Rissa tridactyla (black-legged kittiwake): 128914485
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Entry
128914485 CDS
T09443
Symbol
CUL4B
Name
(RefSeq) cullin-4B isoform X1
KO
K10609
cullin 4
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03420
Nucleotide excision repair
rtd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128914485 (CUL4B)
09124 Replication and repair
03420 Nucleotide excision repair
128914485 (CUL4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128914485 (CUL4B)
03400 DNA repair and recombination proteins [BR:
rtd03400
]
128914485 (CUL4B)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtd04147
]
128914485 (CUL4B)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
128914485 (CUL4B)
DNA repair and recombination proteins [BR:
rtd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
128914485 (CUL4B)
TCR (transcription coupled repair) factors
Cul4-CSA complex
128914485 (CUL4B)
Exosome [BR:
rtd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128914485 (CUL4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
128914485
NCBI-ProteinID:
XP_054069465
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All DBs
Position
9:38699307..38725922
Genome browser
AA seq
886 aa
AA seq
DB search
MITSGFSSPNPPAAAQEVRPATDGNTSSSSSCKKRKLNNSSNSNSEREEFDSISSCASSP
SKNTSSSSSVISTSSCSSSGVASSNHHLQKKLRFEDSVDFIGLDVKMAEESSSSSSPAAS
SQQQHQQQLKNKSLLISSVAVGHHANGLTKAASSTVSSFANSKPGSAKKLVIKNFKDKPK
LPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYKQLRQICEDH
IKAQIHQFREDSLDSVLFLKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDM
GLELFRTHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEH
RFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADRIITYLDQSTQKPLIATVEKQ
LLGEHLTAILQKGLNHLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVI
NPEKDKTMVQELLDFKDKVDHIIDVCFLKNEKFVNAMKEAFETFINKRPNKPAELIAKYV
DSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEK
SMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQNVPGNIELTVNILTMGYW
PTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSL
FQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKARVLTKSPKGKDVEDGDK
FTCNDDFRHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHN
LLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENPNQYNYIA
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgatcacttccggtttctcttcccccaaccccccagctgcagcccaggaggtcagacct
gccactgatggtaataccagcagcagctcctcctgcaagaagagaaaattaaataacagc
agcaacagcaattctgaaagagaagaatttgattccatttcttcctgcgcctcttctcct
tccaaaaacacctcatcatcttcctccgtcatcagcacctcctcgtgttcctcctcaggg
gttgcctcctctaaccatcacctccagaagaagctgcgctttgaggactccgtggatttt
attggactagatgtaaagatggctgaagagtcttcttcctcctcttctcctgctgcctct
tctcaacagcagcaccaacaacagctcaaaaataaaagccttttaatttcatcagtggct
gtggggcaccatgcaaatggcctgaccaaagctgcctcctctactgtttccagtttcgcc
aacagtaaacctggctctgctaagaaattagtgatcaagaactttaaagataagcccaaa
ttgcctgaaaactacacagatgaaacctggcaaaaactgaaagaagctgtagaagctatc
cagaacagtacttcaattaagtacaatttagaggagctctatcaggctgttgaaaatctc
tgctcctacaagatttctgcaaatttgtacaaacaattgagacagatctgtgaagaccac
attaaagcacaaattcaccaattcagagaggattcattggatagtgtcctttttctaaag
aaaatagacaaatgttggcaagaccactgcagacaaatgattatgattagaagtatcttt
ttgttcttggatcgaacttacgtacttcagaattcaatgctgccatctatttgggatatg
gggctagaattgttcagaactcatataatcagtgatcagaaggttcagaacaaaactatt
gatggcattcttctgctgattgagagggaaagaaatggtgaggctattgataggagttta
ctgcgaagccttctaagcatgctttctgacttgcagatttatcaagactctttcgaacat
agattcttggaagagactaaccgcctgtatgcagcagagggacagagacttatgcaggaa
cgagaggttccagaatatcttcatcatgtcaacaagcgcttggaagaagaagcagacagg
ataatcacttatttagatcagagcacacagaagccactaattgctactgtagaaaagcaa
cttctaggtgaacatttaacagccatccttcagaaaggtttaaaccaccttcttgatgaa
aaccgaattcaagacctgtctcttctgtatcagttgttcagtcgtgtgagaggcggagta
caggttctcttgcaacactggattgagtacataaaggcatttggtagcaccatagtaatt
aatccagaaaaagacaaaaccatggtccaagaactacttgattttaaagacaaagttgac
catattattgatgtttgctttctcaagaatgagaagtttgtaaatgccatgaaagaagcc
tttgaaacattcattaacaaaagaccaaataagccagctgaactcatagctaaatatgta
gattcaaagcttcgtgcaggcaacaaagaagctactgatgaagaacttgaaaaaatgctg
gataaaattatgatcatatttagattcatatatggaaaagatgtctttgaggccttttat
aaaaaagatctagcaaagagactattagttgggaagagtgcatcagtagatgctgaaaaa
tctatgctttccaaactcaaacatgaatgtggagctgctttcaccagcaaacttgaagga
atgtttaaagatatggagctttcaaaagacataatgatacaatttaaacagtatatgcaa
aatcagaatgtacctggcaacattgaactaacagtgaatattctgactatgggttattgg
ccaacctacgtgcctatggaggtccatttacccccagagatggtaaaactgcaggagatt
ttcaagaccttttatttaggaaaacacagtggtaggaaacttcagtggcagtcaacacta
ggacactgtgtactaaaagcagaatttaaagagggcaaaaaagaacttcaggtctccttg
ttccagactctggtgctgctcatgtttaatgaaggagaggagttcagtttagaggagata
aagcaagccactgggatagaggacggagagctgagaaggacccttcagtctctggcttgt
ggtaaagccagagtactgactaaaagtcccaaaggcaaagatgtggaagatggtgataaa
ttcacatgtaatgatgatttcagacataagctcttcaggataaagatcaaccaaattcag
atgaaagaaacggtagaggaacaggcaagcactacagagagagtattccaggaccggcaa
taccagattgacgctgcaattgtacgaatcatgaagatgcgcaagacactgagtcataac
ctgcttgtgtcagaggtctacaaccagcttaaattcccagtaaagccagctgaccttaag
aagagaatagaatcgttaattgacagggactacatggaaagagataaagaaaacccgaat
cagtacaactatattgcataa
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