Rissa tridactyla (black-legged kittiwake): 128913672
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Entry
128913672 CDS
T09443
Symbol
NOTCH2
Name
(RefSeq) neurogenic locus notch homolog protein 2 isoform X1
KO
K20994
Notch 2
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128913672 (NOTCH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
NOD
Notch
NODP
Ank_5
Ank_3
Ank_4
EGF_3
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
128913672
NCBI-ProteinID:
XP_054067663
LinkDB
All DBs
Position
8:complement(24550529..24641518)
Genome browser
AA seq
2432 aa
AA seq
DB search
MARGAGPAFAALLGLVLAVLSRADPAAALQCMDDSKPCVNEGKCIPYQNGTGYCKCREGF
LGDYCQYRNPCESNTCKNGGTCETTSLIGKATCKCAPGFTGEECQYSESHLCYVSQPCLN
GGTCHPHSQETYECVCPPGYTGKDCQWIDACTSQPCANGSTCTVSGNKFSCICLSGYTGQ
KCEIDVNECATPGLCQHGGTCVNLPGSYRCQCKPGYTGHRCESVYVPCSPSPCMNGGTCH
QTSDFTFECNCLPGFEGSVCGHNVDDCPNHNCQNGGICVDGVNTYNCRCPPQWTGQFCTE
DVDECQLQPNACQNGGTCTNHNGGYACVCVNGWSGDDCSKNIDDCFTASCANGSTCIDRV
ASFSCICPEGKAGLLCHLDDACVSNPCQKGALCDTNPVNGHYICTCPQGHKGADCTEDVD
ECAMANSNPCEHAGKCVNTEGSFHCECLKGYTGPRCEMDINECHSNPCQNDATCLDKIGG
FTCLCMPGFKGVHCEEDIDECLSNPCVNNGECLDKVNRFLCVCPPGFSGAVCQIDIDDCS
STPCLNGAKCIDHPNGYECQCATGFTGLLCEENINNCDPDPCHHGECQDGIDSYTCICNP
GYMGAICSEQIDECHSNPCLHQGRCIDLVNGYQCNCLLGTSGVNCENNFDDCASNPCIHG
DCIDGINRYNCACKPGFTGPRCNVDIDECTSSPCHNGGTCINEVNGFRCVCPEGYHHPHC
QSQADGCLSNPCVHGNCTHITSGYKCVCDPGWIGDYCSTEGNECKSNPCQNGGTCEDLLN
GYRCTCRKGFKGVNCQIVVAPCSPDPCENSGICQESPDSEGYTCQCAPGWEGERCTVDID
ECLSKPCKNHALCHNIQGSYLCECRPGFTGGDCDSNIDDCLSNPCQNGASCVDGINSFSC
ICLPGFHGDKCQTDTNECLSEPCRNGGTCTHYVNSYTCKCQPGFEGTNCENNIDECTESS
CFNGGTCVDGINSFTCQCPVGFTGPFCLTEINECDSHPCLNKGSCVDSLGTYRCICPLGY
TGKNCQALMDLCSKSPCKNKGTCVQSGAQTRCVCPPGWTGAYCDVPNVSCQVAASQRGVT
VDQLCQHSGHCLNAGNSHRCQCQVGYTGSYCEMQLDECDSSPCQNGATCRDHLGGYQCEC
VPGYQGVNCEYEVDECQFQPCQNGGTCIDLVNHFKCSCPPGTRGRFCEENVDDCVLDSGG
PRCFNGGQCIDQIGGYSCICLPGFAGERCEGDINECLSNPCNPRGSLDCVQLINDYTCIC
RSAFTGRHCESVIDVCPRKPCQNGGTCAVASNMPDGFICQCPPGYSGAKCEFSSHSTCGQ
VKCKKGEQCIQTSSGPRCYCPKLSVGEECQTNTGCASAPCQNGGSCHPHSQPPYYYCQCP
VNTQGSQCEQPVTFSPEPRGCLDSQCAEKAKDGYCDEDCNTHACQWDGGDCSLTMEDPWA
NCSSSLRCWLLFNGQCDEFCNTPECLFDNFECQQNSKTCKYDKYCADHYADGRCDQGCNS
EECGWDGLDCAGDKAEKLAEGTLIIVVLMPPDELLGDVRSFLRTLGTLLHTNLRIKLDSQ
GNPMVFPYYGEKSAARSRRSLAVIRKHRELEQEVIGTRVFLEIDNRQCAEDSEQCFQNTE
AAAALLAAQAIKGMLPYPFVSVQSEPLLPPKTQLLYLLAVAALIILLILLLGVMMAKRKR
KHGSLWLPEGFILRRDPSNHKRREPVGEDAVGLKNLSVQIPEGNLADSGPTEHWAGDGGP
QPKRAKAEDQALLPEGDEQIDQRQWTQQHLEAADVCGSTSLALTPPQADQEVDVLDVNVR
GPDGCTPLMLASLRAGGSDISEDDEDAEDSSANIITDLIYQGANLQAQTDRTGEMALHLA
ARYSRADAAKRLLDAGADANARDNMGRTPLHAAVAADAQGVFQILIRNRVTDLDARMNDG
TTPLILAARLAVEGMVAELINCQADVNAVDDHGKSALHWAAAVNNVEATLVLLKNGANRD
MQDNKEETPLFLAAREGSFEAAKILLDHFANRDITDHMDRLPRDVAQDRMHHDIVQLLNE
YNVAHSPAGHPGAMLNSALSPVICGPNRSFLNLKHASLSKKSRKPNAKGIMPTNLTKDAK
RRRKKSLSESKGQFSESSVTLSPVDSLESPHAFASEPTSSPVMPSPGVLHSSPSSLLTAP
SVQAAHTMSFSNLHEMQPLGRGSSTVLPSVSQLLSQHRTTPPNSGLGRLRPANVSTEWMN
RMEVNESQYNEMFGMVPQVMHSHPSVSQQSGLVQADTKHLGVSRESLPPIMTFQLVPKGG
INQQALPQQAQSNCAQNMAGPLSSMYQIPDLAQLPSASFSMAAIPQQDGQVAQTVLPAYH
QFQSSMGKYPTPPSQHSCYSSATERTPSHNRHLQGEHPYLTPSPESPDQWSSSSPHSASD
WSDVATSPSNNQRGPAAAHMTEQQRNNMQVYA
NT seq
7299 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcggagcggggccagcgttcgctgccctcctcggcctggtgctggccgtgctc
agccgcgccgaccccgcggccgctttgcagtgtatggatgattccaagccgtgtgttaat
gagggaaagtgcattccgtatcaaaatggtacaggatattgcaagtgtcgagaaggcttt
cttggagactactgtcagtacagaaacccttgtgaaagcaatacctgtaagaacggggga
acttgtgaaactacgtctctgataggaaaggctacctgcaaatgtgctccagggttcacg
ggagaggaatgtcaatactccgaatcgcacctctgctacgtgtcccagccctgcctgaat
ggaggaacttgtcatccccacagccaggaaacctacgagtgtgtctgtcctccaggttac
acaggaaaggattgccagtggattgatgcctgtacatctcaaccttgtgccaatggaagt
acatgtactgtatctggaaataagttctcctgcatctgtctgtctggctacactggccag
aagtgtgagatagatgtgaatgaatgtgccacaccaggcctttgtcaacacggtgggact
tgtgtcaatttgcccggttcgtaccgatgtcagtgcaagccaggctatacagggcatcgc
tgcgagagcgtgtatgtgccgtgttcaccatcgccctgtatgaatggaggaacttgtcat
caaacaagtgactttaccttcgagtgcaactgcctgccaggtttcgagggaagcgtctgt
gggcacaatgttgacgactgcccgaatcacaactgccaaaatgggggtatctgtgtggac
ggtgtgaacacgtacaactgccgctgcccaccgcaatggacaggccagttttgcactgaa
gacgtcgatgaatgtcagctccagcccaacgcttgtcagaatggaggtacctgcaccaac
cacaacgggggctacgcctgcgtctgcgtcaacggttggagtggggatgactgcagtaag
aacattgatgattgcttcactgcctcctgtgccaatggatctacttgcatcgatcgagtg
gcttctttctcatgcatttgtccagaaggaaaagcaggtcttctctgccacttggatgat
gcgtgcgttagcaatccgtgccaaaagggtgctctgtgtgataccaatcccgtgaatgga
cactatatctgcacctgtcctcaaggccataagggagcagactgcactgaggatgtggac
gagtgtgcaatggcaaacagcaatccctgtgaacatgctgggaaatgcgtaaacacagaa
ggctctttccactgtgagtgtttgaagggctacacaggaccgcgctgcgaaatggacatc
aatgaatgccattcgaatccatgccaaaacgatgccacctgcctggataaaatcggagga
tttacatgtctctgtatgccaggttttaaaggcgttcactgtgaagaagatattgatgag
tgtctgagtaatccctgtgtgaacaacggagagtgtcttgataaagtcaaccgctttctt
tgtgtctgtcctcctggattcagtggggccgtgtgtcagattgatatagatgactgctcc
agcacaccatgtctcaatggagccaagtgtatcgaccatcccaatggctatgagtgccag
tgcgccacaggttttactggccttctgtgtgaggagaatatcaacaactgtgatcctgat
ccttgccaccatggggaatgtcaagatggaatcgattcgtacacgtgtatatgcaatcct
ggctacatgggtgccatctgcagcgagcagatagatgaatgccacagcaatccctgcctc
catcaagggcgctgcattgatttggtgaatggttaccaatgcaactgtttgcttggcact
tcaggagtgaactgtgaaaataactttgatgactgtgcaagtaacccatgcattcacggg
gactgtattgatggcattaatcgctacaattgtgcttgcaaacctggatttacaggccca
cgttgtaatgtggacattgatgaatgcacatccagcccctgtcataatggtgggacgtgt
ataaatgaagtcaatggctttcggtgtgtatgtcccgaaggttaccatcatcctcactgt
cagtcacaggcagatggttgtcttagtaatccctgcgtacatggcaactgcacacatatt
acaagcgggtacaagtgtgtctgcgatccaggctggataggagattactgttcaacagaa
gggaacgaatgtaaatcaaacccgtgccagaatggaggaacttgtgaggatttgttgaac
ggctacagatgtacctgtaggaaaggattcaaaggtgtgaactgccagatagtggttgct
ccttgttcccccgatccttgcgagaactcgggaatttgccaagaatctcctgactctgaa
ggctacacctgccagtgtgcccctggatgggaaggggagagatgtacagtggatattgat
gaatgcctctccaagccctgcaaaaatcatgccctgtgccataatattcaaggcagttac
ctgtgcgaatgccggccaggctttactggaggagactgtgacagtaacattgatgactgc
ctttcaaatccctgccaaaacggagcttcgtgtgtggatgggataaactctttctcatgc
atctgcctccctggatttcatggagataaatgtcaaacagataccaacgaatgcctgagt
gaaccctgcaggaatggaggcacctgcacccactacgtcaacagctacacgtgcaagtgt
cagcctgggtttgagggaaccaactgcgagaacaacatcgatgaatgcactgagagctcc
tgtttcaatggaggtacttgcgtggatgggatcaattcctttacttgccagtgtccagtg
ggatttacgggacccttctgcctcacagaaatcaatgagtgtgattcacatccttgcttg
aacaaaggctcttgcgtggacagcctgggcacataccgatgtatatgtcctttgggttat
actgggaagaactgtcaggcacttatggatctgtgcagcaagtctccctgtaagaataaa
gggacgtgtgtccagagcggagcccagactcgatgcgtctgtccacctggctggactggc
gcctactgcgatgtgcccaatgtctcctgtcaagtggcagcttcacaaaggggagtcacg
gtggaccagttgtgccagcactctggccattgtctcaatgctggaaactcacaccgctgt
cagtgccaggtgggttacactggcagctactgcgagatgcagctggatgagtgtgactcc
agcccctgccagaacggtgctacctgccgggatcacctgggcggataccagtgcgagtgt
gtgcctggataccagggtgtcaactgcgaatacgaagtggatgagtgccagtttcagccc
tgccagaacggaggaacgtgtatagacctcgtcaatcacttcaagtgctcctgtccacca
ggaactcggggccgtttctgcgaggagaacgtcgatgactgtgttttggactcaggagga
ccccgctgctttaacggagggcagtgcattgaccagatcgggggctacagctgtatttgt
ctcccaggctttgcaggcgagcgatgcgagggagatatcaacgaatgcctctctaatcct
tgtaaccctcgtggaagtctggactgtgttcagctgataaatgattatacatgcatctgt
cgtagtgcttttactggtcgtcactgtgagagcgtaatagatgtgtgtccccggaagcct
tgtcagaacggaggtacctgtgctgttgccagcaatatgccggatggcttcatctgccag
tgtcctccgggttattctggagcaaaatgtgaattcagcagccacagtacttgcggacaa
gtgaaatgcaagaagggggagcagtgcatccagacatcttctggtccacgctgctattgc
cccaagctgtctgtgggagaggaatgccagacaaacacgggttgtgccagtgccccctgc
cagaacggtggaagctgccaccctcattctcagcctccttactattactgtcagtgccct
gttaacacccaaggcagccagtgtgaacagcccgtaactttcagcccggagccccgagga
tgtttggattcccagtgtgcggaaaaagcaaaagacggctattgcgatgaagactgtaac
actcacgcctgccagtgggatggaggtgactgctccctgacaatggaagatccttgggcc
aactgctcctcttcattgcgctgctggttgcttttcaatggacagtgtgacgagttctgc
aacacacccgagtgcctgtttgacaacttcgaatgccagcaaaatagcaaaacatgcaag
tatgacaagtattgtgccgatcactacgcagatggccgctgtgaccagggctgtaacagt
gaggagtgtggctgggacggcctggactgtgctggtgacaaagctgagaagctggcggaa
gggaccctaatcattgtggtcttgatgcctcctgacgagctgctgggtgacgttcgcagc
ttcttgcgcactttggggactcttctgcacaccaatctgagaatcaagctggactcccag
ggaaaccccatggtattcccatactatggggagaaatcagcagcacgaagtcggcgatcg
cttgcggtcattcgcaagcacagagaactagagcaagaggtcattggcaccagggtgttc
ctggagattgacaaccgtcagtgtgcagaggattcggagcaatgctttcagaacacagaa
gctgctgcagctctcttagctgctcaggccatcaagggcatgttgccctatcctttcgtg
tctgtccaaagtgaacccttgttaccaccgaagacccagttgctttacctacttgctgtg
gcagctttgatcatcctcttaattcttctcttgggtgtgatgatggcaaagcgtaagcgc
aaacacggttcgctgtggctcccagagggctttattctgcgcagagatcctagtaatcat
aagcgcagagagccagtgggggaagatgctgttggactcaaaaatctctcagtccagata
ccggaggggaacctggcagattctggaccaactgaacactgggcgggtgatggtggacct
cagccaaagagagcaaaggctgaagatcaagccttgctcccggaaggggatgagcagata
gatcagcgccagtggacacagcagcacttggaggcagcagacgtctgtgggagcacgtca
ctagcccttacaccgcctcaagcagatcaagaggtggatgttctggatgtcaatgtcaga
gggccagacgggtgtactccgcttatgttggcatctctgcgggcgggcggctccgatatc
agcgaggatgatgaagatgcagaagattcctcagcaaatataataacggatttgatctat
caaggcgccaacctgcaggcccagacagaccgcaccggggagatggcactgcacttggca
gcccgttactcaagagcagatgctgcgaaacgtttgctggatgctggtgcggatgctaat
gcacgggacaacatgggacggactcccctgcatgcagctgtagctgctgatgcccagggt
gtcttccagatcttgatccgtaacagagtgacggacttggatgctcggatgaacgatgga
acgaccccgttaattctggctgcgcgtctggctgtggaaggaatggtggccgagctaatt
aattgccaggcagatgtgaatgccgtagatgaccacggtaaatctgctcttcactgggct
gctgctgtcaacaacgtggaagcaacactagtgctgctgaaaaatggagccaacagagac
atgcaggataacaaggaagagacgccgctcttccttgccgctcgggaaggcagtttcgaa
gcagcaaaaatcttgctggaccattttgccaatcgagacatcacagaccacatggaccgc
ctgccccgagatgtggcccaggaccggatgcaccacgacatagtccagcttctcaacgag
tacaatgtggcgcacagccccgctgggcaccccggcgccatgctgaactctgccctctcc
ccggttatctgtggcccgaataggtccttcctcaatctgaagcacgcttcgttaagcaag
aagtcacgaaaaccgaatgccaaaggcatcatgcccacaaacctcaccaaagatgcaaag
aggagaaggaagaagtccctcagtgagagcaaagggcagttttcggagagctcagtgacc
ctgtcaccagttgattccctagaatcgccccatgcttttgcatccgaaccgacatcgtct
cccgtgatgccgtcgccgggggtgttacactcatcgcccagctcgctgctgaccgctcca
tcggtgcaggctgcgcacacaatgtccttctccaacctccacgagatgcagcccttagga
cgtggatccagcacggtgctcccatccgtcagccagctcctttcacagcacagaaccacc
cctcccaacagtgggctgggcaggctccggccagccaacgtttccaccgagtggatgaac
cgtatggaggtgaacgagtcccagtacaacgagatgtttggcatggtgccgcaggtgatg
cattcgcaccccagtgtttctcagcagagcggtttggttcaagcggatacgaagcacctg
ggagtgtccagggagtctctgccccctatcatgactttccagctggttcccaagggtggc
ataaaccagcaagcactgccacagcaggcccagtcaaactgcgctcagaacatggctggg
cctcttagctccatgtaccagataccggatttagctcagctgcccagcgcctcgttctcc
atggctgccatccctcagcaggatgggcaagtggctcagacagtcctcccggcttaccac
cagttccagagctcgatggggaagtaccccacgcctccctcccagcacagctgctactcc
tcggccacagaacggactcctagccacaaccggcacttacaaggggagcacccatacctg
actccgtcgcccgaatctccagaccagtggtcaagctcctccccacactctgcctctgac
tggtctgatgtggcaaccagtcccagtaacaaccagcgcgggccggcagccgctcacatg
acggagcagcagcggaacaacatgcaggtgtatgcctga
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integrated database retrieval system
