KEGG   Rissa tridactyla (black-legged kittiwake): 128914401
Entry
128914401         CDS       T09443                                 
Symbol
RAC1
Name
(RefSeq) ras-related C3 botulinum toxin substrate 1
  KO
K04392  Ras-related C3 botulinum toxin substrate 1
Organism
rtd  Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04010  MAPK signaling pathway
rtd04145  Phagosome
rtd04148  Efferocytosis
rtd04310  Wnt signaling pathway
rtd04370  VEGF signaling pathway
rtd04510  Focal adhesion
rtd04520  Adherens junction
rtd04530  Tight junction
rtd04620  Toll-like receptor signaling pathway
rtd04810  Regulation of actin cytoskeleton
rtd05100  Bacterial invasion of epithelial cells
rtd05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rtd00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    128914401 (RAC1)
   04310 Wnt signaling pathway
    128914401 (RAC1)
   04370 VEGF signaling pathway
    128914401 (RAC1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    128914401 (RAC1)
   04148 Efferocytosis
    128914401 (RAC1)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128914401 (RAC1)
   04520 Adherens junction
    128914401 (RAC1)
   04530 Tight junction
    128914401 (RAC1)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    128914401 (RAC1)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    128914401 (RAC1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    128914401 (RAC1)
   05100 Bacterial invasion of epithelial cells
    128914401 (RAC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rtd04131]
    128914401 (RAC1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rtd04147]
    128914401 (RAC1)
   04031 GTP-binding proteins [BR:rtd04031]
    128914401 (RAC1)
Membrane trafficking [BR:rtd04131]
 Exocytosis
  Small GTPases and associated proteins
   Rho GTPases
    128914401 (RAC1)
 Endocytosis
  Lipid raft mediated endocytosis
   Arf6-dependent endocytosis
    128914401 (RAC1)
  Macropinocytosis
   Ras GTPases
    128914401 (RAC1)
 Others
  NADPH oxidases (Nox) and associated proteins
   Nox associated proteins
    128914401 (RAC1)
Exosome [BR:rtd04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128914401 (RAC1)
  Exosomal proteins of other body fluids (saliva and urine)
   128914401 (RAC1)
  Exosomal proteins of colorectal cancer cells
   128914401 (RAC1)
  Exosomal proteins of bladder cancer cells
   128914401 (RAC1)
GTP-binding proteins [BR:rtd04031]
 Small (monomeric) G-proteins
  Rho Family
   Rac/Cdc42 [OT]
    128914401 (RAC1)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU CagD
Other DBs
NCBI-GeneID: 128914401
NCBI-ProteinID: XP_054069321
LinkDB
Position
8:complement(392486..407573)
AA seq 192 aa
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR
DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP
PVKKRKRKCLLL
NT seq 579 nt   +upstreamnt  +downstreamnt
atgcaggccatcaagtgtgtggtggtgggcgacggtgctgtaggtaaaacatgcctactc
atcagttacacgaccaatgcatttcctggagaatatatacccactgtttttgacaactac
tctgctaatgtaatggttgatggaaaaccggtcaatctgggtttgtgggatacagctggt
caagaggactatgacagactacgtccgctctcctacccacaaacagatgtcttcttaatc
tgcttttcccttgtgagccctgcttcctttgaaaatgtccgtgctaagtggtatcctgag
gtgcggcaccattgccccaacacccccatcattttagtgggtaccaaactcgatctccgg
gatgacaaggacactattgagaagctgaaggagaagaagctgactcccatcacctaccca
cagggccttgccatggcaaaggagattggtgcagtgaaatacctcgaatgctcagcactt
acgcagcggggcctcaagacagtgtttgacgaagcgatccgagcagttctgtgcccccct
cctgtaaagaagaggaagagaaaatgtctgctgctgtaa

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