Rissa tridactyla (black-legged kittiwake): 128913488
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Entry
128913488 CDS
T09443
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128913488 (TNRC6A)
03036 Chromosome and associated proteins [BR:
rtd03036
]
128913488 (TNRC6A)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128913488 (TNRC6A)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Gene silencing
piRNA pathway
128913488 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
128913488
NCBI-ProteinID:
XP_054067114
LinkDB
All DBs
Position
8:8012104..8065780
Genome browser
AA seq
1929 aa
AA seq
DB search
MELSVYLNPAPVLFFALCCITVDMETNTTFCSRELEAKATKEVERKLSRAFLPHLCGTER
RDLVQEEEEQLMEERKKRKEDKKKKEAAQKKAIEQKIKVPEQTKTSVSQPQPVTSNGTST
VTSTNNNAKRATANSQQQQTLPRYPPREVPPRFRHQEQKQLLKRGQQLPVIAANLGSTPK
VLNGQSGGSTVTNKQPVTNGEVPNSSKKQPGMPPIRDLVSHSPNQSDLNHSGLGSHYENS
HWGPVSSNSDSSTNWDKVIVDGSDKEAWPSITGSDPELTSECMDTDSASSSGSERNLVIM
ASGSTGGENDGIRNGIGHGSQNKFVVGSNSNNVGNGSINGPWGLSHGTIISTCQVSVDAP
DSKSESSNNRMNAWGTINSSSNGGLNPSTLNSNGNHGAWPVLENNGHALKGSVGSGNPGT
NIQCSTIGQISNSQSINSKVGGSAHGSWGSLQENCDSEVNGTRKVSFSGQPQNLNTEMNG
PNNTTNFMTSSLPNSAGSVQINELPNNTGHGAWRVSTMNHSQIQASPVTNGTSISHLSNG
EAKNGGSYGTSWGAYGSNYSGDKCSGPNSQANGDTVNATLMQPGINGPGSTNFQINGNKG
GGVWEAGTVNSQNMPWGNGNGASAGGSRRGWGNPAQNTGTNISNGEWSKLPSNQHSNESV
NGNSRKFTNGWKSTEEDDLNSQSSAASQITEQNSAWAKTGTGDSEGSSESTGCHEDRVTT
EGQNRERRKVDQHALLQSIVNRTDLDPRVLSNSGWGQTPIKQNTAWDTETSPRGERKTDN
GTEAWGGSVTQTSSSGGCVDRPSPNNNDTSSVSGWGDPKSATRWGDSKGSNSQGGWEDDS
AATVMVKSNQSWGSGKEEKSSWNDAQKIKQGWVDGQKASQGWAVSASDSWGENSRSNHWG
EAKKSSSGGSDSDRSVSGWNEPGKSNSVTWGGNNTNPNNSSGWDEPAKSNQNQGWGDPPK
SNQPQGWGDSSKPVNSPEWNKQDVGSWGAPSATSKPPGSGWLGGPMPAPAKEEEPTGWEE
PSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKNVPNSSSSSDQQAQVHQQLLSSSAM
SSKESSSGSGWGEPSTPATTVDNGTSAWGKPMDTGTSWGEPISDAAGTSGWGNASLGQQA
SNKPGPKSMQDSWCGDDMPLTGSRQTSWEEEEDVEIGMWNSSSSQEANPSLNWPPYMKKM
PTKGIMKGGNKQDEAWINPFIKQFTNLSFSRESPEETIQSNKMDMSGGLLQDKRMEMDKH
GLNVGDYNRVVGKGPGSRPQISKESSMDRGPYFDKNGNPSMFGVGNIAAQPRSMQQPPAQ
TLNSSQPNPRAQVPPPLLSPQVPVSLLKYAPNNGGLSPLFGPQQVAMLNQLSQLNQLSQI
SQLQRLLAQQQKAQNQRSMPSGGRQQQEQQGRSLSMQQQMMQQSRQLDPNLLMKQQTPPS
QQQSLHQPTMKSFLENVIPHATPELQKGPSPINAFSSFPIGMNSNLNVNMDMSSIKEPQS
RLRKWTTVDSISVNTSLDQNSSKHGAISSGFRLEDSPFVPYDFMNSSNSPASPPGSIGDG
WPRAKSPNGSSSVNWPPEFRPGEPWKGYPNIDPETDPYVTPGSVINNLSINTVREVDHLR
DRNSGSSSSLNTTLPSTSAWSSIRASNYNVSLSSTAQSTSVARNSDSKSTWSPGSVTNTS
LAHELWKVPLPPKSITAPSRPPPGLTGQKPPLSTWDNSLRLGGGWGNSDARYTPGSSWGE
SSSGRITNWLVLKNLTPQIDGSTLRTLCMQHGPLITFHLNLPHGNALVRYSSKEEVVKAQ
KSLHMCVLGNTTILAEFASEEEISRFFAQGQSLTPSPGWQSLGSSQNRLGSIDGSHSFSN
RNDLNHWNGAGLSGTSSGDLHGTSLWGSPNYSTSLWGTPSSNDTRGISSPSPINAFLSVD
HLGGGGESM
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
atggagctcagtgtgtatcttaaccccgctccagttttattttttgctttgtgctgcatt
actgttgacatggaaaccaacaccactttctgttccagagaattggaagctaaagctacc
aaagaagtcgaaagaaaactaagcagggctttcctgcctcatttatgtggaactgagaga
agggatttagtgcaagaagaggaagaacagttgatggaagaaaggaaaaagagaaaagaa
gacaagaagaagaaggaagctgctcaaaaaaaggccattgaacaaaaaatcaaagtgcca
gaacaaacaaagacaagtgtaagccagcctcagcctgtcacctctaacggcacttccaca
gtaaccagcactaataataatgccaagcgggccacagccaacagtcagcagcagcagacc
ttgcctcgataccctcctcgtgaagtaccaccgcgatttcgacaccaggaacagaaacag
cttctgaaacgaggtcagcagttaccagttatagctgcaaacctgggatctactcctaaa
gtattaaacggccagtcaggaggcagcactgtcacaaataaacagccagtgaccaacgga
gaagtgccgaacagcagcaaaaaacagccaggcatgcctcccattcgggacttggtgagc
cactcccctaaccagtcagatctgaaccacagtggtctaggatcccattatgaaaattct
cactggggaccagtctcttcaaacagtgactccagcacaaactgggataaagttattgta
gacggctctgacaaagaagcatggccatcgatcactggcagtgacccagagttgacatca
gaatgtatggacactgactctgcctctagctctgggtcagagagaaacctcgttataatg
gcttcagggagcacaggtggtgaaaatgatggcattcgaaatggcattggacatggttct
caaaataagtttgtggttggtagcaacagcaataatgtgggcaatggaagtattaatggg
ccgtggggtttatcccatggaaccataataagcacatgtcaagtttctgtggatgctcct
gacagcaaatctgaaagtagcaacaatagaatgaatgcttggggcaccataaactcttca
tcaaatggagggttaaatccaagcactttgaattcaaatggcaaccatggtgcctggcct
gtattggagaacaatggacatgccctgaaagggtctgtagggagtggtaatcctggcaca
aatattcagtgcagtaccataggtcagatatctaatagtcagagtattaactctaaagtg
ggtggttcagcccatggttcctggggaagccttcaggaaaattgtgattctgaagtaaat
ggtacaaggaaggtttcattcagtgggcaacctcaaaaccttaacactgaaatgaatgga
ccaaataacactactaactttatgacctctagtttaccaaactctgctggttcagtgcag
attaacgaactgcctaataatacagggcatggggcctggcgtgtgagcacaatgaatcat
tctcagattcaggcctctccagttacaaatggcacttccatttctcatcttagcaatggt
gaggcgaaaaatggtggatcttatggtacttcatggggtgcctatggttctaattactct
ggagacaaatgttcaggcccaaacagccaagctaatggtgacactgtgaatgcaactcta
atgcagccaggcattaacgggcctggcagcactaactttcaaatcaacgggaataaagga
ggaggggtgtgggaggcagggacagtcaactcccagaacatgccatggggaaatggaaat
ggtgcaagtgctggcgggagtagaagaggatggggcaaccctgcacaaaacactggcact
aacatttcaaatggagaatggagtaaactgcctagtaatcagcattccaatgaaagcgtg
aatggaaacagcaggaagtttacaaatggatggaaatctactgaggaggatgaccttaac
agccagagttccgctgcttctcagataaccgagcagaacagcgcatgggccaaaacaggt
acgggggacagcgaaggtagttcggagagcactggatgccatgaagacagagtaactaca
gaaggacagaatcgagagcgaaggaaagttgaccagcacgcattactccaaagtatagtg
aacagaactgacttagatccacgtgtcctttccaactctggttggggacagactccaatc
aaacagaacactgcctgggatactgaaacatcaccgaggggtgaaagaaaaactgacaat
gggacagaggcctggggaggctctgtgacacagacttccagctcaggggggtgtgtggat
agacctagccctaataataatgatacctcatctgtatcagggtggggagatccaaagtct
gctacaaggtggggagactccaaagggtcaaacagccaaggggggtgggaagacgattct
gctgctacagtaatggtcaagagcaatcaatcatggggaagtggcaaagaggaaaagtca
tcttggaatgacgcacagaagatcaaacagggatgggtagatggacaaaaggccagccag
ggttgggcagtttctgccagtgatagctggggcgaaaattccagaagtaaccattggggt
gaggctaagaaatccagttcgggaggtagcgacagtgacagatcagtatctggttggaat
gagccaggtaaatcaaattctgttacttggggaggtaataatacaaacccaaataattct
tcgggatgggatgagcctgcaaagtctaatcagaaccagggctggggagaccctcctaaa
tccaatcagcctcaaggttggggggattcgtcaaagccagtcaactctccagaatggaac
aaacaagacgttggctcttggggagcaccatctgccacaagcaaacccccagggtcgggc
tggctgggtggaccaatgccggcaccagcaaaggaggaagaacccactggctgggaggag
ccatcccctgaatcaatacgccgtaaaatggaaattgatgatggaacttctgcttggggt
gatccaagcaaatacaactacaaaaatgtgaatatgtggaataaaaatgtcccaaacagt
agcagcagttcagaccagcaagcacaggtacatcagcagctactgtcttcaagtgccatg
tctagcaaggagagcagttcgggttctggttggggagagccttctactccagccactact
gtagataatggaacttcagcgtggggtaaacccatggataccggtactagctggggagaa
cccatcagcgatgcagcaggcacctctggctggggaaacgcttctcttggtcaacaggct
tcaaataaacctgggcctaaatctatgcaagatagttggtgcggagatgatatgccattg
acgggcagtcgtcagaccagctgggaggaagaggaggatgtagagattggaatgtggaac
agcagttcttcacaagaagctaacccatctttaaattggccaccatatatgaaaaaaatg
cccacaaagggaataatgaaaggtggaaataagcaagatgaagcatggatcaatccattc
attaagcaattcacaaatctcagtttttcaagagaatcaccagaagaaaccatacagagc
aataagatggacatgtctggagggttattgcaagataagcggatggagatggataagcat
ggcctcaatgttggagattacaatcgtgtggttggaaaaggccctggttctcgtcctcag
atttccaaagagtcttccatggatcgcggtccttactttgataagaatggcaatcccagt
atgtttggtgttggtaatatagcagcacagcccaggagcatgcagcagcctccagcacaa
actcttaattcatctcagcctaatccacgtgctcaagtgcctcctccattactatcccct
caggttccagtatcattactgaagtatgcaccaaacaacggtggcctgagcccactcttt
ggcccacaacaggtagccatgttgaatcaactgtcccagttaaaccagctttctcagatc
tcccagttacagcggttgttggctcagcagcaaaaagcgcagaatcaaagaagcatgcct
tctggtggtcgtcaacagcaggagcagcagggtcgatctcttagtatgcagcaacagatg
atgcaacagtcccgtcagcttgatccaaacctgttaatgaagcagcaaactccgccctct
caacagcagtcactccatcaacccaccatgaaatctttcctcgagaatgtcataccccat
gctactcctgagctacaaaaagggccatcaccaataaatgcattcagcagcttccctata
ggaatgaactcaaacttgaatgtaaacatggatatgagcagtattaaagagccacaatct
cgattgaggaaatggactacagtagacagcatttctgtgaacacatcgttagatcaaaac
tccagcaaacatggtgctatttcaagtggttttaggctggaagattctccatttgttcca
tatgactttatgaacagcagtaattcaccagccagtcctcctggatctattggggatggc
tggccccgtgccaaatcgcctaatggctctagcagtgttaactggccaccagagtttcgt
cctggtgagccatggaaaggttatccaaacatcgaccctgaaactgacccttacgtcact
cctggcagtgtcataaacaatctttcaattaatactgtgcgggaagttgaccacctcagg
gacaggaacagtgggtcatcctcatctttgaacaccacgctgccttcaactagtgcctgg
tcatccattcgtgcctccaactacaatgtttccctcagcagtacagcacaaagcacttca
gtagccagaaacagtgattccaaatcaacgtggtctcctggatcagtcactaacacctct
ctggctcatgagctgtggaaggtccctttgccacctaaaagcatcactgctccgtcccgc
ccacctccagggctaacaggccagaaaccaccgttgtccacttgggataattcccttcgt
ttgggtggaggatggggaaattctgatgccagatatacccctggttcaagctggggtgag
agcagctcagggagaataacaaattggcttgttctaaaaaaccttacacctcagattgat
ggctcaaccctgcgtactctgtgcatgcagcacggtccactaataacattccaccttaac
ctcccacatggtaatgctttggtccgttacagttcaaaagaagaggtagtgaaggcacaa
aaatctctgcacatgtgtgtattagggaacactactattcttgctgagtttgccagtgaa
gaggagattagtcgcttctttgcacaaggccagtctctgactccgtctcctggctggcaa
tctctgggatccagccagaaccgactcggatccattgacggttcccattcgttctcaaac
cgtaatgatctaaatcactggaatggtgctgggctgtcgggaactagcagtggagacctt
catggcacttcactttgggggagccccaactattccacgagcctgtggggcaccccgagc
agcaatgacaccaggggaattagcagcccgtcccccatcaacgctttcctttctgttgac
cacctaggtggaggtggagagtccatgtaa
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