Rissa tridactyla (black-legged kittiwake): 128913678
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Entry
128913678 CDS
T09443
Symbol
MYSM1
Name
(RefSeq) deubiquitinase MYSM1 isoform X1
KO
K11865
histone H2A deubiquitinase [EC:3.4.19.-]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtd01002
]
128913678 (MYSM1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128913678 (MYSM1)
Peptidases and inhibitors [BR:
rtd01002
]
Metallo peptidases
Family M67
128913678 (MYSM1)
Ubiquitin system [BR:
rtd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
128913678 (MYSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
JAB
Prok-JAB
Myb_DNA-bind_6
UPF0172
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
128913678
NCBI-ProteinID:
XP_054067686
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All DBs
Position
8:complement(51278883..51295717)
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AA seq
863 aa
AA seq
DB search
MAAATEELEVDIEGDPAAAPGEVAAVGNHENTASNLLQDHYLDSSWRTDNSLPWTLDSSI
SEENRAVIEKMLLEEEYYLSNKSLSEKIWLNQKEAEKRSMKSPHKKTGKVMVRSPTKSAS
YSLKWTSEEKELFEQGLVKFGRRWTKIAKLIGSRTVLQVKSYARQYFKNKAKTDDSEKEE
RGQCGSSLPIEDGIRVEAWSSGNLRGRADPNLNAVKIEKLSDDEEVDITDDVDELLSPTF
QQETVKSELSVISKSPVEEMKGMERVLSSVGHASAISLPKEGPQHTKQDTVDALVFPGVA
ATCSQHLNGDKSVNLNYRQYNNFIEKAEQGRLVTSHGTGRVTDQELNEEQRDLADNGLLF
PSPCQVDGDHQEEAEELKPPDQEVEVDRSIILEEEKQAIPEFFEGRQAKTPERYLKIRNY
ILDQWERCKPKYLNKTSVRPGLKNCGDVNCIGRIHTYLELIGAINFGCEQAVYNRPQLAD
KTRSKEGKDTVEAYQLAQRLQSMRTRRRRVRDPWGNWCDAKDLEGQTFEHLSAEELARRR
EEEKLKPAKSSKGSRQIKSSFDPFQLIPCCLFTEEKQVCTYERIIKNTLLLVLLFLYSLL
CLSFQEPFQVKVSSEALLIMDLHSHVSMAEVIGLLGGRYSEADKIVEVCAAEPCNSLSTG
LQCEMDPVSQTQASETLAARGYSVIGWYHSHPAFDPNPSIRDIDTQAKYQSYFSRGGAMF
IGMIISPYNRNNPLPYSQITCLVISDEISSDGSYRLPYKFEVQQMMEEPQWELIFEKTRW
IIEKYRFCHSSVPMDKIFHRDSDLTCLQKLLECMRKTLGKVTNCFIAEEFLTQIENLFLS
TYKSEKKSNAEENENEQSNESPV
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgacggaggagctggaggtggacatcgaaggcgacccggcggcggcgccc
ggagaggtggcggcggtgggaaatcatgaaaacacagcttcaaacttgctgcaggatcac
tatcttgattcatcttggagaactgataatagtcttccatggacgttggacagcagcatt
agtgaagaaaacagggctgtcattgagaaaatgttgctggaagaagaatactatttatct
aataaatcactttctgaaaaaatatggctgaatcaaaaggaagcagagaaaagatctatg
aaaagcccacataagaaaactggaaaagtcatggtgcgatcacctacaaaatcagctagc
tactcattaaagtggacatcagaagaaaaggaactgtttgaacaggggctagtgaaattt
ggccgtcggtggacgaaaattgccaagttgattggaagtcgtactgttctacaagtaaag
agctatgctcggcagtattttaagaacaaggcaaaaactgatgactctgaaaaagaagag
cgaggtcagtgtggtagcagtcttcccattgaagatgggataagggtagaagcgtggtcg
tctggaaacttgagaggccgtgcggaccccaatctgaatgcagtgaaaattgaaaagctg
tctgatgatgaagaagtagacataactgatgatgtggatgaactactttctcctaccttc
cagcaagaaactgtaaaatctgaattatctgttatttcaaaaagtccagttgaagaaatg
aaaggaatggaacgtgttctttcatctgttgggcacgcttctgcaatttctttacctaaa
gaaggtcctcaacacaccaagcaagatacagtggatgcattagtatttccaggtgttgca
gcaacgtgttctcagcacctgaatggtgataaatcagtgaatttaaattaccggcaatac
aataattttattgagaaagctgaacaaggcagactagtaacatctcatggcactggacga
gtgactgatcaggagcttaatgaggaacagagagacctggctgataacggattgcttttt
ccctctccctgccaagtggatggagatcatcaggaagaagcggaggagcttaaacctcct
gatcaagaagtggaggttgacagaagcatcattctggaagaagaaaagcaagctattcct
gaattttttgaagggcgccaggccaaaacaccagagcgttatttgaaaattaggaattat
attttggatcaatgggagaggtgtaaacccaaatacctgaataagacttcagtacgtcca
ggccttaagaactgcggtgatgttaactgcattggacggatccacacatacttggaatta
ataggagcgattaactttggctgtgaacaggctgtctataaccgaccccaactagctgat
aaaacgcggtccaaagaggggaaagacacagtggaagcgtaccagctcgctcagcgcttg
cagtccatgcgcacaagacgacggcgagtgcgagacccttggggaaactggtgtgatgca
aaggatttggaaggacagacatttgagcatctgtctgctgaagaattagcaagaagaaga
gaggaagaaaaactgaaacctgcaaaatcttctaaaggttccagacaaataaaaagttcc
tttgatccctttcagctgataccgtgctgtttattcactgaagagaaacaggtatgtacc
tatgagagaataatcaagaatactttattacttgtgctacttttcttatactcattgttg
tgtttatcatttcaggaacctttccaggtgaaagtgtcttctgaagcacttctaataatg
gatttgcactctcacgtgtccatggcagaagtaattgggctgctaggtggaagatactct
gaagctgataaaattgtagaagtttgtgcagcagagccgtgcaatagcctcagtacaggg
ctgcagtgcgagatggatccagtatcacagacgcaggcctcggaaacgctggctgccaga
ggatacagtgttattgggtggtaccattcccacccggccttcgaccccaacccctcaata
cgggacattgacactcaggctaaataccagagttatttctcccggggtggtgccatgttc
attggaatgattataagtccttacaaccgcaataatcctcttccatattctcagattact
tgtctagtaatcagcgatgagatcagttctgatggttcctaccgcctgccctacaaattt
gaagtgcagcagatgatggaggaacctcagtgggaattaatatttgaaaaaacaaggtgg
ataattgaaaaataccgattctgccatagcagtgtccccatggataaaatttttcacaga
gattctgacctgacttgtttgcagaaacttttggagtgcatgaggaagactttgggcaag
gtaacaaactgcttcattgctgaagagttcttgactcagatcgaaaacttattcctctcc
acgtacaagagtgagaaaaagagtaatgccgaagaaaatgagaacgaacaatcaaatgaa
tcgccggtgtga
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