Rissa tridactyla (black-legged kittiwake): 128914624
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Entry
128914624 CDS
T09443
Symbol
SIN3A
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128914624 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtd03036
]
128914624 (SIN3A)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
128914624 (SIN3A)
REST complex
128914624 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
128914624 (SIN3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
128914624
NCBI-ProteinID:
XP_054069838
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All DBs
Position
9:complement(24426493..24460752)
Genome browser
AA seq
1274 aa
AA seq
DB search
MKRRLDEQESAVYASQQRRITSSTEAFQHQHRVLAPAPPVYEAVSETMQSATGIQYSVTP
SYQVSAVPQSSGSHGPAIAAVHSGHHHTAPVQPHGSQVVQSHAHPTPPAVPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGLQPQPQPQAQHQSQPSAQSTPTPAQ
PAPQPPPAKISKPSQLQAHTPASQQTPPIPPYASPRSPPVQPHTPVTISLGTTPSLQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVESVRNDHGGTVKKPQLNNKQQRP
NQNGCQIRRHSGTGATPPVKKKPKLLGLKDQSLAEASKHGVGTESLFFEKVRKALRSTEA
YENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFTWFKNFLGYKESVHIETYPKERAT
EGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVS
SKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGG
TSEVIHRKALQRIYADKAADIIDGLRKNPSVAVPIVLKRLKMKEEEWREAQRGFNKVWRE
QNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQASEDNAGVPTGPHLSL
AYEDKQILEDAASLIIHHVKRQTGIQKEDKYKIKQIMYHFIPDLLFAQRGELSDVEEEEE
EEMDVDEATGAAKKHNGVGGSPPKTKLMFNNTTAQKLRGMDEVYNLFYVNSNWYIFMRLH
QILCLRLLRICTQAERQIEEETREREWEREVLGIKRDKSDSPAIQLRLKEPMDIDVEDYY
PAFLDMVRNLLDGNMDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQ
VTDLYLSENNNGATGGLLASQSSRTLLEAAYQRKAEQLMSEENCFKLMFIQSRGQVQLTI
ELLDTEEENSDDPVEAERWSDYVERYVNSDSTSPELREHLAQKPVFLPRNLRRIRKCQRG
REQQEKEGKEGNSKKSMENVESLDKLECKFKLNSYKMVYVIKSEDYMYRRTALLRAQQSH
ERVSKRLHQRFQAWVDKWTKEHVPREMAAETNKWLMGEGLEGLVPCTTTCDTETLHFVSI
NKYRVKYGTIFKTP
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgattggatgagcaggagtcagccgtgtatgcgtcgcagcagaggcgtatc
accagcagcactgaagcttttcaacaccagcaccgtgtgcttgccccagcacctccagta
tatgaggcggtttcggagaccatgcagtctgccacgggcatccagtactccgtaactccc
agctaccaggtgtcggccgtgccacagagctcgggcagccatgggccagccatcgcggct
gtccacagcggccaccaccacactgcgccggtgcagccccatgggagccaggtggtgcag
agccatgctcaccccaccccgccggccgtgcctgtgcagggacagcagcagttccagagg
ctcaaggtggaggatgcattgtcttatcttgaccaggtgaagctgcagtttggtagccag
ccacaggtctacaatgacttcttggatattatgaaagaatttaaatctcaaagtattgac
actccaggagtgatcagccgtgtatcgcagctcttcaagggccacccagacttgatcatg
ggtttcaacaccttcttgccgcctggttacaagatagaggtgcagacgaatgatatggtg
aacgtgacaacaccagggcaggttcaccagatccccactcacggcttgcagccccagccg
cagccccaggcacagcatcagtcgcagccttcagcgcaatcaaccccaacaccagcacag
ccagcaccacagccaccgccggccaaaatcagtaagccatcacagttgcaggcacatact
cctgccagccagcaaactcccccgattccaccatatgcatcgccacgctcaccgccggtt
caacctcatacgcctgtgacaatctctctgggaaccacaccatccctgcagaacaatcag
cccgtcgaatttaatcatgccatcaactatgtcaacaagataaagaatcggttccaggga
cagccagacatctacaaagccttcctggagatcctccatacatatcagaaagagcagcgt
aatgccaaggaggcaggaggtaactacacgccagctttgacggagcaggaggtgtacgcg
caggtggctcgcctcttcaagaaccaggaggatctgctctcggagtttgggcagttcctg
cccgatgccaacagctctgtgctgttaagtaagacaactgcagagaaagtggaatcggta
agaaatgatcacggtggcacggtgaagaagccacagctcaacaacaaacagcaaagaccc
aaccagaatggctgtcagatccgacggcactcaggaactggagcaacccctccggtgaag
aagaaaccaaagctgcttggtttaaaagaccagtctttggcggaagccagcaaacatggt
gtggggacagaatctctcttctttgagaaggtccgcaaagctctgcgtagcacagaagcg
tatgaaaacttccttcgctgcctggttattttcaaccaggaggtgatctcccgggctgag
ctcgtgcagctcgtttctccattcctggggaaattcccagaattgttcacttggtttaaa
aactttctggggtataaagagtctgttcacatcgagacgtatccaaaggaacgggccacc
gaggggattgccatggagatagactatgcctcttgtaaaagactgggctccagctatcga
gccttacccaagagctaccagcaacccaagtgcacggggcggactccactgtgtaaagag
gttttaaatgacacctgggtgtccttcccatcctggtccgaagactccacatttgtgagc
tccaagaagacacaatatgaagagcacatctacaggtgtgaggatgagcgtttcgagctg
gatgttgtcttggagaccaacctggcaacgatccgcgtccttgaggcaatccaaaagaaa
ctctcgcgcttgtctgccgaggagcaggccaaattccggctggacaacactctgggtggc
acttcggaggtgatccaccgcaaggctctccagaggatatatgctgacaaagcagccgac
atcattgatggacttcgaaagaacccatctgtggctgttcccattgtactgaaaaggtta
aagatgaaagaggaagagtggcgagaagcccagagaggatttaataaagtctggcgagag
cagaatgagaagtattacctgaaatccttggaccaccagggcatcaacttcaagcagaat
gataccaaggtcctgaggtcaaagagtctcctcaatgagattgaaagcatctatgatgag
aggcaagagcaggcttcagaagacaatgctggagtccccacaggcccacacctatcacta
gcctatgaagacaagcagatcctggaagacgctgcctctctcatcatccaccatgtgaag
cggcagacgggaatccagaaagaggacaagtacaaaatcaagcagatcatgtatcacttc
attccagacctgctgtttgctcagcgaggtgaactctcggatgtggaagaggaggaagag
gaggaaatggatgtggatgaagcaactggggctgcaaaaaagcacaatggtgttgggggc
agtcctcctaaaaccaagctgatgttcaacaacacgacagcccagaagctgcggggcatg
gatgaggtctacaatctcttctacgtgaacagcaactggtacatattcatgcggctgcat
cagatcctgtgcttgcggctgctgaggatctgcacccaggccgagcggcagatcgaagag
gagacacgggaaagggagtgggagagggaagtgctgggcataaagcgagacaagagcgac
agtcctgccatccagctgcgactgaaggagcctatggacattgatgttgaggattattac
ccagccttcctggacatggtgcgcaatctcctggatgggaacatggactcatcacagtac
gaggactccttgcgcgaaatgttcaccattcacgcctatatcgcctttaccatggacaag
ctgatccagagcattgttcgacagctccagcacatcgtgagcgatgagatctgcgtgcag
gtaacagacctctacctgtcggagaacaacaatggagcaacaggaggtcttctcgcttcc
cagtcttctcgtacgcttctggaggccgcctaccagcgcaaagctgagcagctcatgtca
gaggagaactgtttcaagctgatgttcattcagagcagaggtcaagttcagttaaccatt
gaactgctggacacagaagaggagaactcggatgaccctgtagaagcagagcgctggtca
gactacgtggagcggtacgtcaactccgattctacctcccctgagctccgggagcacctg
gcccagaaaccggtcttcctgccgaggaatctgcgacggatccgtaagtgtcagcgtggt
cgggagcagcaggagaaggaagggaaggagggaaacagtaagaagtccatggagaacgtg
gagagcctggacaagctggagtgtaaattcaaactgaactcctacaagatggtgtatgtg
atcaaatcagaggattacatgtacaggaggacagctctgctgcgagcccagcagtcccat
gaaagagtgagcaagcggctgcaccagcggttccaggcctgggtggacaaatggaccaag
gagcatgtgccccgcgaaatggcagccgagacaaacaagtggctaatgggtgaagggttg
gagggcttggtgccctgcaccaccacctgtgacacagagacattgcactttgtcagcatt
aacaagtaccgcgtcaaatatggcacgatattcaagacaccgtaa
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