Rissa tridactyla (black-legged kittiwake): 128913349
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Entry
128913349 CDS
T09443
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04510
Focal adhesion
rtd04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128913349 (LAMC1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128913349 (LAMC1)
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
Laminin_B
Motif
Other DBs
NCBI-GeneID:
128913349
NCBI-ProteinID:
XP_054066689
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All DBs
Position
8:complement(27878873..27945804)
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AA seq
1602 aa
AA seq
DB search
MGGGGERLARALWLAALWLWLPGRCGGAMDECTEERSGRPQRCMPEFVNAAFNATVLATH
TCGTPAEEYCVQTGVTGVTQSCHLCDAAQPHLRHGAAFLTDYNSPADATWWQSRTMLAGV
QHPTAVNLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWVPYQYYSGSCESTYH
KVNRGFIRTGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTAT
DIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNELGKLVCNC
KHNTFGVDCEKCLPFFNDRPWRRATAESANECLPCDCNGRSQECYFDPELYRSTGHGGHC
TGCSDNTDGAHCERCRDSFYRLGSEEGCLPCSCNPVGSLSTQCDSYGQCSCKPGVMGEKC
DRCQPGFHSLSEAGCRPCSCDPAGSTGECNVETGRCACKDNVEGFHCERCKPGFFHLDSS
NMRGCTPCFCFGHSSVCTNAVGYSIYSITSSFQFGEDEWRAEQRDGSEVLLQWSAETQDI
SVISDSYFPIYFVAPRKFLGNQVLSYGQNLTFSFRVDRRDTRLSAEDLVLEGAGLRVSVP
LIAQGNPYPSENAVTYTFRLHEATDYPWRPALTAFEFQKLLHNLTSIKIRGTYSERSAGH
LDDVTITSARPGPGVPVAWVESCSCPVGYEGQFCERCSSGYRRETPSLGPYSPCVPCACN
GHSETCEPETGMCNCRDNTAGSHCEKCSDGYYGDATAGTASDCQPCPCPGSSSCAIVPRT
KEVVCTSCQAGTTGKRCELCDDAYFGDPLGENGAVRPCRLCQCNDNIDPNAVGNCDRQTG
ECLKCIYNTAGFYCDRCKDGFFGNPLAPDPADKCRACHCNPYGTVNQQTSCNQVTGQCEC
LSHVTGRDCSACEPGFYNLQSGRGCERCNCHALGSTNGQCDIRTGQCECQPGVAGQRCDR
CEVNHFGFGSEGCKPCDCDPEGSRSLQCQENGRCECKEGFVGNRCDQCEENYFYNRSWPG
CQECPPCYRLVKDKVAEQRERLQELENLIANLGTGEDTVTDQAFEERLKQAERDVMELLQ
EAQNSKDVDQGLMDRLKNINSTLTSQLNRLRNIQGTVQETENLAEQARVRVEDTEDLISL
ASNMLEKAKMAADNVSITPPESSGDPNNMTLLAEEARKLAERHKKEADEIVRIAKAANDT
STEAYQLLLKTLAGENQTAKDIDELNQKYNQARNISRDLEKQASKVLAEAEEAGNKALQI
YANLTSLPTVDSTGLENEANKIKKEAEELDQLIARKLKDYEDLREDMKGKELEVKNLLEK
GKTEQQTADQLLARADAAKALAEEAARKGNGTLQEANTILSNLKDFDKRVNDNKTAAEEA
LKKIPAITQTIAEANNKTRQAELALGNAAADAREAKAKADDAEKIAGSVQKSAAATKAEA
DKTFADVTGLAREVDDMMKQLQDAEKELKRKQDDAEQDMMMAGMASQAAQEAEDNARKAK
NSVNSLLAIINNLLDQLGQLETVDLNELNEIEGTLNSAKDQMKEKDLDQKVSFLEREARK
QDDAIQAYNRDIEEILKDISNLEDIKKTLPSGCFNTPSIEKP
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atggggggcggcggcgagcgcctggcgcgggcgctgtggctggcggcgctgtggttgtgg
ttgcccgggcggtgcggcggcgccatggacgagtgcacggaggagcggagcggccgcccg
cagcgctgcatgcccgagttcgtgaacgccgccttcaacgccacggtgctggccacccac
acgtgcgggacgccggccgaggagtactgcgtgcagaccggcgtcaccggcgtcacccag
tcctgccacctctgcgacgccgcccagccccacctgcgccacggcgccgccttcctcacc
gactacaacagcccggccgacgccacctggtggcagagccgcaccatgctggccggcgtg
cagcaccccaccgccgtcaacctcaccctccacctgggaaaggcctttgacatcacgtac
gtgcgtctgaagtttcacaccagtcggccggagagctttgcaatctacaaacgcaccagg
gaagacggcccatgggtgccctaccagtattacagtggctcctgtgagagcacatatcac
aaagtcaaccggggctttattcggactggggaggatgagcagcaggctctctgcacagat
gagttcagtgacatctcccctctcactgggggcaacgtggcgttctcaacactggagggg
cgtcccagtgcctacaactttgacaacagccctgtgctacaggagtgggtgacggctaca
gatattagagtgaccctcaatcgtctgaacacctttggagatgaagttttcaatgatcca
aaagttctcaagtcttactactatgcgatttctgattttgctgtgggtggtagatgcaaa
tgtaacgggcacgcaagcgagtgtgtgaagaatgagcttgggaagctggtctgcaactgc
aaacacaacaccttcggggtcgactgtgaaaagtgtcttcctttcttcaatgaccgtcca
tggaggagagcgacagcagagagcgccaatgaatgcttgccttgtgactgcaacggaagg
tcgcaggagtgctacttcgaccctgagctgtaccgctccactggccacgggggccactgc
acgggctgctcggataacactgacggtgcccactgcgagaggtgcagggacagcttctat
cgcctgggcagcgaggagggatgcctgccctgcagctgcaaccctgtcggctccctcagc
acgcagtgcgacagctacggccagtgcagctgcaaacccggcgtgatgggtgagaagtgt
gaccgctgccagccgggtttccactccctctctgaagctgggtgcaggccctgttcttgt
gatccggctggcagcacaggggaatgcaatgtcgagacaggacggtgtgcatgcaaggac
aacgttgaaggcttccactgcgagagatgtaaacctggttttttccatctggattcctcc
aatatgaggggctgtaccccctgcttctgctttggtcactcttcagtctgcaccaatgcc
gtcggctacagtatctatagtatcacctccagcttccagtttggagaggacgagtggcgt
gctgagcagcgtgatggctctgaagtcttacttcagtggagtgcagagacccaggatatc
tctgttatctcggacagctacttccccatctattttgttgcgccacgcaagttcttgggc
aaccaggttttgagttacgggcaaaacttgaccttctccttccgtgtggacagacgggac
acgcgcctctctgcggaggacctggtgctggaaggggctgggctgagagtgtcggtgcca
ctcattgcccagggcaacccctaccccagcgagaatgcagtgacctacaccttcaggctt
catgaggctacagattacccatggaggcctgctcttacggcatttgagttccagaagctt
ctccacaacttgacttccatcaagatccgcgggacgtatagcgagagaagtgctggccac
ctggatgatgttaccatcacaagcgctcgccctggaccaggtgtgcctgtggcctgggtg
gagagctgctcctgtcccgtgggatacgaggggcagttctgtgagcgctgctcatctgga
taccggcgagagacgccgagccttgggccctacagcccctgcgtgccttgtgcttgcaac
gggcacagcgagacatgtgagcccgagacaggcatgtgcaactgcagggataatacggcg
gggtctcactgtgagaagtgcagcgacgggtattatggggatgcgacagcgggcacggcc
tcagactgccagccctgcccgtgcccaggcagctcgagctgtgccatcgtgccccgcacg
aaagaggttgtgtgcaccagctgccaggctggcactacaggtaagaggtgcgagctttgt
gacgatgcctatttcggagacccactgggcgaaaacggtgctgtgaggccttgccgcctc
tgccagtgcaacgacaacatcgatcccaatgccgtgggcaactgcgaccgccagacgggc
gagtgcctcaagtgcatctacaacactgccggcttctactgcgaccgctgcaaagatggc
ttcttcgggaaccccctggcccccgatccggccgacaagtgcagggcttgtcactgcaat
ccctatggcactgtgaatcagcagacgagttgcaatcaagtgactgggcagtgcgagtgc
ctgtctcacgtcacgggaagggactgcagcgcctgtgagcctggcttctacaacctccag
agcggacgcggctgtgagaggtgcaactgccatgcgctgggctccaccaacggccagtgt
gacatccgaaccgggcagtgcgagtgccagcctggcgtcgctggacaacgttgcgacaga
tgcgaggtcaaccacttcggctttggctccgaaggctgtaaaccctgcgactgtgatccc
gagggttcgcgctccctgcagtgccaggagaacggtcgctgtgagtgcaaggaaggcttc
gtagggaaccgctgcgaccagtgtgaagagaactatttctacaaccgctcatggccgggc
tgccaagaatgtccgccctgttacagattggtgaaagacaaggtggcagaacaacgagag
aggttgcaggagctggaaaatcttatagcaaatctgggtacgggagaagacaccgtaacc
gatcaagcctttgaagagaggttgaagcaggcagaaagagatgttatggaattgctccag
gaagcacaaaacagcaaagacgtagatcagggcctcatggatcgcctcaaaaacatcaac
agcacactaacgagtcaactcaacaggctcaggaacatccagggcacggtgcaggagaca
gagaacctggcggagcaagcccgggtgcgggtggaggacaccgaggacctgatcagctta
gcttccaatatgcttgagaaagcaaagatggcagctgacaatgtgtccattacacctccg
gagtcaagcggggaccctaacaacatgactctattggcagaagaggcccgtaagctggct
gaaagacacaaaaaagaagctgatgagattgttcgcatagccaaggcagcaaatgatact
tccacagaagcatatcaactgctgctgaagaccctggcgggagaaaaccaaaccgcaaag
gacattgatgagctcaaccagaagtataatcaagcaaggaacatttctcgagacctagag
aaacaggccagcaaggtgcttgcggaggcagaggaagctggaaacaaagccctgcagatc
tacgctaatctcaccagtctgcctacagtggattccacagggctagagaatgaagcaaat
aagatcaagaaggaagcggaggagctagatcagctaattgccaggaagctgaaagattac
gaggacttgagagaagacatgaaaggaaaggagctagaagtaaagaacctcttggagaaa
gggaagacagagcagcagactgcagaccagctcctggctcgagcggatgcagcaaaagcc
ctggctgaagaagctgctcggaagggcaatggcacactacaggaggctaataccattctc
agcaacctgaaagattttgataagcgggtgaatgataacaagacagcagcggaggaggcg
ctgaaaaagattcctgctattacacagaccattgctgaagccaacaataagacgcgccag
gcggagctggcgctgggcaatgctgctgccgatgcccgtgaagccaaggctaaagcagat
gatgctgagaaaattgctggttctgtccagaagagtgcagctgctaccaaagccgaagct
gacaagacttttgctgatgtgacggggctggcccgagaagtggatgacatgatgaagcag
ctgcaggacgcagaaaaagagctgaagcggaagcaggatgatgctgagcaggatatgatg
atggcaggcatggcctcacaggctgcccaggaggcagaagacaatgcaagaaaagcgaag
aactctgtgaacagcttgcttgccatcattaacaacctgctggatcaattagggcaactg
gagacagtggacttgaacgaactgaatgagatcgagggtaccctgaacagtgccaaagac
cagatgaaagagaaagacctggaccagaaggtgtctttcctcgagagagaagccaggaag
caagatgatgcgatacaggcctacaacagggacattgaagagatcctgaaggacattagc
aacctggaggacatcaagaagaccttgccctctggctgtttcaacaccccgtccattgag
aaaccctaa
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integrated database retrieval system
