Rissa tridactyla (black-legged kittiwake): 128914569
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Entry
128914569 CDS
T09443
Symbol
EDC3
Name
(RefSeq) enhancer of mRNA-decapping protein 3
KO
K12615
enhancer of mRNA-decapping protein 3
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128914569 (EDC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128914569 (EDC3)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128914569 (EDC3)
mRNA degradation factors
5'-3' decay
Decapping complex
128914569 (EDC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Edc3_linker
FDF
YjeF_N
LSM14
DUF5096
Motif
Other DBs
NCBI-GeneID:
128914569
NCBI-ProteinID:
XP_054069706
UniProt:
A0A7L3T4M5
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Position
9:complement(24198194..24227481)
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AA seq
506 aa
AA seq
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MATDWLGSIVSINCGESLGVYQGRVSAVDQVSQTISLTRPFHNGVKCLVPEVTFRAGDIT
ELKILEIPGPGDSRQCGDLQQTEMGIPGVGCQVGPSQNGTGKVLKKPISSSAPQNIPRRT
DMKNQDIIISPQQQCSKSYMDRHVETLTQSKGFRRRHNSWSSSSRHPNQVTPKKSGLKNG
QMKSKDDECFGDDIDEIPDTDFDFEGNLALFDKAAVFEEIETYERRSGTRSRGTPNEKPA
RYRHDENILESEPIVYRRIVVPQNANKEFCTDSGLVVPSVSYELHKKLLSVAEKHGLTLE
RRLEMTGVCASQMALSLLGGPNRLNPKNVHQRPTVALLCGPHVKGAQGISCGRHLSNHDV
HVILFLPNFVKMLESITNELNLFSKTQGQQVSSVRDLPDTPVDLVINCLDCHENAFLRDQ
PWYKAVVDWANQNRAPVLSIDPPINEMEQGIDAKWSLALGLPLPLGERAGRVYLCDIGIP
QKVFQEVGINYHSPFGCKFVIPLHST
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggctacagactggctcgggagcattgtgtcaattaattgtggagaaagcttgggagtc
taccaaggacgagtgtctgctgtggatcaggtcagccagaccatttctctgacacggccc
ttccataatggggtcaaatgcctggtgccagaagtcaccttcagggcgggtgacatcact
gagctgaaaattctggagatcccgggaccaggagacagcagacaatgtggggacctgcag
cagacagaaatgggcatccctggcgtcggatgccaagtgggtcccagtcagaatggcact
gggaaagtgttaaagaagcccatctccagcagtgccccgcagaatatcccaaggagaaca
gacatgaagaatcaggatatcatcatctctccccagcagcagtgctccaagagctacatg
gatcgacacgtggaaacattgactcaatccaaaggcttccggcgtagacacaattcctgg
tcgtccagtagccgtcacccaaaccaagtgaccccaaagaagagcggcctgaaaaatggg
caaatgaagagcaaagatgatgaatgctttggggatgacattgacgaaatcccagacaca
gattttgatttcgaagggaatctggccctttttgacaaggcagctgtgtttgaagagatt
gaaacttatgagaggaggagcggcactcgctcccgggggaccccaaatgagaaaccagct
cgctatcggcatgatgagaacatcttggaatcggagcccatagtctacagaaggattgtc
gtaccccagaacgctaacaaagaattctgcacggactccgggctggtcgttccaagcgtg
tcttacgagcttcacaaaaagctgctctcggttgctgagaagcacgggctgactctggag
cggaggctggagatgacgggagtctgcgccagtcagatggccctgagcctccttggggga
cccaacaggctgaacccaaagaatgtgcatcagcggcccacagtagccctgctgtgtggc
ccccacgtgaagggggcccaggggatcagctgcggccgacacctctccaaccacgacgtc
catgtcatccttttcctgcccaacttcgtcaagatgctggaatccatcaccaacgagctg
aaccttttcagcaagacgcaaggccagcaggtgtccagcgtcagagatctcccagatacc
cccgttgacctagtgatcaactgcctggattgtcatgaaaatgcctttttgagagatcag
ccttggtacaaagcagttgtggactgggccaaccagaaccgggcacccgtcctcagcata
gaccctccgataaatgaaatggagcagggcattgatgccaagtggtcgctggccttgggc
ctgcccctgcccctgggtgagagggccgggcgtgtgtacctctgtgacattggcattccc
cagaaggtctttcaagaagtgggaataaactaccactcgcccttcggctgcaaatttgtc
atccccctgcactccacttag
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