Rissa tridactyla (black-legged kittiwake): 128913431
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Entry
128913431 CDS
T09443
Symbol
XYLT1
Name
(RefSeq) xylosyltransferase 1 isoform X1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
rtd00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
rtd01100
Metabolic pathways
Module
rtd_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
128913431 (XYLT1)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
128913431 (XYLT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtd01003
]
128913431 (XYLT1)
Enzymes [BR:
rtd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
128913431 (XYLT1)
Glycosyltransferases [BR:
rtd01003
]
O-Glycan biosynthesis
Glycosaminoglycan
128913431 (XYLT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
128913431
NCBI-ProteinID:
XP_054066972
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All DBs
Position
8:complement(10046168..10251054)
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AA seq
921 aa
AA seq
DB search
MVAAPCARRLARHSRSALVAALTVLLLQTLLVWNFSSLDAGEEQRGGGGREKRDRGGDQR
AHPQRRGPAAPHGKAMIEPPSPYTSLETQDGYFSHRPKEKMRTDSNNENSVPKDFENIDN
SNFAPRTQRQKHQSELVKKPLSKQKEHLRKKLEEEKMKENLLLGKNSNEVVQFSDHPRKN
SSSISNNNFKEIHMSPRQHHLKKNGNSSPELRYDQPPKCEVTGKEAISAMSRAKSKQCRQ
EIADVYCQHKHGKLMPEKVTRFCTLEGKANNNVQWDEDSVEYMPANPVRIAFVLVVHGRA
SRQLQRMFKAIYHKDHFYYIHVDKRSNYLHRQVLQFANQYPNVRVTSWRMATIWGGASLL
STYLQTMKDLMEMNDWPWDFFINLSAADYPIRTNDQLVAFLSRYRDMNFLKSHGRDNARF
IRKQGLDRLFLECDTHMWRLGDRRIPEGIAVDGGSDWFLLNRKFVEYVTFSNDDLVTKMK
RFYSYTLLPAESFFHTVLENSPYCDSMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPND
FKPADFHRFQQTARPTFFARKFEAVVNQEIIGQLDYYLYGNYPSGTPGLRSYWENVYDEP
DGVHTLSDVALTMYHAFSRLGLRRAETSFHAAGDNSCRYYPMGHPVSVHLYFLADRFQGF
LIRHHATNLAVSKLETLETWVMPKKVFKIASPPSDFGRLQFSEIGTEWDAKERIFRNFGG
LLGPTDEPVGMQKWGKGPNVTVTVIWVDPVNVIAATYDILIESSAEFTHYKPPLNLPLRP
GVWTIKILHHWVQVAETKFLVTPLTFSNWQPIKQEEAMKHHSGPPKNAYMEQSFQGLNPV
LNIPISAARVEQAKRNAGLVGAQLEAWVDSLVGSVWSAVDICSAGPTACPVMQGCAQTAW
SSLSPDPKSELGPVKPDGRLR
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggtggccgctccgtgcgcccggcggctggcacggcactcccgctcggcgctggtggcg
gcgctcaccgtgctgctcctgcagaccctcctcgtctggaatttcagctccctcgacgcc
ggcgaggagcagcgcggcggcggcggccgcgagaagcgagaccgcggcggggaccagcgg
gcgcacccgcagcgccggggacccgccgccccgcacggcaaggcgatgattgaacctcct
agtccctacaccagcttggaaactcaggatggctatttttcccaccgaccgaaagagaaa
atgcgaacagacagcaataatgaaaattcagtccccaaggactttgaaaatattgataac
agtaactttgctcccaggactcagaggcaaaaacaccagtctgagctggtgaaaaaaccc
cttagcaagcaaaaggagcacttgagaaagaaactggaagaggagaagatgaaggagaac
ttgctgctggggaagaactccaatgaggtggtgcaattcagtgatcaccccagaaaaaac
agcagcagcatcagcaacaacaatttcaaggagattcatatgtctcccagacagcatcat
ttaaaaaaaaatggaaacagctcccctgaactgagatacgatcagccaccaaagtgtgag
gtaacaggcaaagaggcaatctcagccatgtcccgggctaaatctaagcagtgtcggcag
gagatcgcagacgtgtattgtcagcacaagcatggaaagctgatgccggagaaggtgacg
cgtttctgtacgctggagggaaaagccaacaacaatgtacagtgggatgaggactccgta
gaatacatgccagccaacccagtcaggatcgcatttgtcttggttgttcatggcagagct
tctcggcagctccaacgcatgtttaaggctatttaccataaagaccatttttattacatt
catgttgacaagcgatccaattacttgcaccggcaagtgctccagtttgccaaccagtac
ccaaatgtgagagtcacttcttggagaatggcaactatctggggaggagcaagtcttctg
tccacctacctgcagaccatgaaggacttaatggagatgaatgactggccgtgggatttc
ttcattaacctcagtgctgctgactacccaatcaggacaaatgaccagctagtagcattc
ctgtccagatatcgtgatatgaacttcttgaaatcacatgggagggacaacgcaagattt
atcagaaaacaaggactggatcggcttttcctggaatgcgatacccacatgtggcgtctg
ggggaccggaggatcccagaaggaatcgcagttgacggagggtcagactggtttctcctg
aacaggaagtttgtggagtatgtcactttttctaatgatgatctggtaacaaagatgaag
agattttactcttacaccttgcttcctgctgagtccttctttcacactgttctggaaaat
agcccgtactgtgactccatggtggacaacaacttgcgcatcacgaactggaaccgtaaa
ctcggttgcaagtgtcagtacaagcacattgttgactggtgtggctgttcgcctaatgac
ttcaaaccagcagacttccacagattccagcagactgccaggccaactttctttgcccgc
aaatttgaagctgtagtgaatcaagagataattggccagttggactactacttgtatggc
aactacccctctggcactccgggcctccggtcctactgggagaatgtgtacgatgagcct
gacggcgtgcacaccctcagcgacgttgccctcaccatgtaccatgcgttctcccgcctg
ggcctgcggagagccgagacttcattccatgctgccggagataacagctgccgatactac
cccatgggccatccagtttccgtccacctttacttccttgctgaccgtttccaaggcttc
ctaatcagacaccacgcaaccaatctggctgtcagtaaactggaaactttggaaacctgg
gtgatgccaaagaaagtctttaagatcgcaagtccaccaagcgattttggaaggctgcag
ttctcagagattggcaccgaatgggacgccaaggaaaggattttccggaattttggagga
ctccttgggccgacagatgagccggttggcatgcagaaatggggaaaaggccccaatgtc
accgttactgtcatttgggtggatcctgttaatgtaattgcagcaacatacgatatcctt
attgaatccagtgccgaatttactcactacaaaccacctttgaatttgcccctgcgaccc
ggtgtctggacaataaaaattctgcaccactgggtacaggtagctgaaaccaaattcctt
gttactcctctcaccttctctaattggcagcctatcaaacaagaggaagccatgaagcat
cacagcgggcctccgaaaaacgcgtacatggagcagagcttccagggcttgaaccctgtc
ctgaatatccccatcagtgctgcccgcgtggagcaggccaagaggaacgcggggctcgtg
ggtgcccagctggaagcctgggtggactctctggtcggcagcgtctggtcagctgtggac
atctgcagtgccggccccaccgcctgcccagtcatgcagggctgtgctcagacagcctgg
agctccctcagcccggaccccaaatccgagctgggccccgtcaaacccgacggtcgcttg
aggtag
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