Rissa tridactyla (black-legged kittiwake): 128913960
Help
Entry
128913960 CDS
T09443
Symbol
CASKIN1
Name
(RefSeq) LOW QUALITY PROTEIN: caskin-1
KO
K21952
CASK-interacting protein
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128913960 (CASKIN1)
Membrane trafficking [BR:
rtd04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
128913960 (CASKIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_5
Caskin-Pro-rich
Caskin1-CID
Ank_4
SAM_2
Ank_3
Caskin-tail
SH3_2
Ank_KRIT1
SH3_9
SAM_TNK
SH3_1
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
128913960
NCBI-ProteinID:
XP_054068359
LinkDB
All DBs
Position
8:complement(7451011..7483321)
Genome browser
AA seq
1471 aa
AA seq
DB search
MGKDQELVQAVKAEDIAAVQKLLQRPKPGKAKLLGSAKRVNVNFQDTDGFSALHHAALNG
NTELISLLLEAQAAVDIKDNKGMRPLHYAAWQGKKEPMKMVLKAGSSVNIPSDEGQIPLH
LAAQHGHYDVSEMLLQHQSNPCIMDNSGKTPLDLACEFGRVGVVQLLLNSNMCAALLEPK
PGDATDPNGTSPLHLAAKNGHIDIIRLLLQAGIDINRQTKAGTALHEAALCGKTDVVRLL
LDSGINAHIRNTYNQTALDIVNQFTTSQASKEIKQMLRDASAALQVRAVKDYCNNYDLTS
LNVKAGDVITVLEQHADGRWKGCIHDNRTGNDRVGYFPSSLVEAISKRTGSRGADMSPSH
LSPSQGGSATPAPAEEIWVLRKPFAGGDRSSLGSTGSVASARSSGSGQSAGSGAHALHAG
SEGVKLLATVLSQKASAQETAVGDGPAKAQDIPAGSSRSQSVASSPYAPQPPAEPQLKKM
EPPSEGKSSEAVYQWLCKFQLQLYAPNFINAGYDITTISRMTPEDLTAIGVTKPGHRKKI
ASEINNLNIPEWLPEYKPANLALWLSMIGLSQYYKVLVENGYENIDFITDITWEDLQEIG
ITKLGHQKKLMLAVKKLAELQRAELGKYEPGTLKRKAAATCPEVLAIESPPPEPPECQSP
KMTTFQDSELSSELQVAMTGEAPEEPPEKAANPAAPGYHSPPGLGGRARLMSSSQELLGD
GPRVPPASAISKSQEYLAEGAGEGPAAPPKEVRPPRHGHPVKRASVPPVPGKPRQPFPPS
AGHLTPPQTPGKPRPPSPQGPPVPHATAKVKPTPQLLPPGERPASPRSLPQSPTHRGFAY
VLPQPTEGEGGPPGVPVLPVSVPVLCLPPAGEGEEEPGRPKKRAHSLNRYAASDSEQERD
ELLVPDAGPYATVQRRVGRSHSVRAPTGGDKNVNRSQSFAVRPKKKGPPPPPPKRSSSAI
SSAGMAEDFPKEGEGEVATGPPAAEGDSRREQRRASDLGGSVDTGSAGSVRSIAAMLEMS
SIGGGARALALQKPHGAGGPGPAKAPEGYYLQPGAPPGSPERARVATVLATVKHKEAIGL
DGEVVNRRRTISGPVTGLVAAARRERADSVRSEVGTDGPSERLRVERGGSPDGIPFAEEG
NLTIKQRPRPLGPARGEAGEGLSPAHRHGDLAKVEASATLKRRIRARQSQQDGVRFVLTE
SDTVKRRPKAKDKEPTLEPAPLAVYQNGTGTVKRRPASELSGAEPPPTPPPAARPDGPEY
ALPPAEPKKPFKPPVSPKPVLTQPPQKVSGPPAPIPKKVPIPSPGSPEVKRVHGTPPPVS
PKPVPPPTAPKPPKPHAAIQSVSASSTPAPSPARQLGATAAKPSSTPPSLCSSPAKPLSP
GAQPQQVPVKPPRSAIAGPSVDTAGPELAQQKLEETSASLAAALQAVEEKIKQEDSQAAD
SAVESKSTVSILDDIGSMFDDLADQLDAMLE
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggaccaggagctggtgcaggcggtgaaggcggaggacatcgcggccgtgcag
aagctgctgcagaggcccaagcccggcaaagccaagctcctcggatcggcaaaaagagtc
aacgtcaacttccaagacaccgacgggttctcagctctgcaccatgcggcactcaacgga
aacacggagctcatctcgctgctgctggaggcacaggctgcggtggacatcaaggacaac
aaaggcatgcggcccctgcactatgcggcttggcaaggcaagaaggagcccatgaaaatg
gtgctgaaagcgggttcctctgtgaacatcccatcggacgagggccagatccccctgcac
ctggcggcacagcacgggcactacgacgtgtcggagatgctcctgcagcaccagtccaac
ccctgcatcatggacaattcagggaagacgcccctggacctggcgtgcgagtttggccgg
gtcggggtggtccaactgctcctgaacagcaacatgtgcgcggcgctgctggagcccaag
ccgggggacgccaccgaccccaacggcaccagccccctgcacctcgccgccaagaacggc
cacatcgacatcatccggctcctgctgcaggctggcattgacatcaaccggcaaaccaag
gcaggcacggcgctgcacgaggcggccctctgcggcaagacggatgtggtgcggctgctg
ctggatagcgggatcaacgcccacatcaggaacacctacaaccagacggccctggacatc
gtcaaccagttcaccaccagccaggccagcaaggagatcaagcagatgctgcgggacgcc
tccgccgctctgcaggtccgggccgtcaaggactattgcaacaactacgacctgaccagc
ctcaacgtgaaagccggggacgtcatcaccgtgctggagcagcacgcggatgggcgctgg
aagggctgcattcacgacaaccggaccggcaacgaccgcgtgggctacttcccctccagc
ctcgtcgaggcaataagcaaacgaacagggtcccgcggggctgacatgagcccatcccac
ctctcaccgtcacaaggcggatcagccacgccggctcccgcggaggagatctgggtgctg
cggaaaccctttgcaggtggtgaccgcagcagcctgggcagcacgggcagcgtggcctct
gcccgcagctcggggagcgggcagagcgcaggcagcggggcacacgccctgcacgctggc
tctgaaggcgtcaagctgctggcaacggtcctttcccagaaggcttctgcgcaagagact
gccgtgggcgatgggccggccaaggcgcaggacatccccgcaggttcatcacggtcgcag
agtgtggccagctccccgtatgccccccagcctccggctgagccccagctgaagaagatg
gagccaccatcggaggggaagagctcagaggccgtgtaccagtggctctgcaagttccag
ctgcagctctacgcgcccaacttcatcaatgccggctacgacatcaccaccattagccgg
atgacgccagaggacctcacggccatcggtgtcaccaagccggggcacaggaagaagatt
gcctccgagatcaacaacctcaatatccctgaatggctgccggagtacaagccggccaac
ctggcgctgtggctctccatgatcggcctgtcccagtactacaaggtgctggtggagaac
ggctatgagaacatcgacttcatcaccgacatcacctgggaggacctgcaggagatcggc
atcaccaagctgggccaccagaagaagctgatgctggcagtgaagaagctggcggagctg
cagcgcgctgagctgggcaagtacgagccaggcacgctgaagaggaaggcagcggcgaca
tgcccggaggtgctggccattgagtctcccccaccagagccacccgaatgccagtcaccc
aagatgaccaccttccaggacagcgagctcagcagcgagttgcaggtggccatgacagga
gaagctcctgaggagccccctgagaaggcagcgaaccctgcagcccctggctaccactcg
ccacccgggcttggtggccgtgccaggctgatgagcagctcgcaggagctgctgggggat
ggcccccgggtcccccctgcctctgccatctccaagagccaggagtacctggcggagggg
gctggcgagggccccgctgcgccacccaaagaggtgcgcccaccccggcatggccacccc
gtcaagcgtgccagcgtgccaccagtgcccggcaagccccggcagcccttcccgccctcc
gccgggcacctgacgccgccgcagacccccggcaagccgcgacccccctccccacagggc
ccaccagtgccccatgccaccgccaaggtgaagcccaccccgcagctgctgccgccgggc
gagcggcccgcgtcaccccgctccctgccccagtcgcccacccaccgtggcttcgcctac
gtcctgccacagcccaccgagggtgaggggggacccccgggggtgcccgtcctgcccgtc
tcggtgccggtgctgtgcctgccaccggcgggtgagggcgaggaggagccggggcggccg
aagaagcgggcgcacagcctgaaccgctacgccgcctccgacagcgagcaggagcgggac
gagctgctggtgccggacgcggggccctacgccaccgtccagcggcgtgtggggcgcagc
cactcagtgcgggcacccaccggcggcgacaagaacgtcaaccgcagccagtcctttgct
gtccgccccaagaaaaaggggcccccgccgccccctccaaagcgctccagctctgccatc
tccagcgccggcatggctgaggacttccccaaggagggtgagggcgaggtggccactggg
ccacctgctgccgagggggacagccgccgggagcagcgtcgggccagcgacctgggcggc
agcgtggacacgggcagtgccggcagcgtgcgcagcatcgcggccatgctggagatgtcc
tccatcggcggtggggcccgggcactggcgctgcagaagccacatggggccggtgggcca
ggaccagccaaggcgcctgagggctactacctgcagccaggagcacccccaggcagccct
gagcgtgcccgtgtggccactgtcttggccaccgtcaagcacaaggaggcgatcgggctg
gatggggaggtggtgaaccggcgccggaccatcagcggacctgtcaccgggctggtggcg
gccgcccgccgcgagcgcgccgacagcgtgcggtcggaggtgggcactgacggccccagt
gagcggctgcgggtcgagcgtggcggctccccggacggcatcccctttgccgaggagggc
aacctcaccatcaagcagcggccgcggcccttggggccagcccggggagaggcgggtgag
gggctgtccccagcccaccgccatggggacctggccaaggtggaggccagcgccacgctc
aagcggcggatccgggccaggcagagccagcaggacggcgtccgctttgtcctcaccgag
tccgacactgtcaagcgccggcccaaagccaaggacaaggagccgacgctggaaccggcc
ccgctcgccgtctaccagaacggcactggcaccgtcaagcggcggccggcctccgagctg
agcggggctgagccaccccctaccccgccgcccgctgcccgccccgatggccccgagtac
gccctgccgcctgccgagcccaagaagcccttcaagccgccggtgtcccccaagcccgta
ctgacacagccgccccagaaggtgtctggaccgccggcacccatccccaaaaaggtgccc
atcccgagccccggcagcccagaggtgaagcgggtccacggcacgccgcctcccgtgtcc
cccaaacccgtgccgccccccacggcgcccaagccccccaagccccatgccgccatccag
tcggtgagcgccagctccacgccggccccgtcccctgcccgccagctgggtgccaccgcc
gccaagccctccagcacaccgccgtcgctctgctccagccctgccaagcccctctcgcct
ggcgcacagccccagcaggtgccggtgaagccgccgcgctccgctatcgccggcccctcc
gtcgacaccgccggccctgagctggcgcagcagaagctggaggagacgagcgcatccctg
gccgccgcgctgcaggccgtggaggagaagatcaagcaggaggacagccaggcggcagac
tcggccgtggagtcgaagagcaccgtgagcatcctggacgacatcggcagcatgttcgac
gacctggcggaccagctggacgccatgctggagtga
DBGET
integrated database retrieval system
