KEGG   Rissa tridactyla (black-legged kittiwake): 128913905
Entry
128913905         CDS       T09443                                 
Symbol
IFT140
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
  KO
K19672  intraflagellar transport protein 140
Organism
rtd  Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:rtd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rtd03037]
    128913905 (IFT140)
Cilium and associated proteins [BR:rtd03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   128913905 (IFT140)
SSDB
Motif
Pfam: TPR_IF140-IFT172 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd TPR_IF140_C WD40_CDC20-Fz Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_EML WD40_WDHD1_1st Beta-prop_RIG_2nd WD40_Prp19 Beta-prop_HPS5 WDR55 Beta-prop_WDR90_POC16_2nd TPR_IFT80_172 WD40 Beta-prop_WDR75_1st TPR_COPA_B Beta-prop_CAF1B_HIR1 TPR_GEMI5 Clathrin Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st Beta-prop_DCAF12 EIF3I KNTC1_N WDR90_beta-prop_4th TPR_2 RLMM_N
Other DBs
NCBI-GeneID: 128913905
NCBI-ProteinID: XP_054068240
LinkDB
Position
8:18822619..18913554
AA seq 1456 aa
MAVYVDHRTEAPDSVASPSHIAWHPLHPLLAVASISTASGGCVDIYLEQGEHVSDAHVER
SFQVTSLSWHPSRPILAAGWETGEVVILNKQDKEHHAVPPSHDAKITVLNWSTDGTRLVS
GDRHGVLVLWRMDQRGRVQGPALLKQEYGKCLSHCVFRPPPPGEDLVQLAKAAVGGDEKA
LDMFNWRKAGTGAPLKMGLQEGLSFFITLTDGSVHYVNEKGKTRRVLSTDSLVQKLLFME
ERDVLVVITENLQLSLHAITLEGEAEELMKVKLSGKIGHSADIILIDRSLVVTALGETVI
RFWDLDRGENYVLSPDVQFGFEGGECINCVSYCSAKGLLAAGTNKGRIAMWRKAAGSRQS
VRALEGKEKWKLQAPTELEGNITQIKWGSRKNLLAVNNISSVVILSEQAMLSHFHQQVAV
VQVSPSLFNVTIFSTGTTHSLCVDMNVNGVFTTKDAVVFWNGKQVTVFECSGDTFRNAGS
FLCDSPVLAVHGENLYAVEPYRVQVRTWQGTVKQLLVFSEAEGNPCLLDVCGNFLAVGTD
LAHFKIFDLSRREAKVHCNSKNFSELFPGLGGIASVKCNANGDKVSILVSKADGNIDSKI
CFYDVEMDKVTLFDFKAEQGSGREKLSSGQGIEKSVVEYPELHSHIPACHFWDQSEPRLF
VCEAILETCLQSPDQKKNQTESTTDDWIISFFNTEEHGLLLHDSFPLPSSYQVLLGIEVP
HYYFAKKPGEAGIGQAEPDSIKVPQMVARRPMRDFIGLGDCDKTTQDAILNFSFYLTAGD
MDEAFKSIRLIKSEAVWENMARMCVKTQRLDVAKICLGKMGHARGARALREAEQEPEQEA
RVAMLAIQLGMLEDAERLYKACKRYNLLNKFYQASNQWQKAIETAEAHDRVHLRTTYYNY
AKHLEATGEHSLALTHYEKSDTHRFEVPRMLSEDLQALENYVNKTKDKSLWKWWAQYLES
QSDMESALKYYALAQDYFSLVRIYCFQGNIQKAAEIANETGNWAASYHLARQYESQDEIK
QAVHFYTRARAFNNAIRLCKENNLDDQLMNLALLSSPEDMIEAACYYEEKGEQMDRAVML
YHKAGHFSKALELAFATQQFGALQLIAEDLDEKSDPALLARCSDFFIEHAQYEKAMELLL
TAKKYHEALQLCLKQNLTITEEMAEKMTVSKGSKDFSEESRKELLEQIADCCMRQGNYHM
ATKKYTQAGNKLQAMKALLKSGDTEKIVFFAGVSGQREIYIMAANYLQSLDWRKDPEIMK
NIISFYTKGRALDLLAGFYEACAQVEIDEYQSYEKAQGALTEAYKCLSKAKTRSPLEQES
KLAHLQSKITLIKRFVHARRVYSEDPKEAVRQCELLLAEQDFDNAIRHGDILGLLVEHYV
QAEEFRMAYRYLEEMQKRIPPANLSYYVTQQTIEAVHRGAGVPLSRSLVSEQLRHGSVEN
KEEEEEEEVADEVEDP
NT seq 4371 nt   +upstreamnt  +downstreamnt
atggctgtgtacgtggatcatcggacggaagctcctgactcagttgcctccccttctcat
atagcgtggcacccacttcatccgctcctggcagttgcttccatcagcacagcatctggg
ggctgtgtggatatctacctggaacagggagaacatgtgtctgatgcacatgttgagaga
agctttcaggtcacatcgctttcctggcacccttcccgacccattcttgcagcaggttgg
gagacgggagaagttgtgatacttaataaacaagacaaggagcaccacgctgtaccacca
agtcatgacgccaaaattacggtcctaaactggagtacagatggtacccgccttgtgtct
ggcgataggcatggtgtcttggttctgtggcgaatggaccagcgaggcagagtgcagggt
cctgccctgctgaaacaagagtatggaaaatgtctgtcccactgtgtctttcgaccaccc
cctcctggcgaggaccttgtgcagctggcaaaagcagctgtgggtggtgatgagaaggcc
ttggatatgtttaactggagaaaagctggaacaggagcacctctgaaaatgggactccag
gaaggactgtccttcttcatcactttgacagatggttctgtgcattatgtgaatgagaaa
ggaaagacgaggcgtgtgttgtccacagacagtctggtccaaaagcttctcttcatggag
gaaagagatgttttagttgttataacagagaacctgcagctgtccttgcatgcaattact
cttgagggagaggcagaagagctcatgaaggtgaagttgagtgggaagataggtcattct
gcagacatcattttaatagaccgtagccttgttgttacagccctaggtgagacggtcatc
aggttctgggatttggaccgaggcgagaactatgtgctctccccagatgtgcaatttggc
tttgagggaggagaatgtattaactgtgtttcttactgcagtgcgaaaggtctcttggca
gctggtactaacaaagggagaatagctatgtggaggaaagcagcaggatcccgtcagagc
gtaagggctttggagggcaaggagaagtggaagctccaggcacctacagaacttgaagga
aacatcactcagataaagtggggctcccgaaaaaacctgctggcagtgaacaacatcagc
tctgtggtgatcctcagtgagcaggccatgttgtctcattttcatcagcaagtggctgtt
gtacaggtgtctcccagcctctttaatgtgaccatcttcagcacaggaaccacacacagc
ctttgtgttgatatgaatgttaatggagtcttcactactaaggatgccgtagtattctgg
aacgggaagcaagttactgtctttgagtgctcaggagataccttcagaaatgcaggctct
tttctttgtgactctccagttctggctgtgcatggagaaaatctgtacgcagttgagccg
tatcgggtccaggtccgcacttggcagggcacagttaaacagctgctggtgttctctgaa
gcagaggggaatccgtgcctcttggatgtctgcggaaatttcctggctgtgggaactgat
ttggctcactttaaaatctttgatctctctcgcagagaggcaaaagtgcactgcaatagc
aagaatttctctgagctgtttcctggccttggaggcattgcgtctgtcaagtgcaatgct
aatggcgataaagtcagcatcctcgttagcaaggcagatgggaacattgattccaagatc
tgtttctatgatgttgaaatggacaaagttacgctctttgatttcaaggctgaacaggga
agtgggagagagaagctttcttctggacaaggcattgaaaagtctgttgtagagtatcca
gagttgcacagtcacatccctgcttgccatttctgggaccagagcgaaccaagacttttt
gtatgtgaggcaattcttgaaacatgcctgcagtctccagaccagaagaaaaaccagact
gagagcacaacagatgattggattatctcattcttcaatactgaagagcacggccttttg
cttcatgacagctttccattaccttcatcctaccaggttcttctgggcatagaggtgcca
cattattattttgcaaaaaagccaggagaagccgggataggacaagcagagcctgactca
ataaaggtccctcagatggttgcgagaaggcccatgagagacttcattggattaggagac
tgtgataagactacccaggatgccatactgaacttcagcttctatctgactgctggagac
atggatgaggccttcaaatccatcaggctgataaaaagcgaggctgtctgggagaacatg
gctcgcatgtgcgtgaagactcagaggctcgatgttgccaaaatttgccttggaaaaatg
ggtcacgcgagaggagccagggcgctgagggaggctgaacaagaaccggagcaggaggcc
agagtggccatgctggccattcagctgggcatgctggaggacgcggagcggctgtacaag
gcttgcaaacgctacaacctcctgaacaagttctatcaagcctcaaaccagtggcagaaa
gccatcgaaacagctgaagctcacgatcgggttcacctacgcaccacgtactacaactac
gcgaagcacctggaggcaaccggagagcacagccttgcgctcacccactacgagaagtca
gacacgcataggttcgaggtacctcgaatgctctctgaagacttacaagccctggagaac
tacgtcaacaagacgaaagacaagagcctgtggaagtggtgggcacagtatctggagagc
caatcagatatggaatctgcgctgaaatactatgcgctggctcaggattatttttccctt
gtccgtatatactgctttcagggcaacattcagaaggctgctgaaatagcaaatgaaacg
gggaattgggcagcatcgtatcacttggcgcgccagtatgagagtcaggatgaaatcaag
caggctgttcatttctacaccagggcccgggcatttaacaacgccatccgcttgtgtaag
gagaacaatctcgatgatcagctgatgaacctggctcttctgagctctcctgaagacatg
atagaggcagcctgctattatgaggaaaagggggagcaaatggacagagccgtcatgtta
taccacaaggcaggacacttctccaaagcactggagctagcctttgccacgcagcagttt
ggggccctgcagctaattgctgaggacctggatgagaaatcagacccagccctgctagcc
cgctgttcggatttttttattgaacacgctcagtatgagaaggcaatggagttgctgctg
acagccaaaaagtaccacgaagctctgcaactttgcctgaagcagaacctgaccatcaca
gaggagatggctgagaagatgaccgtctcgaagggctccaaggacttctctgaggagtcc
cggaaggagctgttggagcaaattgccgattgctgcatgagacaaggcaattaccacatg
gcgaccaagaaatacacgcaagcagggaacaagctacaggcgatgaaggcactgctgaaa
tctggagataccgagaaaatcgtcttctttgccggagtttccggacaaagggagatttat
atcatggcagccaactatctacaatccctggattggcgtaaggaccccgagattatgaag
aacatcattagcttctataccaaaggaagggcccttgacctgttggcgggtttctacgag
gcgtgtgctcaggtagaaattgatgagtatcagagctatgagaaggcacaaggggcgctg
acagaagcatataagtgcctttcaaaagcaaagacgagaagccccctggaacaggaaagc
aaactcgcccatttgcaaagcaagatcaccctgattaaacgatttgtccacgcgcggaga
gtttactctgaagatcccaaagaagcagtcagacagtgtgaacttctcctagctgaacaa
gattttgacaatgccatccgccatggcgacatcctgggacttctggttgaacattacgta
caagcagaggaattccgtatggcttaccggtacctggaagagatgcagaaaagaattcca
cccgccaacctgagctactacgtgactcagcagaccatcgaggcagttcaccgcggagcg
ggcgttcccctaagccgaagcctggtttcagagcagcttcgccatggcagcgtggagaac
aaggaggaggaggaggaggaggaagtggctgatgaagtggaggacccctga

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