgctgacaaaggaagcagagaactgggcagccggagagcccaacaac
cgccgctccaaccaggactgtgtggagatctacatcaagcggcagcgtgagtcgggcaag
tggaacgatgagccctgcaaccggaggaaaaaggcactgtgctaccaggcctcctgtcag
cccttcccatgcagccagcacggtgagtgtgtggagaccatcgggagctaccgctgtgag
tgctaccccggcttccatggccctgagtgcgaggacgttgtgcagtgtgccaagctcgag
cccatgggagtgcgcatgaactgcagccatccctatggagacttcagctacaactctacc
tgcgtgttcgggtgccaggaggggtttgagcggagaggggcagacacgctgcggtgcctg
gcttcccagcagtggtcggcagagacccccacctgcacagccattgcctgcccggtgctc
agcgctccagaccgaggagaggtgaactgctcccaccgccacgggtacttcgcctttggt
tccacgtgtgccttctcctgccagacagggtttgcactgatgggaccagagagccgcgag
tgcacggccacaggaacatggacaggggaagccccacactgtgaagccatcacctgccca
gtgctcagcgctccagagcagggagagctgaactgctcccatctccatggggaattcgcc
tttggctccacatgtgtcttctcctgccggacggggtttgaactgacaggaccggagagc
catgagtgcacagccacagggacctggactggggaggccccacgatgcaaagccattgcc
tgcccggtgctcagcgctccagaccgaggaaaggtgaactgctcccaccaccatggggac
tttgccttcggctccacatgtgccttctcctgccagacagggtttgtgctgatggggcca
gagagccgcgagtgcacggccacagggacctggactggggatgccccacgctgtgaagct
gtcacctgcccggtgctcaatgctccagaccaaggaaagatgaactgttcccacctccat
gggggctttgcctttggctccatgtgcgccttctcctgccagatgggatttgtgctgatg
gggtcagagagccgcgagtgcatggccacaggaacatggactgaagactccccccactgt
gaagccatcacctgcccagtgctcaatgctccagaccgaggagaggtgaactgctcccac
cgccacggggacttcgcctttggctccacgtgtgccttctcctgccagacagggtttgta
ctgatgggaccagagagccacgagtgcacggccacagggacttggactggggatgcccca
cggtgtgaagccattacctgcccagtgctcagcgctccagaccagggagagctgaactgc
tcccatctccatggggacttcgcctttggctccacatgtgtcttctcctgccggacgggg
tttgaactgacaggaccggagagccatgagtgcacagccacagggacctggactggggag
gccccacgatgcaaagccattgcctgcccggtgctcagtgctccagaccgaggagagatg
aactgctcccaccaccatggggacttcgcctttggctccacatgtgccttctcctgccag
gcagggtttgcactgatggggccagagagccgcgagtgcacggccacagggacctggact
ggggatgccccacaatgcaaagccattgcctgcccggtgctcagtgctccagaccaagga
gggctgaactgctcccacctccatggggactttgcctttggctccacgtgtgccttctcc
tgccagacagggtttgcactgatgggaccagagagccgcgagtgcacggccacagggaac
tggactggggatgccccacactgtgaagctatcaagtgctcaacactggccacccccaag
atgggccaggctgcctgctcccacctccacggggactttgccttcggctccatgtgtgtc
ttctcctgccagacagggtttgtgctgatggggccagagagccgcaagtgcatgtccaca
gggacctggactggggatgccccacactgcaaagccatcagctgcccagtgctggacccc
cccagcagaggccagctgagctgctctcacctgcatgggaacttcacatacaactccaca
tgcacgttttcctgcgaggaggggtttgttcggatgggagcagaggtgctccggtgcaca
gccacagggaactggaccaggcatcccccagtctgtgcagaggatggtgcccccttttta
aagcaagtcctggcttacagcagtggcacagctctggcagtagcgggcatcgtgctctca
gggacgctcattgccctcctcgccaagcggctcagtgacagagacgagaagaagaagctc
ctgaaccccaccagtgacctaggatcgcctggtgttttcaccaacgcagcgtatgatgcc
aacctgtaa
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