Rissa tridactyla (black-legged kittiwake): 128913325
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Entry
128913325 CDS
T09443
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128913325 (RBBP6)
Enzymes [BR:
rtd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128913325 (RBBP6)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
U-box type E3
128913325 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
128913325
NCBI-ProteinID:
XP_054066601
LinkDB
All DBs
Position
8:7918685..7950269
Genome browser
AA seq
1794 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKATSKTYVMTPKSHKILETAFRSRTEPVSGTSKAIDDSSA
SISLAQLTKTANLAEANASEEDKIKAMMTQSGHEYDPINYMKKPLGPPPPSYTCFRCGKP
GHYIKNCPTNGDKNFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEA
YAIGKKEKPPFLPEDPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTA
LLESEEHTCPTCHQTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQIQQQQQQQQQPP
PPPPPPPPLMRQTITRNLQPLLRPPISRQQDPLMIPLASLASRSALSSLGPGQSSVAAGL
PVNPSSVVVSDLPPAVSLSLRGEKPDGPFRLGFFYSDADTVLPPAALVTAAELSKSSPLS
ISSLLEEKGYQVPVLRQPALPSLLGPQGQSIPTTGHPMRASTIRSAGGRPGWELANRGRP
HGDRAQRTQAPSLPASTPVFVPVPPPPLYPPPPHALPLPPGVPPPQFPPQFPPGQPPSAG
YSVPPPGYPPAPANMSSAWVPTAVPTAHSNAIPTTQAPPLSREEFYREQRRLKEEEKKKS
KLDEFTNDFAKELMEYKKIQKERRRSFSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYS
RSFSRSHSRSYSRSPPYPRRGKGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPVFR
GQSPTKRTIPQGEGEREYFNRYREVPPYDVKAYYGRSVDFRDPFEKERYREWERNYREWY
EKFYKGYVVGAQPRPPVNRENFSPDRFGPPGTRRENSPYARGRREEYPGGQSHRNRNIAG
NYPEKPSGRESHGIKDPTKSKEKEVENPLGDGKGNKHKKHRKRRKGDENEGFPNAELLEG
ARKPREPVTTEDVKTDSLFMLPSRDDATPVRDEPMEADSIAFKPVSEKEKKEKDKPKAKV
DKTKRKVEVAVPPKKDNVTKPAKASQEKVDTDREKSPRTEPPVKKVKEELPKTDSVKTSS
SQKEEKTAGTPRKVHPKVTKDHPETRPAKEEKAKKDHPKETKSEKPSNKEDKSKKPAEKS
KPSDAKPEKRKRKADEKADKEHEATSVKASKAEPAESKTSPKGKTEPDGEKGERTPEKDK
SAFLNNPAKKIKLNRETGKKIVSGENVPPAKEPVEKPEPSSSKVKQEKAKGKVRRKVTAA
DGSSSTLVDYTSTSSTGGSPVRKTEEKPDTKRTVIKTMEEYNNDITAPAEDVIIMIQVPQ
SKWDKDDFESEEEDIKSTQVPTNIGKPASVIKNVSAKPANPVKHNEKETEPLEKTQKTTK
EASYESSQHDAKSSKSSMLNEKGKTKDRDHSLSDKDTSEKRKSSVQPEKDHSERASEQGN
GKNISQSSKDSRSSEKHDTGRGSTAKDFTPNRDKKSDHDGNRDHSSSKRRDEKSELARRK
DSPSRNRESASVQKSKPREERAEPSKKAVGDAKRSSYSPPRERKQTDHKAAHDSKRTLEE
HKPPDKNVGKEKEKHVAEVKSNKEKEPGVTKPPVKQESPDVKNEKENVTGQNDKNVVKPK
PQVSTSSRLSSDLTRETDEAAFVPDYNESDSESNVSAKDEEAAGKNPKEPKEKAVEKVKE
ETTAPAAVEQPEASRSQSQSSPSVSRSRSQSPSESQTRSHSSSASSGESQDSKKKKKKKE
KKKHKKHKKHKKHKKHVGNETELEKSQKHKHKKKKSKKSKDKEKDDQKVKSVTT
NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcgtccattacaagttctcctctaagctgaactatgatacggtcaccttcgac
ggcctccacatctccctctgcgacctcaagcgccagatcatgggccgcgagaaactgaag
gcggccgactgcgacctgcagatcaccaacgcccagaccaaagaagaatacacagatgat
aatgccctgattccgaagaactcatcggtaattgttagaagaatccctattggaggagtt
aaagctaccagcaaaacgtatgttatgactcctaaatcgcacaaaatcctagaaactgct
ttcagaagtcgaactgagccagtgagtggaacatcaaaagcaattgatgactcttctgca
tctatttctctggcccagcttactaagactgccaatctggctgaagccaatgcttccgaa
gaagataaaataaaagctatgatgacacagtctggccatgaatatgatccaatcaattac
atgaagaaacccttgggtccacctccaccgtcatacacgtgctttcgttgtggaaaacct
ggccactatataaagaattgcccaacaaatggggacaaaaattttgagtctgttcccaga
attaaaaagagcacgggaattccaaggagtttcatgatggaggtgaaagatcccaataca
aagggtgctatgctgacaaacactggaaaatatgccataccaactattgatgcggaagct
tatgctataggaaagaaggaaaagcctccctttttaccagaggacccgtcctcctcctca
gaagaagatgatcctattccagatgagttgttatgtctcatttgtaaagatataatgact
gacgcggttgttattccctgctgtggaaacagttattgtgacgaatgtattagaacagca
ttactggaatcggaggaacatacgtgcccaacatgtcatcaaacagatgtttctcctgat
gctttaattgccaataagttcctacgccaggctgtgaacaacttcaaaaatgaaactggc
tacacaaaaaggctccgtaagcagattcagcagcagcaacagcagcagcagcagccgcca
ccgccaccaccacctccaccacccctaatgagacaaacaataacacgcaaccttcagcct
ctgctccggccacccatttccagacagcaggatccactaatgataccattagcttctctg
gcttctcgttctgctttgtcatcgttgggccctggtcagtcatctgtggcagctgggctg
ccagtaaatccgtcttctgttgttgtctctgatcttcctccagcagtgtccctatccctc
cgtggtgaaaagccagatggaccttttcgtttggggtttttttatagtgatgctgatact
gttttacctcccgctgctctcgtgactgccgctgaactttctaaatcttcccctctgtca
atcagcagtttgttggaagagaagggctatcaggttcctgtactaagacaaccagcgtta
ccaagtcttctgggcccccaaggacaatcaatacccacaactggtcatccaatgagagcc
agtacaattcgctcagcaggtggcagaccaggctgggagcttgcaaatcgaggacgccct
catggtgaccgtgcccaaaggactcaggccccatcactaccagcatcaacaccagtcttt
gtgcctgtgcctccaccgcccttgtatcctccaccaccccatgcacttcctcttccgccg
ggggtaccgccaccacagtttcctcctcagttcccacctggtcagcctccatctgctggg
tactctgtcccccctccaggatatcccccagctcctgcaaatatgtcatcagcttgggta
ccaacagcagtaccaacggctcattcaaatgccatcccaacgacacaagcacctccctta
tctagggaggagttttacagagaacaacggagacttaaagaggaggaaaagaaaaagtcc
aaacttgatgagtttacaaatgattttgctaaggaattgatggaatataaaaagattcaa
aaggagcgtaggcgttcgttttccaggtccaagtccccctatagtgcttcatcttactct
agaagttcgtatacctactcgaagtcaagatcaggttcttcccgttctcgctcctactct
cgatcatttagccgttcccattctcgttcctactcacgatcaccaccatatccaagaaga
ggcaaagggaagagtcgtaattatcgttctaggtcaaggtcacatggttatcaccgttca
aggtcaaggtcacccccgtacagaaggtaccactcacggtcaaggtctccagtatttaga
ggccagtctcccactaaacggactatacctcaaggggaaggagaaagggagtattttaac
agatacagagaagttccaccatatgatgtgaaagcatactatggcagatcagttgacttt
agagatccatttgaaaaagaaagatacagagaatgggaaaggaattatagagaatggtat
gaaaagttttacaagggctatgttgtcggcgctcaacctcgtccgccagtaaatagagag
aacttttcaccagataggtttggtccacctgggaccagacgagagaattcgccgtatgct
cggggacgtagggaggagtatccaggtgggcagagccacagaaatcgtaatatagcagga
aattaccctgaaaaaccttctggaagagagagccatggcattaaagatcctacaaaatca
aaagagaaggaggtggaaaatccactgggagatggcaaaggaaataaacataaaaaacat
cggaagagaagaaaaggggatgagaatgaaggatttcctaatgccgagttgttagaaggt
gcaagaaaaccaagagagccagtgacaacagaagacgttaaaacggactctctgttcatg
cttccaagcagagatgatgccacccctgtgagagatgaacctatggaagcagattctatt
gctttcaaaccagtgtctgaaaaggagaaaaaagagaaggataagccaaaagcaaaagtg
gacaagacaaagcggaaagtagaagtggctgttcctcctaagaaagataatgtaacaaaa
ccagctaaagcttcccaagagaaggtggacacagatcgtgaaaaatctcctcgaacagaa
cctcctgtgaaaaaagtgaaggaggagttgccaaagacagacagtgttaaaacatcttcc
tctcaaaaggaagaaaagactgctggtaccccacggaaagttcacccaaaagtgacgaaa
gatcacccagaaacaagaccagccaaggaagaaaaggcaaagaaagaccatccgaaagaa
accaagtcagagaagccctccaacaaagaggacaaatcaaaaaagcctgctgaaaaaagc
aaaccttctgatgcaaaacctgaaaaaagaaaaagaaaagcagatgaaaaggctgataaa
gaacatgaagccacttctgtaaaggcctctaaagcagaacctgctgaatcgaaaacatcg
ccgaaggggaagactgagccggatggtgaaaaaggagagcgaacgccagaaaaggataaa
tccgcttttcttaacaaccctgcaaaaaagattaaacttaaccgagaaaccggcaaaaag
attgtgagtggagaaaatgtgccacctgcaaaagaacctgttgagaaacctgagccgagc
agcagcaaggttaaacaagaaaaagcaaagggaaaagtgagaagaaaagtaacagcagct
gatggatctagttcaactcttgtagattacaccagcactagttctactggcggaagcccc
gttagaaagactgaagaaaagccagatacaaaacgaactgtcattaagaccatggaggag
tataataatgatataacagcgcctgctgaagacgtcattattatgatccaagtccctcag
tcaaagtgggataaagatgactttgaatctgaagaggaagacattaaatctacccaggtg
cccacaaacataggaaaacctgctagtgttataaaaaatgtgagtgcgaagccagcaaac
cccgtaaaacacaatgaaaaagagacggagcctttggagaaaacacagaaaactacaaaa
gaggccagttatgaaagctcccagcatgatgcaaaaagttcaaaaagttcaatgttgaat
gaaaaaggaaaaaccaaagaccgggatcattctttgtcagacaaggacacttctgagaag
agaaagagcagtgttcagccagaaaaagaccactcggaacgtgcatctgagcaaggaaat
ggaaaaaatatttctcaatcttccaaagacagcagatcttcagagaaacacgatactggc
cgtgggtccactgctaaagactttactcctaaccgagacaaaaaatctgaccacgatggc
aacagagatcattctagttccaagcgtagggatgaaaagagtgaattagccaggagaaaa
gactccccttctcggaacagagaatctgcatctgtacagaaaagcaagccgagagaggaa
cgagcagagccgtccaaaaaggccgttggagatgccaaaaggagcagctacagccctccg
cgggagcggaagcagactgatcacaaagctgctcacgattccaagcgtacattggaggaa
cacaaacctccagataaaaatgtaggaaaagagaaagagaagcatgtagcagaagtaaag
agcaataaagagaaagagccaggtgttactaaaccacctgtgaaacaagaatcgccagat
gtaaaaaatgagaaagagaacgtgactggacaaaacgataaaaacgtcgtcaagcccaag
cctcaggtaagcacctcctcacggctctcttctgatctaactcgagagactgatgaggct
gcgtttgtaccagactacaacgaaagtgacagtgagagtaatgtatctgcaaaagatgag
gaagctgcaggaaaaaatccgaaagaaccgaaagaaaaagctgttgaaaaggtgaaagag
gagacgacagcacccgctgcagttgagcagcctgaagccagcagaagtcaaagtcagagc
agccccagcgtgagccgcagccgtagtcaaagcccttccgagagtcagactcgaagccac
agcagcagtgccagctcaggagagagtcaagacagcaagaaaaagaaaaagaaaaaagag
aagaagaagcacaagaagcataagaaacacaagaagcataagaaacacgtgggaaacgaa
acggaattggaaaagagccaaaaacacaaacacaagaagaaaaaatcgaagaagagcaaa
gataaagagaaagatgaccaaaaagtgaaatctgtcactacatag
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integrated database retrieval system
