Rissa tridactyla (black-legged kittiwake): 128913633
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Entry
128913633 CDS
T09443
Symbol
PATJ
Name
(RefSeq) inaD-like protein isoform X1
KO
K06092
InaD-like protein
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128913633 (PATJ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
MPDZ_u10
DUF6604
Motif
Other DBs
NCBI-GeneID:
128913633
NCBI-ProteinID:
XP_054067560
LinkDB
All DBs
Position
8:52361274..52517991
Genome browser
AA seq
1892 aa
AA seq
DB search
MPENPAADKQQVLQILDRLQAKLREKRDSQHNENLTVLRNTLRSPLFNQILTLQQSIKQL
KEQLNYMPPDRSVDFDFTKRGLLVFADKSVAAGSVSVPCSSPELKASTFTPNLGVNEFNA
IIQQMAKGRQVESIKIEKPSVGGLGFSVVALKNHSLGEVGIFVKEVQPGSIADRDQRLKE
NDHILAINCTPLDQNISHQHAIALLQQSTGSLHLVVAREPVQGNSRTSAVFLSDINPPET
IHWGHIEDVELINDGSGLGFGIVGGKSSGVVVRTIVPGGLADRDGRLRTGDHILQIGGTN
VQGMTSEQVAQVLRNCGNSVRMIVARDPKFDIMETPPAPVSWPVSTLPSFQNGNDDTNLF
ETYDVELIKKNGQSLGITIIGYAGTCDVEPSGIFVKNIIPGSAADHNGQIHVHDKIVAVD
GVNIQDYTNQEVVEALRNTGQTVCLTLLRRKPSSTVSPERTSDALQPTIPTFVSPGAVRT
ETGVGTKNGENQEQKDNLRNEKKQNLHKTGKLPLPPAHELKSKWENLLGPEYEVMVVNVD
MPFTDDSELQKYSKLLPIHTLRLGVELDTFDGHHYISSIASDGPAATLGLLQLEDELLEV
NGVQLYGKSRREAVTFLKEVPPPFTLVCCRRLFDDGSESLLDEPTVGASPPEQKVKPEED
INPEEEEGELALWSPDVKVIELKKDKNGLGFSILDYQDPLDPTRTAIVISSLVAGGVAER
GGELLPGDRLVFVNEKSLDSATLAEAVEVLKSVPPGTVSLGICKPLVAESKEEETVQSVD
SSNIKTSPGSPEPVDNINFSIILEAPQGFRDETPFKEELVDEPSLDLGRSFQLSQNDSKY
EESWEMHEFLKPRTEEMDEEREMLVDDEYEEDSDFLKYNASTGEKTSSERNLNTERWAKQ
LETTETPDLRSGVNLSPKQSLEYRFTKDQMCEENAGINSLFSGTTAHNGYPKDIFDTETT
QSGAKNKTDLGTKLQLDSKGPGLDVDLEAIEKEELKGEDYVYSKDLESGRVTTLSQPRTT
LCSELPEREEGEGEETPNFSHWGPPRTVEIFRDPHVSLGISIVGGQTVIKRLKNGEELKG
IFIKQVLEDSPAGRTRALKTGDKILEVSGVDLQNATHEEAVEAIKNAGNPVVFVVQALSN
VPKGVSAIQPKGIKVSKDQGADKENKSEKRKYGAPPPMKLPPPYRALERLHAEEANVDEE
EDEDACTEKKIRQRYADLPGELHIIELEKDKNGLGLSLAGNKDRSRMSIFVVGINPDGPA
GRDGRMHIGDELLEINNQILYGRSHQNASAIIKTAPSKVKLVFIRSEDAVNQMAVTPFPL
PSGSHSSIEDHGGTEPASGEEDPSLEVLMKSLTDEESNKADVKSKADKAVAADPQEVEEQ
LPENVLNHIKQSKSSTKVPANLQEIPLVPAPTYLSPEAEVTSRSVLPTPLPVDPATCPIV
PGQEMTIEISKGRSGLGLSIVGGKDTPLDAIVIHEVYEEGAAARDGRLWAGDQILEVNGI
DLRNASHEEAITALRQTPQKVQLVVYRDEAHYKDEENLEIFYVDIQKKTGRGLGLSIAGK
RNGSGVFISDIVKGGAADLDGRLIQGDQILSVNGEDMRNASQETVATILKCAQGLVHLEL
GRLRAGSWLSSRKTSQNSQVSQQSVHSHFHPALAPVLSTLQNFVSTKRSSADASQRNSVG
ADMGPRTVEITRGPNDALGISIAGGKGSPLGDIPIFIAMIQASGVAARTQRLRVGDRIVS
INGQPLDGLSHADAVNLLKNAYGSIILQVVADTNISAIATQLESMSAGCNLNSSSEHPSE
DPEAPQPKIITLEKGSDGLGFSIVGGYGSPHGDLPIYVKTIFAKGAAADDGRLKRGDQIV
AVNGEALEGVTHEQAVAILKRQKGTVTLTVLS
NT seq
5679 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaatcctgctgcagataagcagcaggtgctgcagatccttgatcgactgcaa
gcaaaactgcgtgagaaaagagattcccaacataatgaaaacctgactgttttgcgtaac
acactcaggagccctttgtttaaccagatactgaccctccagcaatccatcaagcaactg
aaggaacaactcaattatatgcctcctgaccggtcagtagattttgattttactaagaga
gggctgctagtgtttgctgacaagtcagttgctgctgggagcgtgtctgtaccttgcagt
tcacctgaactcaaagcatccaccttcactccaaacctgggagttaatgaatttaatgca
atcatccaacagatggcaaaggggagacaagtagaatcaataaagattgaaaagccttct
gttggaggtcttggatttagtgtggttgcccttaaaaatcacagcttgggagaagttggt
atctttgtcaaagaagtccagccaggaagcatagctgacagggatcaaagactaaaggaa
aatgaccacatactggccattaattgcaccccattggatcagaacatttcccatcagcac
gctattgccctcctccagcaatccacaggatccctacatctggttgttgctagggagcca
gttcaaggaaacagcagaacttcggctgtcttcttaagtgatataaatccacctgagacc
attcactggggccacattgaagacgttgagctgattaacgatggttcaggattaggcttt
ggaattgtaggaggaaagtcgagtggagtagttgtaagaacaattgttcctgggggatta
gcagatcgggatgggaggctccggacaggagatcacatcttacagattggagggaccaat
gtgcaaggaatgaccagtgaacaagtcgcacaagtgctgagaaactgtggaaattccgtt
aggatgatcgttgcaagagacccgaagtttgacattatggagactccaccagctcctgtg
agctggccagtcagtacattaccttcctttcaaaatggaaatgatgataccaaccttttt
gagacctatgatgttgagcttataaaaaagaatggacagagcctggggataacaattatt
ggatatgctggcacatgtgatgtagaaccttcagggattttcgtgaaaaatataatacct
ggtagtgctgctgaccacaatggccaaattcacgttcatgacaaaattgttgctgttgat
ggagttaatatacaggattatacaaaccaagaagtggtagaggcgttgcgtaacacagga
cagactgtatgccttaccttacttagaaggaaaccttcttctactgtttctccagaaaga
acttcagatgcattgcagccaactattccaacctttgtgtcccctggagcagtaaggact
gaaactggtgtgggcactaagaatggggaaaaccaagagcagaaagataatcttcgaaat
gaaaagaagcagaatctacataagacaggaaaactcccactccctccagcacatgagttg
aaatccaagtgggaaaacctgctgggacctgaatacgaagttatggttgtgaatgtggat
atgccctttacggatgattcggagctccagaagtactccaagctattacccatccacact
ttgagattaggagttgagcttgacacgtttgatggacatcattatatatcatcaattgct
tcagatggcccagctgcaacacttggtcttctgcaactggaggatgaacttctggaggta
aatggagttcagctatatggaaaatcacgccgcgaggcagtcacttttctaaaagaagtg
ccacccccgtttacactggtttgctgtcggcgcctttttgatgatggcagtgagtctctt
ctggatgaacccactgtgggagcttcccctccagaacaaaaggtgaaacctgaggaagac
ataaatcctgaggaggaagaaggggaattagcgttatggtctcctgatgtgaaggttatt
gaactgaagaaagacaaaaatgggttaggattcagcattttagactaccaggatcccttg
gatccaacaagaacagccattgtgatcagctctctggtggcaggcggagtggccgaacgt
gggggcgagcttttacctggtgaccgcttggtgtttgtaaatgagaaatctttggacagt
gccactttagcagaggcagtggaagtgttgaaatctgtgcccccaggtaccgtttctctt
ggaatctgcaagcctttggtggcagaaagcaaagaggaggagaccgtgcagagtgtggat
tccagcaacattaaaaccagccctggatctccagaaccagtagataatattaatttctca
ataatacttgaagcaccacagggtttcagagatgaaacaccttttaaagaagaacttgtt
gatgaaccaagtttggacttgggaaggtcgtttcagctttctcaaaatgacagtaagtat
gaggagtcatgggagatgcatgaatttctgaaacccaggacagaagaaatggatgaagaa
cgggaaatgttggtggatgatgagtatgaagaagattcagacttcctgaaatataatgca
tccactggagagaagacatcttcagagaggaacctcaatacagagcgatgggcaaagcaa
ctcgagactactgaaacaccagacttgagatccggtgttaacctaagtccaaaacagtcc
ctggaatatcggttcactaaagatcaaatgtgtgaagaaaatgctggtataaattcacta
ttttctggaaccacagcacacaatggctacccaaaagacatatttgatactgaaactacc
cagtcaggagcaaaaaacaagacggatttaggtacaaagcttcagcttgactctaaagga
cctgggcttgatgttgatctggaagctattgaaaaggaagaactaaaaggggaggattat
gtttattccaaggacctggagtctgggagagtaaccaccttatctcagcctagaacaacg
ttgtgcagtgaattacctgagagagaagaaggagaaggagaagaaactccaaacttcagc
cactggggaccaccacggactgttgagatctttagagaccctcatgtgtctcttggaatc
agtattgttggtggacaaactgtcataaagcgcctgaagaatggagaagaacttaaaggg
atctttatcaaacaagttttggaagacagcccagcaggaagaacaagggctttaaaaact
ggagataaaatacttgaggtttctggggtagacctacaaaacgccacacacgaggaagca
gtagaagctatcaagaatgcaggaaatcctgtcgtgttcgtggttcaggctttgtctaac
gtaccaaaaggagtttctgccatacagccgaagggaatcaaagtcagcaaagatcaaggt
gcagacaaagaaaataagagtgaaaagagaaaatatggggctccacctccaatgaaattg
ccacctccttatagagcacttgaaagactgcatgcagaggaagccaacgtggatgaagag
gaggacgaggatgcttgtacagagaaaaaaatcaggcaaagatatgcagatctgccggga
gagttgcacattattgagcttgagaaggacaaaaatgggctcggactgagtcttgctggc
aacaaggaccgctctcggatgagcatctttgtagttggtatcaatccagatggacctgca
ggacgagatggaaggatgcatattggcgatgaacttctagagataaacaatcagatattg
tatggaagaagtcatcagaatgcttctgcaatcattaagactgccccatcaaaggtcaag
ctagttttcatacgaagtgaagatgccgtcaatcagatggctgttactcctttcccgtta
ccttccggctctcactcttctattgaggatcacggtggcactgaacctgcaagcggtgaa
gaagacccgagtttggaagttctcatgaaaagcttgactgatgaggaatccaacaaagct
gatgtgaaatctaaagctgacaaagcagtggcagcagatccgcaagaagtggaggagcag
ctcccagaaaatgtcctcaaccacatcaaacaatccaaatcttcaacaaaagtaccagcc
aatttacaggagatacccctggtgccagcacctacttatctttctccagaggcagaagtc
accagccgtagtgtcttaccaactccactgcctgtggatccagcaacgtgtcctatagtt
ccggggcaggagatgactatagagatatctaagggtcggtcaggcctaggactcagcatc
gtcggggggaaagacactccactggacgccatagtgatccatgaagtttatgaagaaggg
gcagcagcccgggatggcaggctttgggccggcgatcagatcctggaggtgaacgggatc
gatctgcggaatgccagccacgaagaagctatcactgcgctgagacagacgccccagaag
gtgcagctggttgtttatagagatgaagcacattacaaagatgaagaaaacttggagatt
ttctatgtagatatacaaaagaaaacaggccgaggactagggctcagcatagctggaaaa
cgaaatggaagtggagtgtttatctctgacattgttaaaggaggagctgcagacctagat
ggaagattaattcaaggagatcagattttgtctgtaaatggagaggatatgagaaatgcc
tcacaagagactgttgccactatacttaagtgcgcccaaggcctagtgcatcttgagctt
gggaggttgcgagctggatcatggctatcgtcacggaaaacatcccaaaacagtcaggtg
agccaacagagtgtccatagccacttccaccctgcgcttgctcccgtcctctctacctta
cagaattttgtcagcacaaaaagatcttcagcagatgcgtctcagagaaactcagtagga
gcagatatgggcccaaggactgtggagataacaaggggaccaaatgatgcacttggtatc
agtatagcaggagggaagggaagtccgttgggagatatccccatcttcattgctatgatt
caagccagtggtgtggctgcacgtacccaaaggctccgagttggagatcggattgtcagt
attaatgggcaacctttggatgggctgtctcatgcagatgcggttaatctactaaagaat
gcttatgggagcattatcctgcaggttgtggctgataccaacatcagtgccattgctacc
cagctggagagcatgtctgcgggatgcaaccttaactcttcttctgagcatccttctgaa
gatcccgaagcacctcagcctaagattattactttggagaaaggctctgatggactggga
tttagtattgtaggggggtatggaagtccccatggagacctgcccatttatgtcaagact
atatttgccaagggagcagctgcggacgatggcagactgaagcgcggcgatcagattgta
gcagttaatggggaagctttggaaggtgtcactcatgagcaagctgtagctattctgaag
cgccagaaaggaactgtgacattaacggtgttatcatga
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