Rissa tridactyla (black-legged kittiwake): 128914684
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Entry
128914684 CDS
T09443
Symbol
AFF2
Name
(RefSeq) AF4/FMR2 family member 2 isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtd03021
]
128914684 (AFF2)
Transcription machinery [BR:
rtd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
128914684 (AFF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
128914684
NCBI-ProteinID:
XP_054070049
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All DBs
Position
9:complement(40783958..41131548)
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AA seq
1268 aa
AA seq
DB search
MDLFDFFRDWDLEQQCHYEQDRSALKRKEWERRNQEVQQDEDLFASGFNLFGEPYKTNKG
DALANRVQNTLGNYDEMKDLLTNHSNQSHLVGIPKNSVPQTPIDKNEQNFFPEPRNRMIP
SHQISGHSSTSMPPPSSLSSNSTLLHSHQSSRKSRTDWSRGGHNSSGAQPSQSSSQQSRT
KHGSSHDQPQSRYEDLYNCQSEQHKSGGTEEANSVAASSHSRRHTHSKSAAGEHTYKENS
HSKSPTELEFVGHGPGSPLPSTSLLSANNGLSTQNFPPGLHCKNSMVQQKPTAYVRPMDG
QDQVPNDSPELKPPIEIESGYGNQSFGTLLEGKVNTPSSKNKVPKLNIPPVTEVTLPNDS
SCVEEILREMTHSWPPPLTAIHTPGKAEQTKFSIPSKDSQHLTSGYNVQKWSDPAGKVAT
KSVPQKSMLEDDLKLSSDEDDNEQAAEKTKLRNIPVNSLTVPAAHATGLAHSSGGSGSSS
ESESSSESDSDSESSSSDSECNEESRSATPEPEPPSTNKWQLDKWLNKVNPHNKTIINNQ
NEPHNETSSQAQSNQQAEGPNKGKLNSSLPPTDSKDRAILSPIREKAKPRVAQKTPEAKS
SKQKSPAHNEPTSQRTTGKKQPKKVERTSSVEEYNWPKPNNTSNTPKEKDTQEPPEQPKV
RTKAAVGKTAPRKEPRTSTGLTSEKKKYRGPSKIVPKSREFIETDSSTSDSNTDQEESLQ
AKVLPACTGSGNGVKVKDSGSNILSVSSLTSNGSNTSIDQTSNDLEEQLFSPIPIVQNEL
LSPLREYEELKSLWVKIDLSLLSRIPGQEPFETTSVKSESREANVKHRRPSRESPTPAAE
KPSTKSKRKHKQTESLDTFVESKKQRLEDPSASCLLPPCISPIPNHRLTSTKESSGSSVK
KVAKKREEKLFPPPLSPLLDEPVHRRHSSDNSSFSQETNITNTSQTSSSSSSVSKHRKNE
NKSSSNPKGICEEESHNTPTANSLLDTSHLETDIWSAMPTLSNGNSEPRRPKITFDDVLH
NADYYMQEAKKLKHKADALLEKFGKAVNYADAALSFIECGNAMERDPLEAKSPYTMYSET
VELIRYAMRLKNFTGSSATEGDKKLAVLCYRCLSLLYLRMFKLKKDHAMKYSRSLMEYFK
NSSKASQAPSPWGGNGKSTETPSPMSLSPSPVSSAGSSAGTTGSSLAGTITIPQRIHHMA
ASHVNITNNVLRSYEHWDMADKLTKENKEFFVDLDSVMGPLTQHSSMTNLVRYVRQGLHW
LRIEAHLL
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggacctattcgactttttcagggactgggacttagagcagcagtgtcactatgagcaa
gaccggagtgcacttaagcggaaagaatgggagagaagaaaccaggaagtccagcaagat
gaagatctctttgcttcaggttttaacctctttggggaaccctacaagacaaataaaggc
gatgcccttgcaaaccgtgtccagaacacattgggaaattatgatgagatgaaggacctg
ttgaccaaccattccaaccagagccaccttgtaggaatcccaaagaattctgtcccacag
acacccattgacaaaaatgaacagaactttttcccagagccaagaaacaggatgatccca
tctcatcagatcagtggccactcatcgacatcaatgcctccaccttcttcattgtcatct
aattctactttgctacacagtcaccagagcagcaggaagtcaaggacagactggtcacgt
ggtggtcacaactctagtggggcccagccaagccaatccagtagtcagcagagtcggaca
aaacatggctcttctcatgaccagccacagagcaggtatgaagacctctataattgtcag
agtgagcagcataaaagtggaggaactgaggaagcaaattctgtggcagcatcttcacat
tcaaggaggcatactcattcaaagtcagcagctggagaacatacttacaaagaaaatagt
cattcgaagtcacccacagagcttgagtttgtaggtcatggtcctggatctccacttcct
tccacatctttgctatctgcgaacaatggtctttcaacccagaatttcccaccaggactt
cactgtaaaaacagcatggtccagcaaaagcctacagcgtatgtcaggcctatggacggt
caggaccaggtacccaatgactcacctgaactgaaacctccgatagaaattgagagtgga
tatggaaatcagtcctttggaacactgctggaaggaaaagtgaacacacctagttcgaag
aacaaagtaccaaagctcaacattcctcctgttactgaagttacccttcccaatgactcc
agctgtgtggaagaaatattgcgggagatgacccattcctggcctcctcctcttactgct
attcacactcctggcaaggctgagcagaccaagttttctatcccaagcaaggactcccaa
catctgacctcaggatacaatgtacaaaagtggagtgatccagcagggaaagttgcaaca
aagtcagtgccacaaaagtcaatgcttgaggatgatctgaaactcagcagtgatgaagat
gacaatgaacaggctgctgaaaagacaaaattgagaaacattcctgtaaacagcctgacg
gtgccagcggcacacgcaaccggcttggcccattccagcggcggctccgggagttccagt
gagtccgagagcagctctgagtccgactccgacagcgagagcagctccagtgacagcgag
tgcaacgaggagtcacgcagtgccacgccggagcctgaacctccctcaacaaacaaatgg
cagctggataaatggctaaataaagtgaacccccacaacaagaccatcatcaacaatcaa
aatgagcctcacaacgagaccagctcccaggcccagagcaaccagcaggccgaagggcca
aacaaagggaagctcaacagcagcctgcccccgaccgattccaaagacagggcaatcctt
agtcccatccgagagaaagccaaaccgcgggttgcccagaaaaccccagaggcaaaaagc
tccaagcagaagtcaccagctcataatgagccaacttcacaaaggactactgggaaaaag
caacccaaaaaggtagaaaggacttccagtgtagaagagtataactggcccaaaccaaat
aataccagcaacactcccaaagaaaaagacacacaggaaccccccgagcagccaaaggtt
cgaactaaagcagcagttgggaagaccgctccaaggaaagaaccgcgaactagcacaggt
ctcacttcggagaagaaaaagtacagaggccccagcaaaattgttcctaagtcccgggaa
ttcattgaaacggattcatctacttctgactcaaatacagaccaggaggagagcttgcag
gcaaaggtattgccagcttgcactggctctggcaatggcgtcaaagtgaaggactctggc
agtaacatcctcagcgtaagtagtttaactagcaatggcagcaacacatccattgaccag
accagcaatgacttggaggagcagctcttttctcctatcccaatcgtacaaaatgaactt
ctgtccccactgagagaatatgaagaactcaaatctctgtgggtgaaaatagaccttagt
ttactctctaggatacctggacaagagccttttgagaccacgtctgtgaaaagtgaatca
agagaggcaaatgtgaaacacagacgaccatctcgagagtcccctaccccagcagctgaa
aaaccatccacaaagtccaaaaggaaacacaagcagacagaaagcctggatacctttgtt
gaaagcaagaagcagcgcctggaggacccttcagcttcatgcctgctcccaccttgtatc
tctccgataccgaatcacagattaaccagcactaaagagagcagcggtagctcagtgaag
aaggtggcaaagaaaagagaagagaagctgttccctcctccgttatcccccctcttggat
gagcctgtgcaccggcggcacagcagtgacaacagctccttcagccaagagaccaacatc
acaaacacctctcagaccagcagctcttcctcctctgtttctaaacacagaaagaatgaa
aataaatcctcttctaaccccaaaggcatctgtgaggaagaatctcacaatacaccaacg
gccaacagtcttcttgacaccagccatctagaaacagacatctggtctgcaatgccaacg
ctttccaatgggaattctgagcccagaagacccaaaataacatttgatgacgtgcttcac
aatgcggattattacatgcaagaggctaagaagctgaagcataaagcagatgcattgctg
gagaagtttggcaaagcagtgaattatgctgatgctgccctctccttcatcgagtgcggg
aacgctatggagcgagatccattagaagctaaatctccgtacaccatgtactcagagact
gtggaactcatcaggtatgcaatgagactcaagaatttcacaggctcttctgccacagaa
ggggacaagaaattagcagttttatgctaccgatgcttatcacttctctacttgagaatg
tttaaactaaagaaggaccatgctatgaagtactccagatctctgatggaatattttaag
aactcttcaaaagcctcgcaggccccctcaccttggggcggcaatggaaagagcacagaa
acaccatcgcccatgtccctgagcccgtcccctgtcagctctgctggaagcagcgcaggt
accaccggctcctccttggcgggaaccatcaccatccctcagcgcatccaccacatggct
gccagccatgtcaacatcaccaacaacgtcctgcggagctacgagcactgggacatggct
gacaagctgactaaggagaacaaagaattctttgttgacctggactcagtgatgggaccc
ttaacacaacacagcagtatgaccaatctggttcgttatgttcgccaaggactccactgg
ctccgcattgaggctcatttgttgtag
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