Rissa tridactyla (black-legged kittiwake): 128913784
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Entry
128913784 CDS
T09443
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04010
MAPK signaling pathway
rtd04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128913784 (CACNA1H)
04020 Calcium signaling pathway
128913784 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtd04040
]
128913784 (CACNA1H)
Ion channels [BR:
rtd04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128913784 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
128913784
NCBI-ProteinID:
XP_054067938
LinkDB
All DBs
Position
8:complement(5862676..6115575)
Genome browser
AA seq
2441 aa
AA seq
DB search
MTDGESREPLPRPAGGEVRVPIAAPPRRPAEQPPEDAGSGSGPGGSPGRDPPPDLASEEE
EQVPYPALAPTAFFCLKQTTRPRSWCLRLVCNPWFEHVSMLVILLNCVTLGMFQPCEDVE
CQSERCTILEAFDDFIFAFFAVEMVIKMVALGIFGQKCYLGDTWNRLDFFIVMAGMMEYS
LDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIV
GVQLWAGLLRNRCFLDKNFAMTYNLTFLHPYYRTDEAEENPFICSSHRENGMQKCSNIPN
RKEYKVECTLSMDSYTPSLYNPDFSSRNACINWNQYYNVCMAGDVNPHNGAINFDNIGYA
WIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQ
RENQLMQEQRARYLSNDSTIASFSEPGSCYEELLKYICHIFRKVKRRTIRLYNNWQSKRR
KKVNPNSTTNGQSHRGKKRITSIHHLIHHHHHHHHHHYHISNGSPRGPRSNPEICDLELK
VMKPGGQLMLPSPSPNLQSPAPPPDSESVHSIYHADCHVEGPQVNCKSSNAPASIKLTAG
LSNHGNMNYPTILPSPTSKASSIPVPKGKKNGNSPVAVANSPVNLGTDSYGKLQQLVGEH
GLRRTPSRLSGLSAACPLPSPPGGTLTCELQDCPFCASLLEDPEFAFSESDSCDSDSNGV
YEFTQDLQHGDHRDQLQQQRGRRRRKKKKPKERNKVTRLWKAFGSKLKRIVESKYFNRGI
MIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMFALEMLLKLLAFGLFGYIKNPYNI
FDGIIVVISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFC
MLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVV
LYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDTDEDKTSANFD
DDFEKLKDLRATEMKMYSLAVTPNGHLEGRGSMPPPIIMRTAATPMPTPKCSPHMDSVHT
FVDSRRGSNASLDPLSYDQKSLSSLRSSPCANWGTSSNWGSRRSSWNSLGRAPSLKKKNQ
SGERESLLSGEGKGSTDDDSDDAKSSTVSRPSLHRRAESLDCRSSLDLPELLQLPTMRHS
LSVSPMAVLPAEYQDCNGKMVHVPSEFFLRVDGHKEDAMDYEDDMEDSYCYRIRKVLEPY
KPQWCKSHEDWSLYLFSPQNRFRMMCQKVIAHKMFDHVVLVFIFLNCITIALERPDIDPH
STERIFLSVSNYIFTAIFVAEMMVKVVALGFFSGENTYLQSSWNVLDGVLVFVSIIDIIV
SMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFF
IIFGILGVQLFKGKFYYCDGPDVKNITTKTDCTNARYKWVRRKYNFDNLGQALMSLFVLS
SKDGWVNIMYDGLDAVGIDQQPIQNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKC
RQHQEAEEARRREEKRLRRLEKKRRSKEIYLSEAQRRPYYADYSPARKYIHTLCTSHYLD
LFITFIIGVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAVLKLVAFGFRRFFKDR
WNQLDLAIVLLSIVGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLD
TVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLDCSEENPCEGLSRHATFTNFGMAFLT
LFRVSTGDNWNGIMKDTLRECTREDKHCLSYLPVISPVYFVTFVLIAQFVLVNVVVAVLM
KHLEESNKEAKEDAEMDAEIELEMSRGATTSATSGSRGGAVAPESRAPYRSQETMKSESA
VQVKHQALGGTASLRPQDSQNLLTVRKISVSRMHSLPNDSYMFRPVMPAKAPFPLHEVEM
ETYPCKSQRGSITSIRSQPVGTCSSLRVPTESLQLAVRSPNHEGRHRWKILPPHVTPRSP
TLNKLLCRQEAIQTESVDGQTPDRKDSLQAEPGETLPSAKQPQSTFTPSPLHSTAASLPG
TPPRSPPSSPHRHPSTLTRKHTCGQHGVPSRPPSPGGSPPNPEGSLFESSDLADEEVRHI
NSSAKDWGGEHSDAGSRSTSPFISPAPSPVPLKNCSTTSLSRSSSKEKDLKKFYSIDTKG
FLNKPSWADDQRRHSIEICPSISDGDCSFEDPAEEKQRSPAHIQMESEYIHGARRKKKMS
PPCISIDPPMEDDGGAASRTKPSENSMLRRRTPSCEFPAYRESLELAENQPGEPASKAER
RGQPPCRGEHLTIPNFSFEQLDGSSLSSLSDLLDSGQSMPGSVDSRPDPAASELKKTDHL
KTQWSNAEKSKELLGIAKSPLQKQDLVPVTVATEEDIDDPV
NT seq
7326 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgagagccgagagccgctgccgcgcccggccggcggcgaggtgcgggtg
cccatcgccgcgccgccccgccgccccgccgagcagccgccggaggatgccggctccggc
tccggccccggcggctcccccggccgcgacccgccgcccgacttggcctccgaggaggag
gagcaggtgccttacccggcgctggcacccaccgccttcttctgcctcaagcaaaccacc
cgcccgcgcagctggtgcctcaggctggtctgtaacccctggttcgagcacgtcagcatg
ctggtcatcctcctgaactgcgtcaccctgggcatgttccagccctgtgaggacgtggaa
tgccagtcggagcggtgcaccatcctggaggcatttgacgacttcattttcgctttcttt
gcggtggagatggtcatcaagatggtggctctggggatctttgggcagaagtgttacctt
ggagatacgtggaatcgcctggacttcttcatcgtgatggcgggcatgatggagtattct
ctggacggacacaacgtgagcttgtctgcgatacgcaccgtccgggtacttcggccgcta
cgagccattaacagggtcccaagtatgcgaatactcgtcaccctgctgttagatactctg
cctatgttaggcaacgtcctcctcttgtgcttctttgtcttcttcatctttgggattgtc
ggtgtgcagctctgggcagggctgctgagaaacaggtgtttcctagacaagaattttgca
atgacatacaaccttactttcctgcatccgtactaccggacagacgaagcagaggagaat
ccattcatctgctcatcgcatcgtgaaaacggcatgcagaaatgctccaacatcccaaac
aggaaggagtacaaggtggagtgcaccttgagcatggactcctacaccccaagtttatac
aaccctgacttcagcagcaggaacgcctgcataaactggaaccagtattacaacgtatgc
atggcaggggacgtaaacccacacaacggagctatcaattttgataatatcggatatgcc
tggatagctatttttcaggttataaccctggaaggatgggttgacatcatgtattatgtg
atggatgcacattctttttacaattttatatattttatattgcttataatagttggttcc
ttcttcatgattaacttgtgcctggttgtgatagcaacacagttttctgaaacaaagcag
cgggagaaccagctgatgcaggagcagcgggcccgttatctctccaacgacagcacaatt
gccagcttctcggagccaggtagctgctacgaggagctgctcaagtacatctgccacatc
ttcaggaaggtgaaacggcggacaatacgtctgtacaataactggcagagtaagcgccgg
aaaaaagttaacccaaacagcaccacaaatgggcaaagccaccgaggcaaaaagcgcatc
acctccatacaccacctcatccaccatcaccatcaccaccaccatcaccactatcacatc
agcaatgggagccctcgggggccacggtccaaccctgagatctgcgacctggaactcaag
gtcatgaaacctggaggtcaattgatgcttccttctccatcgcccaacttgcagagccct
gctcctcctccagattcggagtctgtgcacagcatttaccatgcagactgtcatgttgaa
ggaccacaagtgaactgtaagtcttccaatgcccctgcaagcattaagctgactgccgga
ctctccaaccatggcaacatgaattatcctaccatcctgccttctccaactagcaaagcc
agttctattccggttcccaaaggaaagaagaatggcaattcacctgtggccgtggctaat
agccccgtaaatttgggcacggattcttatgggaagctgcagcaactggtaggagagcat
ggtctgcggcggacgcccagccggctgtcggggctgagcgcagcctgcccgctgcccagc
ccgccgggcggcaccctgacctgcgagctgcaggactgtcccttctgtgccagcctcctg
gaggaccccgagtttgccttcagcgagtccgacagctgcgactccgacagcaatggcgtc
tacgagttcacccaggacctgcagcacggcgaccacagagaccagctccagcagcagcgg
ggcaggaggaggaggaagaagaagaaacccaaggagaggaacaaggtcacccgcctgtgg
aaggctttcggcagcaagctgaagaggatcgtggagagcaagtatttcaaccgggggatt
atgatagccattctcatcaacacgctgagcatgggcatcgagtaccacgagcagccagat
gagttgaccaacgccttggagatcagtaatatcgtcttcacaagcatgtttgccctggag
atgctcctgaaactccttgcctttggcctcttcggctacatcaagaacccgtacaacatc
tttgatgggatcatagttgtcatcagtgtctgggagatcatcggccagtcggacggcggc
ctctctgtgctacgaacttttcggctgctccgggtgctgaaactggtgcgtttcatgccc
gccctccgtcgccagctggtggtcctgatgaagacaatggacaacgtagccaccttctgc
atgttgctcatgcttttcatctttatcttcagcattctcggcatgcatctttttggatgc
aagttcagcctgaaaaccgatacgggagacacagttccagatagaaagaattttgattcc
ttactttgggccattgtgaccgtatttcagatactgactcaagaagactggaatgtggtc
ctgtacaatgggatggcatctacatcctcatgggcagcactctactttgtggccctgatg
accttcggcaattatgtgctcttcaatcttcttgttgccattctggtagaaggcttccag
gctgagggtgatgccaataggtcagacacagatgaggacaaaacatctgccaacttcgat
gatgattttgagaagcttaaagacctccgagcaacagagatgaagatgtactcacttgcc
gtcaccccaaatggacacctggagggcaggggaagcatgccacctcctataatcatgcgc
actgctgccacaccaatgcccactccaaagtgttccccgcacatggattcagtgcacact
tttgtggactcaaggagagggagtaatgcttcgctagaccccttgagctacgatcagaag
tccttgtccagcctccgcagctccccttgtgccaactggggcaccagcagcaactgggga
agccgacgctcaagctggaatagcttgggcagagccccaagcctcaagaagaaaaaccag
tcaggagaaagagagtccttgctctccggggaggggaaaggcagcacagacgatgactct
gacgacgccaagtccagcacggtcagccggccctcgttgcaccgccgggcagagtccctg
gactgccgcagctccctggacctgcctgagctgctccagttgcccaccatgcgccactcg
ctcagtgtcagccccatggcagttctgcctgctgaataccaagactgcaacggcaagatg
gttcacgtccccagcgagttcttcttgcgtgtcgacggccacaaagaggatgccatggac
tatgaggatgacatggaggatagttactgctaccgaattcgtaaagtcctggagccctac
aaaccacagtggtgcaagagtcatgaagactggtccctctacttgttttccccacagaat
cggttccgaatgatgtgccagaaggtcattgcccacaaaatgtttgatcatgtggtgctg
gtcttcatatttctcaactgcatcactatagcactggagcgaccagacatagacccacac
agcacagaaaggatattcctaagtgtttctaattacatcttcactgcaatctttgtggct
gaaatgatggttaaggtggtagctcttggctttttctctggggagaacacctatctgcag
agcagctggaatgtcctggatggagtcctggtctttgtatctatcattgacattattgtc
tccatggcatcggcaggcggagctaagatcctgggtgtccttcgcgttttgaggcttctg
cggaccttgagacctctccgagtcatcagcagagccccaggtctgaagctggtggtagaa
accttgatctcctccttgaggcctattgggaatattgttctcatctgctgtgctttcttc
attatctttgggattttaggggtccagctttttaaaggcaagttctactactgtgatggt
cctgatgtaaaaaacatcactacgaagactgactgcactaacgcacgctacaaatgggtt
cgccggaagtacaattttgacaatttgggacaggccctcatgtccttgtttgtcctctcc
tccaaagatggctgggtgaacatcatgtatgatggtttggatgccgtgggtattgaccaa
cagcccatccagaaccataacccttggatgcttctctacttcatctccttcctgctcatc
gtcagcttcttcgtgctcaacatgtttgtgggagtggtggtggagaactttcacaagtgc
cgacaacaccaggaggcggaggaggcccggcgtcgggaggagaagcggctgagacgcttg
gagaaaaagcgcaggagtaaggagatatacctgtctgaagcccaacgtaggccttactat
gctgactattcaccagcacggaagtacattcacaccctctgcaccagccactatctcgac
ctcttcatcacattcatcattggggtcaatgtcatcactatgtcgatggagcactacaac
cagccaaagtccctggatgaagctctgaagtactgcaactatgtgttcaccatagttttt
gtgttcgaggcagttctgaagttggtggcatttggttttcgaaggttctttaaggacagg
tggaatcagctggatttggccatagttctcttatcaattgtgggaatcacgctggaggaa
attgagatgaacgctgcgctgcccatcaaccccacaataatacgcatcatgcgggtgctg
agaatagcaagagtgctgaaactgcttaaaatggccaccgggatgcgagctctcctggac
acagtggtacaagcacttccccaggtagggaaccttggcctactttttatgctcctgttt
tttatctatgctgccctgggagtggaattgtttggcaagctagactgcagtgaagaaaat
ccttgtgaaggtctgagccggcacgcaactttcaccaacttcggcatggcctttctcacc
ctcttcagggtgtcaacaggagacaactggaatggtatcatgaaggacactctccgggaa
tgcactcgggaagacaagcactgcctcagttacctgcctgttatctctcctgtctacttc
gtcacctttgtcctcatcgcacagttcgtcctagtcaatgtagtggtggcagtgctgatg
aagcatctggaggagagcaacaaggaggccaaggaggatgctgagatggatgctgagatc
gagttggagatgtccagaggagcaaccacctcggccaccagcgggagcaggggaggcgcg
gtggccccggagagcagagcaccctacagaagtcaggagaccatgaagtccgaatcagcg
gtgcaagtgaaacaccaagccctgggcggcacagcctctctgaggccacaggactctcaa
aacctgctgacggtccgcaagatctccgtttcccgtatgcactccttgcccaacgacagc
tacatgttccggccagtgatgccagcgaaagcccctttccccctccacgaggtggagatg
gaaacgtatccctgcaaatcccaaagagggtccatcacttccatccgctcccagcccgtg
ggaacgtgttcctctctgagagtcccaacggagtccctccagctggcagtccgttctccc
aaccatgaaggccgccaccgctggaagatccttccccctcatgtcacacctcgatctcct
actctcaacaagctgctgtgcagacaggaggccattcaaacagagtccgtggacggtcag
actccggaccgcaaggacagcctgcaagcagagcctggagagacgctaccgtcagcaaag
cagccccagagcaccttcacccccagcccgctccattccacggccgcctccctcccgggc
actcccccgcgctcccccccgtcctccccgcatcggcaccccagcacactcacacggaag
cacacttgcggccagcacggcgtccccagccggccgcccagccctggcggcagccctccc
aaccctgagggcagcctcttcgagtcctccgacctggctgacgaggaggtccgtcacatc
aacagctcggccaaagactggggaggggagcactcggacgctgggagccgctcgacttcg
ccgttcatctccccggccccgtctccggtgcccctcaagaactgcagcacaaccagcctc
tccaggagcagcagcaaggagaaggacttgaagaagttttacagcatcgatacgaagggc
ttcctcaacaagcccagctgggcagacgaccaaaggcgacactccattgagatctgcccc
tccatcagcgatggggactgtagctttgaggaccctgctgaggaaaagcagcggtcccct
gcccacatccagatggagtccgagtacatccatggagcccggaggaagaagaagatgagc
ccgccctgcatttctatagatcctcccatggaggacgacggcggggcggcctcgcgcacc
aaaccctccgagaacagcatgctgcggcgaaggaccccatcctgcgagttcccagcttac
agagagtccctggagctcgcggagaaccagcccggggagccggcctccaaagcggagcgc
cggggccagcccccgtgccgcggggagcacctgaccatccccaacttctcctttgagcag
ttggacggcagctccttgagcagcctctcggatctcctggacagcggtcagtccatgccg
ggctccgtggactcccggccggaccccgccgcctccgaactgaaaaagacggatcactta
aaaactcaatggagcaacgcggagaaaagcaaagagctcctgggcattgctaagagcccc
ctccagaagcaggacttggtcccggtgactgttgcaacagaagaagacatcgatgaccca
gtatag
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integrated database retrieval system
