Rissa tridactyla (black-legged kittiwake): 128913674
Help
Entry
128913674 CDS
T09443
Symbol
SMURF1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04120
Ubiquitin mediated proteolysis
rtd04137
Mitophagy - animal
rtd04144
Endocytosis
rtd04340
Hedgehog signaling pathway
rtd04350
TGF-beta signaling pathway
rtd04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128913674 (SMURF1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
128913674 (SMURF1)
04350 TGF-beta signaling pathway
128913674 (SMURF1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128913674 (SMURF1)
04137 Mitophagy - animal
128913674 (SMURF1)
09144 Cellular community - eukaryotes
04520 Adherens junction
128913674 (SMURF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128913674 (SMURF1)
04121 Ubiquitin system [BR:
rtd04121
]
128913674 (SMURF1)
03029 Mitochondrial biogenesis [BR:
rtd03029
]
128913674 (SMURF1)
Enzymes [BR:
rtd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
128913674 (SMURF1)
Membrane trafficking [BR:
rtd04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
128913674 (SMURF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
128913674 (SMURF1)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
HECT type E3
128913674 (SMURF1)
Mitochondrial biogenesis [BR:
rtd03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
128913674 (SMURF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
128913674
NCBI-ProteinID:
XP_054067672
LinkDB
All DBs
Position
8:complement(4625000..4672994)
Genome browser
AA seq
737 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDP
KWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPTDTDAVRGQIVVSLQTRDRIGTGGSVVDCRGLLENEGFPVFRTVYEDSGPGRPLSCF
MEEPAPYTDTTGAAGGGNCRFVESPSQDQRFQAQRLRTPEVRGHVQTPQNRPHGHQSPDL
PEGYEQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRI
YFVDHNNRTTQFTDPRLHHIMNHQCQLKEPSQQPLPAPNEGSLEDGEELPAQRYERDLVQ
KLKVLRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDY
GGVAREWLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAV
FHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHN
AFGRILQHELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLL
KPFDQKELELIIGGLDKIDLNDWKSNTRLKHCMADSNIVKWFWQAVETFDEERRARLLQF
VTGSTRVPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKL
YEKLLTAVEETCGFAVE
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcccggtacccgccggaacggctccagcatcaagatccgcctcacagtatta
tgtgccaagaatcttgcaaagaaagatttcttcagacttcctgacccatttgcaaaaata
gttgttgatggatcaggtcagtgccattcaactgacactgtgaagaacacattggacccc
aaatggaaccagcattacgatctatatgttgggaagacagattccataaccatcagtgta
tggaaccataaaaaaatccacaagaaacagggagctggcttcctggggtgcgtccgactc
ctctccaatgccatcagcaggctaaaagatactggataccagcgtttggatctatgcaaa
ctaaatcccacagataccgatgctgtacgaggccaaatagtggtcagtttacagacacgg
gacagaataggtacaggaggttctgtagtagactgtagagggcttttggagaatgaaggt
ttccccgttttcagaacggtttatgaagactccggaccgggaaggccgctgagctgtttt
atggaagaaccggcaccgtacacagacactacgggggctgctggcggaggcaactgtcgc
ttcgtagagtcccccagtcaggatcagaggtttcaggcacagcgacttcggactcctgaa
gtcagaggtcatgtacagacacctcagaacagaccgcacggtcaccagtcgcctgaccta
ccagaaggctacgaacaaagaacaacggtacagggacaggtttattttttgcacacacag
actggagttagcacatggcatgaccctaggataccaagagaccttaacagcgtgaattgt
gatgaactaggacctttgcctccaggttgggaagttagaagtacagtttcgggaagaata
tattttgtagatcataacaacagaaccacacaattcacagatccacgactacatcacatc
atgaaccatcaatgccagctaaaagagcccagccagcagcccctgccagctccaaatgag
gggtcactcgaagacggggaggagttgcctgcacaaagatatgaaagagacttggtacaa
aagttgaaagttcttagacatgagctctctcttcagcaaccccaggccggtcactgtcgc
attgaagtatccagagaggaaatatttgaggaatcctaccgtcagataatgaagatgagg
ccaaaggacttgaaaaagaggcttatggtgaaattccgaggagaggaaggcctggattat
ggaggagtagcaagagaatggttgtatttattgtgccatgaaatgttgaatccctattat
ggactcttccagtactccacagataatatttacatgctgcaaatcaatccagactcttct
atcaatcctgaccatttgtcttatttccattttgttggtcggataatgggtttggctgtg
ttccatggacactatatcaacgggggtttcacggttcccttttacaaacagcttctgggg
aagcccattcagctctccgatctggaatctgttgacccagaattacacaaaagtttagtc
tggatcttagagaacgatatcaccccagttctggaccatacattttgtgtggaacacaat
gcttttgggcggattttacagcacgaactcaaaccaaatggcaggaatattccagtgaca
gaagagaacaagaaagaatatgtcaggttgtatgtaaactggcggtttatgagaggaata
gaggcacagttcctggctctgcagaaaggttttaatgaacttattcctcagcatctcctt
aagccttttgaccagaaggaacttgagctaatcataggaggcctggataagatagacctg
aacgactggaagtcaaacacgcgtctaaagcactgcatggcagacagcaatattgtgaag
tggttctggcaagcggtggaaacatttgatgaagaaagaagggcaaggctgctgcagttc
gtgacgggttcgacgcgtgtcccgcttcaaggtttcaaggctttacaaggttctacaggc
gctgcaggacccagactgtttaccatccatttaatagatgcaaacacagacaaccttcca
aaagcccacacttgctttaaccggattgacattccgccttatgagtcatacgagaagctt
tatgagaagctgttgacagctgtggaagagacatgtgggtttgctgtggagtga
DBGET
integrated database retrieval system
