Rissa tridactyla (black-legged kittiwake): 128914345
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Entry
128914345 CDS
T09443
Symbol
SOX8
Name
(RefSeq) transcription factor SOX-8
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtd03000
]
128914345 (SOX8)
Transcription factors [BR:
rtd03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128914345 (SOX8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sox_N
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128914345
NCBI-ProteinID:
XP_054069189
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All DBs
Position
8:complement(6496344..6502151)
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AA seq
472 aa
AA seq
DB search
MLNMTEEHDKSLEAPCSPAGTTSSMSHVDSDSDSPLSPAGSEGLGCAPAPAPRPPGAAPL
GAKVDAAEVDERFPACIRDAVSQVLKGYDWSLVPMPVRGNGSLKAKPHVKRPMNAFMVWA
QAARRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQHKKDHPDYKYQP
RRRKSVKAGQSDSDSGAELSHHAGTQIYKADSGLGGMAESHHHGDHTGQTHGPPTPPTTP
KTDLHHGSKQELKHEGRRLVESGRQNIDFSNVDISELSSEVINNMETFDVHEFDQYLPLN
GHAAMPADHGPNAAAGSYGTSYSHSATGTGGTNQVWTHKSPASASPSSADSGQQRPHIKT
EQLSPSHYSDQSHGSPAHSDYGSYSAQACATTASTATAAASFSSSQCDYTDLQSSNYYNP
YPGYPSSIYQYPYFHSSRRPYATPILNGLSIPPAHSPTANWDQPVYTTLTRP
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgctcaacatgaccgaggagcacgacaaatcgctggaggctccgtgcagcccggcgggc
accaccagctccatgtcacatgtggactcggactccgactcgccgttgtcccccgccggc
tccgaggggctgggctgcgcccctgcgcccgccccgcgcccgcccggcgccgctccgctg
ggggccaaggtggacgcggccgaggtggacgagcggttccccgcctgcatccgcgacgcc
gtctcgcaggtgctgaagggctacgactggagcctggtgcccatgcccgtccgcggcaac
ggatcgctcaaggccaagccgcacgtcaagcggcccatgaacgccttcatggtgtgggcg
caggccgcccgcaggaagctggccgaccagtacccgcatctgcacaacgccgagctcagc
aagaccctgggcaagctctggcgtttgttaagcgaaaatgagaaacgtccctttgtggaa
gaagctgagcggctcagggtccagcacaaaaaggatcacccggattataaataccagcca
cggaggaggaaaagcgtaaaagctgggcagagcgactccgactccggagccgagctcagc
caccacgcaggcacgcagatctacaaagcggacagcgggctgggaggcatggccgagtcc
caccatcacggcgatcacacaggtcagacccatgggccgcccaccccacccaccaccccc
aaaactgacctccaccacggcagcaagcaggagctgaagcatgagggccgccgcctcgtg
gagagcggccgccagaacatcgacttcagcaacgtggacatctctgagctgagcagcgag
gtcatcaacaacatggagacctttgacgtgcatgagtttgaccagtacctgccgctcaac
ggccatgccgccatgccagccgaccatggccccaacgccgctgccggctcctatggcacg
tcctactcccactcagccacgggcaccggtgggaccaaccaggtctggactcacaaaagc
ccagcctcggcgtcaccatcgtccgctgactcgggccagcaaaggccgcacatcaaaacg
gagcagctgagccccagccactacagcgaccagtcccacggctcccccgcacactccgac
tatggctcctacagtgctcaggcatgtgccacgactgcctccaccgccacggccgctgcc
tccttctccagctcccagtgtgactacacggacctccagagctccaactactacaacccc
taccccggctacccctccagcatttaccagtatccctatttccactcttcccgccgtccc
tacgcaacacccatcctcaacggcttgtccatcccgccggcccacagccccaccgctaac
tgggaccagccagtctatacgaccctgacgaggccttaa
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