Rissa tridactyla (black-legged kittiwake): 128914482
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Entry
128914482 CDS
T09443
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03013
Nucleocytoplasmic transport
rtd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128914482 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
128914482 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128914482 (THOC2)
03041 Spliceosome [BR:
rtd03041
]
128914482 (THOC2)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
128914482 (THOC2)
Spliceosome [BR:
rtd03041
]
Complex C
Other components
EJC/TREX
128914482 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
128914482 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
128914482
NCBI-ProteinID:
XP_054069455
LinkDB
All DBs
Position
9:37944078..38001967
Genome browser
AA seq
1594 aa
AA seq
DB search
MAALLPAEWIKNWEKGGKNEFVQLCRALSENKSHDNMGFRDIQQALYELAYHVVRGNLKH
DQASNVLGDIIEFREDMPSILADVFCILDIETSCLEEKSKRDHFTQLVLACLYLVSDTVL
KERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDL
SGNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQT
LCHILGFKFKFYQDPSGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREI
VEAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWQHAQS
IMDQMPPFYATSHKPIAIALCQLVHVTIEPLYRRVGVPKGAKGSPISSLPNKRAPKQADS
FEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEFQSDGSKQEDREKMEILFSCL
LSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKA
QTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKY
LTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQY
VANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTK
KSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGF
LASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQ
HKVHKYITSCELVMAPVHDAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREV
NKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNW
LLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSD
IIYTVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGN
KADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQA
LERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPFMIPENEFHHKDPPARNAVAATVQN
GPGGAGMPTSLTINTVRLEEGTTEETDKLKEKSQGVVKVINKTVNATPKVTTSNGNSASN
SKIIKEKDDKEKSGKEKDKEKKDKTPAATPEMKALGKDGKDKPKEERANKDDKAREIKEK
TPKSDKEKEKVKKEEKASKEEKSKTVVTIVESKSTAEKEREKEPSRERDVAKEIKAKENA
KGGEKMPVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSSTVKDSLNELKDSSAKHY
INHTTPTLSKSKEREVDKKDLDKSRERSREREKKDEKDRKDRKRDHSNSDREVPQDSTKR
RKEENGTTGSSKHSKSESPSDSPRLNEKEKEKNKSKSSGKEKGDSIKAEKMEKSSSGSKK
ESRHDKEKTEKKEKRDSTGGKEEKKHHKSSDKHR
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgctccctgccgagtggataaagaactgggagaaagggggcaagaacgag
tttgtgcaactatgtcgcgctctcagtgaaaacaaaagccatgataatatgggtttcaga
gatatccaacaggctttgtatgagcttgcataccatgttgtcagaggaaacttaaagcat
gatcaagcttctaatgttctcggtgatatcatagaatttcgggaagacatgccttccatt
ctagctgatgtattctgcatattagatattgaaacaagttgtttagaagaaaagagcaag
agggatcattttacccaactggtattagcctgtttgtatcttgtatctgacactgtccta
aaggagcgtttagatccagagacactggagtcattaggacttatcaagcagtctcaacag
ttcaatcagaaatctgttaaaataaagacaaaactattttataagcaacagaagtttaat
ttgttaagagaggagaatgaaggttatgcaaagctcattgcagaacttgggcaagactta
tctggaaatatcactagtgatttaatccttgaaaatatcaaatctttaataggatgtttt
aaccttgatccgaacagagttttggatattatcctagaagtctatgagtgcaggcctgag
tatgatgacttctttgtaccactgatagagtcttacatgtacatgtgtgaacctcaaact
ctatgccatatccttgggttcaaattcaaattttatcaggatccaagtggtgagacacct
tcctccttatacagagttgctgctgtccttttgcaacataatctcatagatttggaagac
ctttatgttcatctccttccaggggataatgccatcattgaggaacacaagcgagagata
gtggaagcaaagcaaattgtcagaaaacttacaatggttgtcttatcctctgaaaagact
gaggaaaaggagaaggaaaaagaaaaagaagaggagaaaactgaaaagcctcctgataat
caaaagcttggtttattggaagctttattaaaaattggtgattggcagcatgcacaaagt
attatggatcagatgcctccgttttatgctacttcacacaagcctattgcaattgccctt
tgccaacttgtacatgtgacaattgaaccactgtaccgcagagttggtgtacctaaagga
gctaaagggtcaccaatttcttctttgccaaacaagagagcaccaaaacaagcagacagc
ttcgaggacttgaggaaggaagtgttcaacatgctttgttatcttggtcctcacctctcc
catgatcccattttatttgcgaaagtggtgcgccttggaaaagcatttatgaaagagttt
cagtctgatggaagcaagcaagaagatagagagaaaatggagatactgtttagctgtttg
ttgagtattaccgatcaagttttacttccgtctctttctttgatggactgcaatgcatgc
atgtctgaggaattatgggggatgttcaaaacttttccgtaccaataccggtaccgtctt
tatgggcaatggaagaacgaaacatacaatagtcacccacttctagtgaaagttaaagct
caaaccatagaccgagccaaatatatcatgaagcgtttaactaaggaaaatgtgaaaccc
tctggaagacaaattgggaagctcagccacagcaatcctacaattttatttgattatatt
ttatcacaaatacaaaaatacgataacttaataactccggttgttgattcactgaaatac
ctcacttcgctgaactacgatgtcttggcatactgtataattgaagctctggcaaacccc
gagaaggagagaatgaagcatgacgacactacaatctcgagctggctgcagagtctggct
agcttttgtggtgcagttttccgaaaatacccaattgaacttgctggtctacttcaatat
gtagccaaccaactgaaagctgggaaaagctttgatttgcttattttaaaagaggtagtg
cagaaaatggcagggatagaaattacagaagaaatgacaatggaacaattagaagccatg
actggtggagaacaactaaaagctgagggtggatactttggccaaatcaggaatacaaag
aaatcttctcagagattgaaagatgcattgttggaccatgatcttgcccttccactctgc
ctgcttatggctcaacagagaaatggtgtgatctttcaagagggaggggaaaaacatctg
aagctggtgggaaaactgtatgatcagtgccacgataccctggtacaatttggtgggttt
ttagcatccaatctcagcacagaggattacattaagcgagtgccttctattgatgttctc
tgtaacgagtttcacacacctcacgatgctgcatttttcctctcaagacccatgtatgca
caccatatttcatcgaagtatgatgaactaaaaaaagctgagaagggaaataaacagcag
cacaaagttcacaaatacattacatcgtgtgagctggtgatggctcctgttcatgatgct
gtgatttctctgcaccttcccaaggtttgggatgacatcagtcctcagttttatgctaca
ttctggtctttgacaatgtatgaccttgccgtcccacatagtagctatgacagagaagtc
aataaacttaaagtccagatgaaagccatagatgacaatcaggaaatgcctccaaataaa
aagaaaaaagaaaaagaacgttgcacagctcttcaggacaagctccttgaagaggagaag
aaacagttggagcatgtgcagagggttctacagagactgaaactggagaaggataactgg
ctcctggcaaagtctaccaaaaatgagactatcacaaaatttttgcaattatgtatattt
cctcgatgcattttttcggcaatcgatgcagtttactgcgctcactttgtagaactggtg
catcaacagaaaacacccaatttctccacgcttctctgctatgacagagttttctctgat
attatatatacagttgcaagttgcactgaaaatgaagctagtagatacggcaggttttta
tgttgtatgctggagactgtgactagatggcacagtgacagagttatatatgaaaaggaa
tgtggcaactatccaggcttcctaactatattacgggcaactggatttgatggtggaaat
aaagctgatcaattggattatgagaattttagacatgtggtacacaaatggcactataaa
ttaactaaggcttctgtgcactgccttgaaacaggtgaatatacacatatcagaaatatc
ctgattgtgctgaccaaaatccttccgtggtatccaaaagtgctgaacctgggacaagca
ttggaaagaagagtgcataagatatgtcaggaagagaaagagaagagacctgatctatat
gcattggctatgggctattctgggcagttgaaaagtaggaagccgttcatgatacctgaa
aatgaattccaccacaaagacccacctgccaggaatgctgtagctgcaacagtacaaaat
gggccaggtggtgctgggatgcctacatctctcacaataaatacagttagactggaagaa
ggcactactgaggagactgataaactaaaggagaagtctcagggtgtggtgaaagttatt
aataaaactgtcaacgctacaccaaaggtgacaacaagcaatggaaacagtgcttctaat
agcaaaattattaaagagaaagatgataaagaaaaaagcgggaaggagaaagataaagaa
aaaaaagacaagactccagctgccactccagagatgaaggcacttgggaaggatgggaaa
gataaaccaaaggaagaacgggcaaacaaagatgataaagcaagagagatcaaggagaaa
acgccaaaatctgacaaagagaaggaaaaagtcaagaaagaagaaaaagcttcaaaagaa
gaaaaatccaagacagttgttaccatcgttgagtcaaagtcaaccgcagaaaaggagaga
gaaaaggagccgtccagagaaagagatgtagcgaaggaaattaaagccaaggaaaatgct
aaaggaggagaaaagatgccagtagctgggtccttgaagtcacctgttccccgatcagaa
acatcagaatctgagagggaacaaaaacgccgcaaagttgatacacactcttctccatca
cattcctcaacagtaaaggacagcctcaacgaactcaaggactcttcagcaaagcactac
attaaccacactactccaacactgtccaagagtaaggagagagaagtggacaagaaagat
ttggacaagtcaagggaaagatccagagagagagagaagaaagatgaaaaggacaggaaa
gatcgaaaaagggatcattcaaacagtgaccgagaggtaccgcaggattcaactaaacga
cgcaaagaggaaaatgggacaactggttcttcaaaacatagtaagagtgaaagtccttct
gattcccctcgcttaaatgaaaaggagaaggagaagaacaaatcaaagtcttcaggaaaa
gagaaaggtgattcaattaaagcagaaaagatggagaagagctcctctggtagcaaaaag
gaatcaagacatgataaagaaaaaacagaaaagaaagaaaaacgagacagtactggaggg
aaagaagaaaagaagcatcataaatcttcagacaagcacagataa
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integrated database retrieval system
