Rissa tridactyla (black-legged kittiwake): 128914366
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Entry
128914366 CDS
T09443
Symbol
PHGDH
Name
(RefSeq) D-3-phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd00260
Glycine, serine and threonine metabolism
rtd00270
Cysteine and methionine metabolism
rtd01100
Metabolic pathways
rtd01200
Carbon metabolism
rtd01230
Biosynthesis of amino acids
Module
rtd_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
128914366 (PHGDH)
00270 Cysteine and methionine metabolism
128914366 (PHGDH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtd04147
]
128914366 (PHGDH)
Enzymes [BR:
rtd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
128914366 (PHGDH)
1.1.1.399 2-oxoglutarate reductase
128914366 (PHGDH)
Exosome [BR:
rtd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128914366 (PHGDH)
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Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
PGDH_inter
Motif
Other DBs
NCBI-GeneID:
128914366
NCBI-ProteinID:
XP_054069232
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Position
8:24536862..24540620
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AA seq
529 aa
AA seq
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MALGKLQKVLISDSLDPCCREILQAGGLRVQEKPGLSKEELLREIRDCDGLIVRSATKVT
ADVLEAAERLQVVGRAGTGVDNVDVEAATRKGVLVMNTPAGNSLSAAELTCGMILSLARQ
IPQAAASMKEGKWDRKKYMGMELNGKTLGVLGLGRIGREVATRMQAFGMKTIGYDPIITP
EVSATFGVEQLPLEQIWPRCDFITVHTPLLPSTTGLLNDSTFAKCRRGVQVVNCARGGIV
DEGALLRALQSGQCGGAALDVFTQEPPKDRELVNHPNVISCPHLGASTREAQSRCGKEIA
MQIVDMATGKGLAGVVNGQALSKAFAPQTKPWIALARALGTVLRTVGKKAQGSVQVCTLG
TPLQEAGSYLAPAVAAGMLAGGAQKEVTLVNAQLLAQEAGLKVTTTHSDVAPEPDGGTGL
LQVALQGTPYRATGTVQGSAPVLRELNGATFKQPAPLAGPVLIYRAKASEPSALPTLAGM
LGKVGVQLQSYHSSAIVAGEQWSLVGLSAPLSDLGELKPRVTEVFQLHL
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggggaagctgcagaaggtgctgatcagcgacagcctggacccctgctgccgg
gagatcctgcaggccggcgggctgcgggtgcaggagaagcccgggctgagcaaggaggag
ctgctgcgggagatccgggactgcgatgggctcatcgtccgctcggccaccaaagtcacg
gccgacgtgctggaggcggcggagaggctgcaggtggtgggcagagcgggcaccggcgtg
gacaacgtcgatgtggaggcagccaccaggaaaggtgtcctggtcatgaacacgcccgct
gggaacagccttagtgccgccgagctcacctgtgggatgatcctgtccttggccaggcaa
atcccgcaggcagctgcctccatgaaggagggcaagtgggaccgtaagaagtacatgggc
atggagctgaacgggaagacgctgggcgtgctggggctggggcgcatcggcagggaggtg
gccacccgcatgcaggcttttggcatgaagaccataggctacgaccccatcatcaccccc
gaagtctcggccacctttggtgtggagcagctgccactggagcagatctggccccgctgc
gacttcatcacggtgcacacaccgctgctgccctccaccacggggctcctgaacgacagc
accttcgccaagtgccgccgcggcgtgcaggtggtgaactgtgcccgcggcggcatcgtg
gacgagggcgcgctgctgcgggcactgcagtcggggcagtgtggcggggctgccctcgat
gtctttacgcaggagcccccgaaggaccgtgagctggtgaaccaccccaacgtcatctcc
tgcccgcatctgggcgccagcacgcgggaggcgcagagccgctgcggcaaggagattgcc
atgcagatcgtggacatggccacagggaaggggctggctggcgtagtcaacgggcaggct
ctcagcaaggctttcgcgccccagaccaagccctggatagccctggccagggccctgggc
acggtgctgcgcacggtgggcaagaaagcgcagggcagcgtgcaggtctgcaccctgggg
acacccctgcaggaggccggaagctacctggcgcccgccgtggccgcgggcatgctggcc
ggcggggcgcagaaggaggtgaccctggtgaacgcccagctgctggcccaggaggctggg
ctgaaggtcacgaccacccacagcgacgtggcccccgagcccgatggcggcaccggcttg
ctgcaggtggccctgcagggcaccccgtaccgggcgacggggacggtgcagggcagtgcc
ccggtcctgcgggagctcaatggggccaccttcaagcagccggccccgctggccggcccc
gtcctcatctacagagccaaagcctccgagcccagcgcgctgcccacgcttgctgggatg
ctggggaaggtgggggtccagctccagtcctaccacagctctgccatcgtggcgggggag
cagtggagcctggtggggctctcggcccccctgtccgaccttggcgagctgaagccgcgc
gtcacggaggtcttccagctccacctgtag
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