Rissa tridactyla (black-legged kittiwake): 128914246
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Entry
128914246 CDS
T09443
Symbol
RXRG
Name
(RefSeq) retinoic acid receptor RXR-gamma isoform X1
KO
K08526
retinoid X receptor gamma
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03320
PPAR signaling pathway
rtd04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
128914246 (RXRG)
03320 PPAR signaling pathway
128914246 (RXRG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtd03000
]
128914246 (RXRG)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rtd03310
]
128914246 (RXRG)
Transcription factors [BR:
rtd03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
128914246 (RXRG)
Nuclear receptors [BR:
rtd03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
128914246 (RXRG)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
128914246
NCBI-ProteinID:
XP_054068979
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All DBs
Position
8:complement(23421867..23462250)
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AA seq
512 aa
AA seq
DB search
MVESTEETGRRLEMQPGMQAPYSLEAGSFPHFYSPVHASSTSMSPSSSLSTGNSVDGHHN
YLEAPANASRALPSPMNAIGSPVNALGSPYRVIASSIGSHPVALSSAPGMNFVTHTSPQL
NILNNVSSSEDIKPLPGLPGIGNMNYPSTSPGSLAKHICAICGDRSSGKHYGVYSCEGCK
GFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRSRERS
ENEAESTSSGSEDMPVERILEAELAVEPKTEAYSDVNTESSTNDPVTNICHAADKQLFTL
VEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHS
AGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSSPSEVESLREKVYAT
LEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPL
QVWLGMGLRDLPETLGQPKSGQEDHSGYHCVC
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggttgagtctactgaggagacaggacgcaggttggaaatgcagccaggcatgcaggct
ccttattccctggaggcaggctccttccctcacttctattcccctgttcatgccagctcc
acatctatgagcccatcgtcaagcctttccacaggaaattcagtggacgggcaccacaac
tacctcgaggcccctgcaaacgcctcccgggcgctgccgtcccccatgaacgcgatcggg
tctccagtgaacgcactgggctcaccgtacagagtcatcgcgtcctccatcggctcacac
cccgtcgctctctcctcagccccgggcatgaattttgtgacacacaccagtccgcagctc
aacatcctgaacaatgtcagcagctcagaggacatcaagcctttgccaggtctcccaggg
atcgggaacatgaattatccatctacaagcccaggatccttagccaaacacatctgtgcc
atctgtggggacaggtcctcggggaagcactatggggtgtacagctgtgagggctgcaaa
ggcttctttaagaggacaatccggaaggacctgatctatacctgccgagacaacaaggac
tgcctcatagacaagcgccaacgcaaccgctgtcagtactgccgctatcagaagtgcctc
gcaatggggatgaagagggaagctgtgcaggaggagaggcagaggagcagggagcggagt
gagaatgaagccgagtccacaagcagtggcagcgaggacatgcctgtggagaggatcctg
gaagctgagctggcagtcgaacccaagacggaagcgtacagcgacgtgaacacagagagc
tcaacaaatgaccccgtcaccaacatatgtcatgcagctgacaagcagcttttcacactc
gttgagtgggccaagcgaatcccccacttctctgacctgactctggaggaccaagtcatt
cttctccgggcaggctggaatgagctgctcatcgcctctttctcccatcgctccgtctcg
gtgcaagatggcatccttctggccacaggcttgcacgtgcaccgcagcagtgctcacagt
gctggtgtgggctccatcttcgacagggttctgacagagctggtgtccaaaatgaaagac
atgcagatggataagtcggagctggggtgcctgcgagccattgtcctgttcaacccagat
gccaagggtttgtccagcccctcagaagtggaatcgctgagggagaaggtctatgccact
ctggaagcctacacaaagcagaagtaccctgagcagccggggcggtttgccaaactcctc
ctgcgcctgccagcgctgcggtccatcgggctgaaatgcctggagcacctcttcttcttc
aagctgattggggacacccccatcgacaccttcctcatggagatgctggagacacccctg
caggtctggcttgggatggggctgagggaccttcctgagactcttgggcaacccaaatca
gggcaggaagatcactcaggatatcactgcgtgtgctga
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