Rissa tridactyla (black-legged kittiwake): 128914677
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Entry
128914677 CDS
T09443
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128914677 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtd03000
]
128914677 (ATRX)
03036 Chromosome and associated proteins [BR:
rtd03036
]
128914677 (ATRX)
Transcription factors [BR:
rtd03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
128914677 (ATRX)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
128914677 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
128914677
NCBI-ProteinID:
XP_054070029
LinkDB
All DBs
Position
9:complement(34697199..34781921)
Genome browser
AA seq
2424 aa
AA seq
DB search
MTAEPVSESKLNTLVQKLHDFLAHSSEESEDANSPPALSKNKTIGKSREPKSSLASMENN
REEGSSSSERTKSLGSSRSKRKPTVVTKYVGSDDEQILDETVNEDISNENSENDVDMKSL
PKGTVVVQPEPVLNEDKDDFKGPEFRSRNTVKMKPEAPKKRGEEGLHGIVSCTACGQQVN
HFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAF
CKKCILRNLGRKELSTILDENNQWHCYICHPEPLLDLVTACDSVFENLEQLLQQNKKKIK
VDSEKSKIYDHTVKFSPKRNNSNCNGEEKKLDDSYSGSLTYSYKALMVPKDLLKKTKKLV
ETTANLNSSFVSFLKNVTENVEINPTVQLCQLKAFKSVLSDMKKAHLALEEGLNLEIQAL
NVKNKEKNTKEKKTDVRSEKNEVKKDEGKEHVALKEDDTVKTQKKAVSERPESEPMDQSV
PTMEQTDKKCTSGEDKRSGRNEEPQYKPNSTEALDMDIVSIPSSVPEDIFETLESAMEIQ
ITSDETDNGNPGTDHETLNSNTKLNTLMKDTKGGTKLKSSAKGTKELIVKLTPVSLSRST
VKAGDQEGNLEKGSKDADVVPRAEKCDSVKQNHNAGSELSTENETVSLAEESDLRRSPRV
KTTPLRRQADISPLTSNSEEDSNDTCNEKCKRKSSRQTRRKNDKRNSSNSIVDGPSPNKL
SKSKKPYVLDNSSDSEEMPAVLKEVAMMSRSSSDIDSNSEALTNDQKTLNFLKNSPVKDE
NGKRKRKSSSSGSDLDAKRGKSAKNSTTAKKKRQNYSDSSNYDSELEKEIKILSKIESAK
RAKKKCSRKDDSYDSSEEEQRKKVSSKRKKDLRKQRDKSSEDDDAEKPSPEKEINHSSKD
KKIGKGSAAKERTNRDLKEKTVKGKHNESSDVEKSSLEKEENCPKGEKLTEVKKGKDLKK
KKVQEDSSSESTEKSAKKEHDFDSSKDRFKDKKGSENKTKKSEKPKKKSYKKEQEDSSSD
VEKLPPEKGSSNSSENDKTKNEPVLQEKQRRNLRERVSKRVQLDLPSDAEKSPLKEESFS
KDAVRSQKQTETKEKKKISHKKKMSKKEQNDSLSSSDEESYEDSKKKIKRGSLKESKKGN
LKKKVVSTSSSSSDKEENYEQNSTGDGSSDEQKIMPVTENLMLSAGTGFCQSSGDEGETK
SRAVPMEEEEDDDDDDPENRIAKKMLLEEIKANLSSDEDASSDDESDEGKKKTGKQNENT
GDDEENEKEDNSESDSEEEESKKPRYRHRLLRHKLTVSDGESGEEKKVKPKEKKEGKRRS
RRKVSSDDSNDSEFHESAVSEEVSESEDDQRPRTRSAKKAEVEENQRSYKQKKKRRRIKV
QEDSSSENNNKSNSEDEDNDDSKSPGKGRKKIRKIIKDDKLRTETQNALKEEEERRKRIA
EREREREKLREVIEIEDASPLKCPITTKLVLDEDEETKEPLVQVHRSIVTRLKPHQVDGV
QFMWDCCCESVKKTKTSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFRTALVVCPL
NTALNWLNEFEKWQEGLEDDEKLEVCELATVKRPQERSYMLQHWQDEGGVMIIGYEMYRN
LAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTG
TPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTLVDVRVMKKRAHILY
EMLAGCVQRKDYTALTKFLPPKYEYVLEVRMTPIQCKLYQYYLDHLTGVGSGNEGGRGKA
GAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSLDEFIASDSDETSMSLSSDDCA
KKKKSKGKKVKKGCSSSGSGSDNDVEVIKVWNSRSRGGGEGNAEELVNNPPSVTKSDEGK
ATSSSNPGSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEELGDKVLVFSQSLISL
DLIEDFLELANREKTDKDKPPIYKGEGKWFRNIDYYRLDGSTTAQSRKKWAEEFNDETNV
RGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQNKPVFVYRFLAQ
GTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRDT
PMLPKDTILAELLQINKEYIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGLTMR
FNMPAGTNMLPTNFNSQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEATNSVTAARIQ
PLEDIISTIWKENVTLTESQVQALALSRQASQELDVKRREAIYNDVLTKQQMLISCVQRI
LMNRRLQQQYNQQQQQQMSYQQAAMSHLMMPKPPNLIMNPSNYQQIDMRGMYQSVSGGMQ
PPPLQRAPPPMRGKNPGPSQGKSM
NT seq
7275 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagagcccgtgagtgaaagcaagttgaatacactagtgcagaaacttcatgac
ttcttggctcactcatcggaagaatctgaggacgcaaactctcctccagcattatctaaa
aacaaaactataggtaagagtagagaacctaaaagtagtctggcttcaatggagaacaat
agagaagagggcagtagttcttcagaaagaaccaaatccttaggatcgtcacgttcaaaa
aggaaacctacagttgtaacaaaatatgttggatcagatgatgaacaaatcttagatgaa
actgtaaatgaagatatttcaaatgaaaactcagaaaatgatgttgatatgaaaagcttg
cctaaaggtacagtggttgtacagcctgagccagtgctgaatgaagacaaagatgatttt
aaagggcctgaatttagaagcagaaataccgttaaaatgaaacctgaagctcccaaaaag
cgtggagaggaaggactacatggaattgtaagctgtacagcttgtgggcaacaggtgaac
cattttcaaaaggattcgatctatagacatcctacactgaaagttcttatttgtaagact
tgttacaagtattacatgagcgatgacattagccgtgattcagatgggatggatgaacag
tgtaggtggtgtgctgaaggtggaaacttgatttgctgtgacttttgccataacgccttc
tgtaaaaagtgcattttgcgcaacctgggtcgaaaggagctatcgactatactggatgaa
aataaccagtggcactgctatatttgccatccagagcctttgttggacttggtcactgca
tgtgacagtgtctttgaaaatttagaacagttactacaacaaaacaaaaaaaagataaaa
gttgacagtgaaaaaagtaaaatatatgaccatacagtcaagttttctccaaagagaaat
aattcaaattgtaatggtgaagaaaaaaaactagatgattcatattcaggttcactaaca
tattcttataaagccctaatggtgccaaaagacttgcttaagaaaacaaaaaagctggtt
gaaactacagcgaatctgaattctagctttgtaagctttttgaaaaatgttacagaaaat
gtagaaataaacccaactgtgcaactttgtcagttaaaagcttttaaatctgtgttgagt
gacatgaaaaaagctcatctagcactagaagaaggtctgaacctggagattcaagctttg
aatgttaaaaacaaagagaaaaataccaaagagaaaaaaactgatgttagatcagaaaaa
aatgaggtgaaaaaagatgaaggaaaggaacatgtggcattaaaagaggatgacactgta
aagacacagaaaaaagctgtatcagaacggcctgagagcgagcccatggatcaaagtgtt
ccaacaatggagcaaacagataagaagtgtacttctggtgaagataaaaggtctggcaga
aacgaagagcctcagtataaacctaatagtacagaggctttagacatggatatagtgtcc
attccctcatctgttcctgaagatatttttgagactctagaatctgctatggagattcag
attacatcagatgagacagacaatggaaatccaggaacagatcacgagactttaaattcc
aatacaaaattgaacactcttatgaaagataccaaaggtggtactaagttaaagtcatcg
gctaaaggaacaaaagagttgattgtaaaattgactcctgtttccctttcacggtcaaca
gttaaagctggagatcaagaaggcaatctagagaagggaagtaaggatgctgatgtagta
cctagagcagaaaaatgtgattctgtaaaacaaaatcataatgctggcagtgaactttcc
acggagaacgaaactgtctcacttgcagaggagtctgatctcaggagatcaccacgtgtg
aagaccacacctctaaggcgccaagcagacatcagtcctttaacatcaaattcagaagaa
gacagcaatgacacatgtaatgaaaaatgtaagaggaaatcatcaagacagacaaggagg
aagaatgataaaagaaattcatctaacagtattgttgatggtcctagccctaataaactt
tctaaatcaaaaaagccatatgtattagataatagctcagattctgaagaaatgccggct
gttcttaaagaagtagctatgatgagtcgcagttcttcagatattgatagtaatagtgaa
gcactaacaaatgatcagaagactttaaattttctaaagaattcaccagtaaaggatgaa
aatggaaaacgaaaaaggaaaagttccagttctggctcagatttagatgctaaaagaggc
aaatcagctaaaaattccactactgctaaaaagaaacgacaaaactattcagattcttca
aactatgattctgagttagaaaaagaaataaaaattctgagtaaaattgagtctgcaaaa
agagcgaagaaaaaatgctcacgaaaagatgatagttatgattcttctgaagaagagcag
aggaaaaaagtaagcagtaagagaaagaaagatttgaggaaacaaagagataaatcttct
gaagatgatgatgctgaaaagccttccccagagaaggagattaatcattcttctaaagat
aaaaaaattggtaaggggtcagctgctaaggaaaggacaaacagagacttaaaagaaaaa
acagtaaagggaaagcacaatgagtcttctgatgttgagaagtcttcactggagaaagag
gagaattgtcctaaaggtgaaaagctaactgaagttaagaagggcaaggatttgaaaaag
aaaaaggtacaggaagattcttcgtcagagagtactgagaaatctgcaaagaaagagcat
gattttgattcttcaaaagacagattcaaggataaaaaaggatcagaaaacaaaacaaag
aaatctgaaaaaccgaaaaagaaaagttacaagaaagaacaagaagattcctcttctgat
gttgaaaagttacctccagagaaaggaagtagcaattcttctgaaaatgacaaaactaaa
aatgaaccagtgcttcaagaaaagcaaaggaggaatttgagagagagagtatctaaaaga
gtacagcttgatttaccctctgatgctgagaaatctcccctaaaagaggagagtttttct
aaagatgctgtgcggagtcaaaaacaaactgaaactaaagaaaagaaaaaaataagtcac
aaaaagaaaatgtccaagaaagaacagaacgactcattgtcctcttctgatgaggagtct
tatgaagacagtaagaagaagattaaaagaggatcattgaaagaaagtaagaagggtaac
ttaaaaaagaaggtggtttccacttcctcttcctcatctgataaggaagaaaattatgaa
cagaattcaacaggtgatggaagcagcgatgagcagaaaattatgccggtgaccgaaaac
ttaatgctgtctgctggtacaggattttgtcagtcatcaggagatgagggagagactaaa
tcaagggctgttccaatggaggaggaggaagatgatgatgatgacgatcctgagaataga
attgccaagaaaatgcttttagaagaaatcaaagccaatctttcctctgatgaggatgca
tcttcagatgatgaatcggatgaaggaaaaaagaaaactggaaagcaaaatgaaaacacg
ggagatgatgaagaaaatgaaaaggaagataattctgaatcggattcagaggaagaagaa
tcaaagaagcctagatacagacacagactgctgaggcacaagctgacagtgagtgacgga
gaatctggtgaagaaaaaaaggtgaaaccaaaagagaaaaaagaaggcaagcgcagaagt
agaaggaaagtgagcagcgatgattcaaatgactctgagtttcatgaatctgcagttagt
gaagaagtcagtgaatctgaagatgaccagcgtccaagaacaagatctgccaagaaagcc
gaggtggaagaaaaccagcgcagttacaaacagaaaaagaaacgaaggcgtataaaggtt
caagaggattcttcaagtgagaacaacaataagagtaattctgaggacgaggacaatgat
gattcaaaatctcctggaaaaggcaggaagaaaataaggaagattattaaagatgataag
cttagaacagaaacacaaaatgcacttaaagaagaagaagaaagaagaaaacgtatagca
gaaagagaacgggagagagagaaattgagagaggtgatagagatagaagatgcttcacct
ctgaagtgccccattacaactaagctggttttagatgaagatgaagaaaccaaagaacca
ttagtgcaggttcacaggagtatcgttaccagactgaaaccacaccaagtagatggtgtt
cagttcatgtgggattgctgttgtgaatctgtaaaaaaaacaaagacatctcctggttct
ggatgcattcttgctcactgtatgggtctggggaaaacgttacaggtagtaagttttctt
cacacagtcttgctgtgtgacaagctggattttcggacagctctggtggtgtgtccgctg
aacactgccttgaactggttgaatgagtttgaaaaatggcaagaaggtttagaagatgat
gaaaaactagaggtctgtgaactagcaactgtgaaacgccctcaagagagaagctatatg
ctccaacattggcaagatgaaggaggtgtgatgataataggatatgagatgtaccgtaat
cttgcacagggcaggaatgtgaagagcagaaaacttaaagaaatatttaataaagcttta
gtcgatccaggtcctgacttcgttgtttgtgatgaaggacacatattaaaaaatgaagca
tctgctgtttctaaggcaatgaattctattcgatccaggagaagaataattcttacagga
acaccactgcaaaataatcttatagaatatcactgcatggttaacttcattaaggagaat
ttgcttggttcaattaaggaattccgaaatcgatttataaatccaattcagaacggtcag
tgcgcagactctactctggtagatgtcagagtaatgaagaagcgcgcacatattctctat
gagatgctagctggatgtgttcagaggaaagattacacagcattaacaaagttcctccca
ccaaaatacgagtatgttctagaagttcgaatgacccctattcagtgcaagctctaccaa
tactacttggatcatttgacaggtgtaggtagtggcaatgaaggtggaagaggcaaagct
ggagctaaactattccaggatttccagatgttgagcagaatctggactcacccttggtgt
ttgcagctggactatattagcaaagaaaataagggctattttgatgaagacagtctggat
gagttcatagcttcggattccgatgaaacttcaatgagcttaagttctgatgattgtgca
aagaaaaaaaaatccaaggggaaaaaagtgaagaaagggtgtagctcaagtggaagtggc
agtgataacgatgttgaagtcattaaagtctggaattcaagatctcgtggaggtggagaa
ggaaatgcagaagaacttgtaaacaaccctccatctgttacaaaatcagatgaaggtaaa
gctacatcttcttccaatcctggtagcccagcgccagattggtacaaagactttgtcact
gatgcagatgctgaagtgttggaacattctgggaaaatggtgcttctctttgaaattctt
cgaatggcagaggagcttggagacaaagtcctagtgtttagccagtccctaatatctctg
gatttgatagaagattttctggagctggccaacagggagaaaactgacaaagacaagcct
cctatttataaaggtgaaggaaaatggtttagaaacattgattactatcgcttagatggt
tcaactacagctcagtcaagaaagaaatgggctgaagaatttaatgatgaaactaatgtg
agaggccgcttgtttattatatccactaaagcaggttccctcggaattaatctcgtggct
gctaatagagtaatcatctttgatgcttcttggaacccatcgtatgacatacagagtatt
ttcagggtttaccgctttgggcagaacaaacctgtgtttgtgtacaggtttttggctcag
ggaacgatggaagataagatctacgatcgtcaggtaacaaagcagtcactgtctttccgg
gttgtcgaccaacagcaagttgaacgtcattttactatgaatgaacttaccgagttgtac
acttttgagccagatttgttggatgatcctaattcagaaaagaaaaagaagagagataca
ccaatgttgccaaaagatacaattctagcagaattgcttcaaattaataaagagtatata
gttggatatcacgaacatgattcactcctggaccataaggaggaagaagaactcactgaa
gaagaaaggaaggcagcatgggcagaatatgaagcagaaaagaagggcttgactatgcgt
ttcaacatgccagctgggaccaatatgcttcccacaaatttcaactctcaaacaccatat
attcctttcaatttgggcgctctgtcagcaatgagtaatcaacagctggaggaccttatt
aatcaaggaagagagaaagttgtggaagcaaccaacagtgtaactgcagcaagaattcag
ccccttgaagacatcatttcaaccatatggaaagaaaacgtgacactcacggagagccaa
gtacaggccctggcactaagcaggcaggcgagccaggagcttgatgtcaagcgccgagaa
gccatctataacgatgtccttactaaacaacagatgttaatcagttgtgttcagaggata
ctgatgaacagaagactacagcagcagtacaatcagcagcaacagcagcagatgtcgtac
cagcaagcagcaatgagtcatctcatgatgccaaagcctccaaatttaatcatgaatcct
tccaactaccaacagatagatatgagaggaatgtatcagtcagtgtctggtggtatgcag
ccaccgccgttacaacgagcaccacccccaatgagaggcaaaaatccagggccttcccaa
gggaaatcaatgtga
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integrated database retrieval system
