Rissa tridactyla (black-legged kittiwake): 128913832
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Entry
128913832 CDS
T09443
Symbol
FUBP1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128913832 (FUBP1)
03041 Spliceosome [BR:
rtd03041
]
128913832 (FUBP1)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
128913832 (FUBP1)
Spliceosome [BR:
rtd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
128913832 (FUBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
Secretin_N
Motif
Other DBs
NCBI-GeneID:
128913832
NCBI-ProteinID:
XP_054068069
LinkDB
All DBs
Position
8:42134990..42171809
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AA seq
682 aa
AA seq
DB search
MADYSTVPPPASGAPGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSMNSNDYGYGG
QKRPLEDGDGSWTSPSSTTHWEGMPSPFKDQPDAKKVAPQNDSFGNQLPPMHQQQRSVMT
EEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKR
LLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMI
QDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPI
PRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDL
LRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSI
SQQSGARIELQRNPPPNADPNMKMFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGP
HGVVPGPHGPPGPPGPGAPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQPPN
PPDPGKPGTDPNSAAWAAYYAHYYQQQAQPPPAAPPGGPATTQTNGQGDQPNPAPAGQVD
YTKAWEEYYKKMGQAVPAPAGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAP
QCLPRPSTLGSAAKKQQTFNHH
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggcggactattccacggtgccccctcctgcttcgggcgcgcctgggggaggcggcggt
ggaggtggaggagtgaacgatgcctttaaagacgcgctgcagagggctaggcagattgca
gcaaaaatcgggggagatgctggcacatcaatgaattcaaacgactacggttatggagga
caaaaaagacctcttgaggatggagatggctcttggacaagtccgagcagtacaacacac
tgggagggaatgccctctccttttaaagatcaaccagatgctaagaaagttgctcctcag
aatgactcttttggaaatcagctaccaccgatgcatcaacagcaaaggtctgtgatgaca
gaggagtacaaagttccagatgggatggttggattcataattggcagaggtggagagcag
atctcacgtatacagcaagagtctggctgtaaaatacagattgcacctgatagtggaggc
ctgcctgaaagatcatgtatgctaactggaacaccagagtctgttcaatcagcaaaaaga
ttacttgatcagatagttgaaaaggggagacccgcacctggctttcatcatggcgatgga
cctggaaatgcagtccaagaaattatgattccagcaagtaaagcaggattagttattgga
aaaggtggagagacaattaaacaattacaggagcgagcaggtgtcaaaatggtcatgatt
caagatggtccacagaacactggtgcagacaagccccttaggataactggagacccttat
aaagttcaacaagccaaggaaatggtgctggagttaattcgtgatcaaggtggctttaga
gaggtgcgcaacgaatatgggtcaagaataggaggaaatgaagggatagacgtcccaata
ccacgatttgctgtaggtattgtaattggaagaaatggagagatgataaaaaagattcag
aatgatgctggtgttaggatccaatttaagccagatgatggaacaactccagatagaata
gcccaaatcacagggcctcctgacagatgtcagcatgctgcagaaattattacagatctc
cttcgaagtgttcaggctggtaaccctggtggaccaggacctggtggtcgaggaaggggt
agaggccaaggcaactggaacatggggcctcctggtggattacaggaattcaattttatt
gttcccactggcaaaactggattaatcattggcaaaggtggtgagactattaaaagcata
agccagcagtctggtgctagaatagaacttcaaagaaatcctccacctaacgcggatcca
aacatgaagatgtttactatccgtggaacacctcagcaaatagattatgcacgacaactt
atagaagaaaagattggaggtccagtaaatccattgggcccacctgttccccatggaccc
catggtgttgttcctggcccacacggacctcctgggccaccaggtcctggtgctcccatg
ggaccatataacccagctccttacaatccagggcctcctggcccagcacctcatggtcct
ccagctccgtatgctccacaaggatggggaaatgcttacccgcattggcagccaccaaat
ccaccagatccaggtaagccaggaacagatcccaattcagcagcgtgggcagcttattat
gctcactactatcagcagcaagcacagccaccacctgcagcccctcctggtggaccagct
acaacccaaactaatggacaaggagatcagccaaatccagcaccagcagggcaagttgat
tataccaaggcctgggaggagtactacaaaaaaatgggtcaagcagttcctgcccctgct
ggggccccgccaggtggtcagccggattacagcgcagcatgggctgagtactacaggcaa
caggcagcatattacgcccagacaagtccacagggaatgccacaacatcctcctgcacca
cagtgccttcccagaccttccaccttaggttctgctgcaaaaaagcaacagacatttaat
catcactga
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