Rissa tridactyla (black-legged kittiwake): 128914760
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Entry
128914760 CDS
T09443
Symbol
NEDD4
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4 isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04120
Ubiquitin mediated proteolysis
rtd04144
Endocytosis
rtd04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128914760 (NEDD4)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128914760 (NEDD4)
09144 Cellular community - eukaryotes
04530 Tight junction
128914760 (NEDD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128914760 (NEDD4)
04121 Ubiquitin system [BR:
rtd04121
]
128914760 (NEDD4)
03029 Mitochondrial biogenesis [BR:
rtd03029
]
128914760 (NEDD4)
Enzymes [BR:
rtd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
128914760 (NEDD4)
Membrane trafficking [BR:
rtd04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
128914760 (NEDD4)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
HECT type E3
128914760 (NEDD4)
Mitochondrial biogenesis [BR:
rtd03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
128914760 (NEDD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
128914760
NCBI-ProteinID:
XP_054070253
LinkDB
All DBs
Position
9:complement(15518045..15568731)
Genome browser
AA seq
1309 aa
AA seq
DB search
MARQLRLHFAAQRSNTDPLLETSEDVLDSNNCMYFKKLQNSAPNVTQMKLTPRQVVYAPV
MQQGSNQEENPAIASLQIKKTTSLHISLQSRKYSGCFRSGDAVATGEDTSFIGIGNEGNC
GARIVVDHRPNDSLLSNTAPCNGSLSSIAASDSGSFSSAGSDYGSCASTTSDGGSYSNSV
ISDSGSGTLSTSDGTFCSSVHGDSSYRSTANKCNPYRSHSSQETLCRSNTTFDQDALSVR
KKTKIPLRRCSSLVIFPRSPSSTPPASPVSSGQLPCRGAYQTSHKLIISPSELAQKEDQT
ISKGFLSTAVNGLRLSKTVCSSGEVRDIRPLYLNTSLQDKSKILDSSEQATCEEVSDGFS
CISVHLTQRALASSSEMVNGCCSPELNLNSSAKYPHLKLARSTSACLPSKIDSEYQVNIN
ELERPNAQMSKANHVLQRSISLEGSRQKVSCCLSSLKYKCHSARTSQLHIQFKPGNEGKP
TGVKKRYGTSKREMSSTSLWRPHKTRDDFLGQVDIPLYQLPTENPSMERPYTFKDFVLHP
RSHKSRVKGHLRLKMTYLPKSNGSEEESTEQAEELEPGWIILDQPDAASQPQQQQQESPP
LPSGWEERQDILGRTYYVNHEFRRTQWKRPTAQDNVAVADIGSVQLEAQHVFTHRRQISE
DTENLDNRDSPESWEIITEDEATMYSNQNLQIPLSQSNCDIQTHLAEELSTRLTTSGSSA
TGQSAAYTNHSSRRGSLQTYRVEEQPAHPVLLPTSSGLPPGWEERQDEKGRSYYIDHNSR
TTTWIKPVVQIAVEPGPLSAAQSISVGRQPQATSSDSSQQSSQQQPEMEQGFLPKGWEVR
HAPNGRPFFIDHNTKTTTWEDPRLKNSAHPRRKTSLDPVDLGPLPPGWEERTHTDGRIFF
INHNTKKTQWEDPRLQNVAITGPAVPYSRDYKRKYEFFRKKLKKQGDIPNRFEMKIHRTT
ILEDSYRRIIAVKRADFLKARLWIEFDGEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYS
ATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDAFFIRPFYKMMLQKPITL
HDMESVDSEYYNSLRWILENDPTELDLRFIVDEELFGQTHQHELKSGGSEIVVTNKNKRD
YIHLVIQWRFVSRVQKQMAAFKEGFFELIPQDLIKIFDENELELLMCGLGDVDVADWKLH
TKYKNGYNINHQVIQWFWKAVLMMDSEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFT
VEQWGTPEKLPRAHTCFNRLDLPPYDSFEDLWDKLLLAIENTQGFDGVD
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggcacgacagttaagattgcattttgctgcccaaagaagcaacactgatccattattg
gaaacctctgaagatgttttggacagtaacaattgtatgtacttcaagaaattgcaaaat
tctgcacctaatgttacacagatgaaactgactcctagacaagttgtttatgcacctgta
atgcaacaaggaagtaatcaagaggaaaatccagctattgcttcattgcaaataaaaaag
acaacctcactgcacatttccctacagtctagaaagtatagtggatgttttcggtccggt
gacgctgtagctactggtgaagacacttcattcattggtattgggaatgaaggaaattgt
ggcgctagaattgtggttgatcatcgacctaatgatagccttctaagcaatactgctccg
tgcaatggcagtcttagcagtattgcagccagtgacagtggatcgttcagcagtgctggc
agtgactatggatcatgtgcaagtaccacaagtgatggaggttcatatagtaacagtgtc
atcagtgacagtggtagtggcactctttcgacaagtgatggtactttctgtagtagtgta
catggtgattcttcatataggagcactgcaaacaaatgtaatccctacaggagccactcg
tctcaggaaactctgtgtagaagtaatactacttttgaccaagatgctttgtcggtgagg
aagaaaactaaaattccactgcgacgttgttcatcactggttattttccctaggagtcct
tccagtactcctccagcttcaccagtaagctcaggtcaactgccatgtagaggtgcctat
caaacatcccataaactaattatttctccaagtgagctggcacaaaaagaagatcaaacc
atttccaagggattcctttcaacagcagtcaatggacttcgactgtctaagacagtttgc
tcctctggcgaagttagagacattcgaccgctttacttgaacacatcattacaggacaaa
agtaaaattttggatagttccgagcaggcaacttgtgaagaagtatccgatggcttctca
tgtatttcagttcatctcactcaaagagcacttgcatcgagcagtgaaatggttaatggc
tgttgcagtccagagttaaatctgaactccagtgcaaaataccctcatttaaaactggca
cgtagcacatctgcatgtttaccctcaaaaatagattcagaatatcaggttaacataaat
gaactagaaagaccgaatgcacagatgagcaaagccaaccatgttttgcaaagaagtatt
tcgttggaaggatcacgtcaaaaagtttcttgctgtttatccagccttaaatacaagtgt
catagtgcaaggacgtctcagttgcatatacagttcaaacctggaaatgaaggaaaacca
actggtgttaagaaacgatatggaacctccaaaagggaaatgtctagcacttctttgtgg
aggccccataagactcgagatgattttcttgggcaagtggatattcctctttatcagtta
ccgacagaaaatccaagtatggagagaccatatacatttaaggattttgtccttcaccca
agaagccataaatccagagttaaaggccaccttaggttaaaaatgacttacttacctaaa
agcaatgggtctgaagaagaatccacagaacaggctgaagaattggagcctgggtggatt
atattggaccaaccagatgctgctagccagccccaacagcagcagcaggaatctcctccg
ctgccatcaggctgggaagaaaggcaagacatccttggaaggacctactatgtcaatcat
gaattcagaagaacacagtggaaaagaccaactgctcaggacaatgtcgctgttgcagat
attggtagtgtgcagttggaggcccagcatgtgttcactcatcggcgacagatatcggag
gatacagaaaatctagacaacagagattcccctgagagctgggaaattataactgaagat
gaggctacaatgtatagcaatcagaaccttcaaatacctctctcacagagtaattgtgat
atacagactcatcttgcagaagaattgagtactagacttactacctctggaagttcagct
actggccagtcagcagcctacactaaccattccagcagaagaggtagcctgcaaacatac
agagttgaagagcagcctgcacatccagtgttactgcctacttcatctggattaccccca
ggctgggaagaacgacaagatgaaaaagggaggtcatattatatagatcacaattctaga
accactacctggataaagccagttgtacagattgctgtggaaccaggtccgttgtcagct
gcacaaagtatttctgtaggaagacaaccacaagcaacatcaagtgattcatcacaacag
tcttctcagcagcagcctgaaatggagcaaggatttcttcctaaaggctgggaagtccga
catgcacccaatgggagaccattctttattgaccacaataccaaaactacaacatgggaa
gatccaagactgaaaaattccgctcatccaaggagaaagacttccctagatccagtagac
ctggggccattaccaccagggtgggaagagagaactcacacagatggaagaatattcttc
ataaaccacaatacaaagaaaacacaatgggaggatcctcgactgcagaatgtggcaata
actggaccagctgtgccttactccagggactataagcggaagtatgagttcttcagaaag
aaattgaagaaacagggtgatattccaaatagatttgaaatgaaaattcatcgtacaaca
atccttgaagattcttatagaagaattatagctgtaaagagagcagacttccttaaagca
agactttggattgaatttgatggtgaaaaaggtttagactatggaggagtggccagggaa
tggttcttccttctctctaaagaaatgtttaatccttattatggattgttcgaatattcc
gctacagataactatactctgcagatcaatccaaactctggactttgcaatgaagatcat
ctctcttatttcaagtttataggtcgtgtagctggaatggctgtttaccatggcaaactt
ttggatgccttttttattcgtcctttttacaagatgatgctccaaaagccaataacactt
catgatatggagtctgtggatagtgaatattataattctctgagatggattcttgaaaat
gatccaacagaactggacctcagatttatagttgatgaagaactttttggtcagacccat
caacatgaactgaaaagcggtggatcagaaatagttgtcaccaacaagaacaagagagac
tacatccatcttgtaattcagtggagatttgtgagcagagtacagaaacaaatggcagcc
tttaaagagggcttttttgaattaataccacaggatctgatcaaaatttttgatgaaaat
gagctagagttattaatgtgtggactgggagatgtggatgtggctgattggaaactacat
acgaaatacaaaaatggctacaacataaaccatcaagtaatacagtggttctggaaggcg
gtcctaatgatggactctgaaaagagaataagattacttcagtttgttactggcacatca
cgtgtacctatgaatgggtttgctgagctgtatggttcaaatggaccacagttgtttaca
gttgaacagtggggtacccctgaaaaactgccaagagctcatacctgttttaatcgcttg
gatttgcctccgtatgactcgtttgaagatttatgggataaacttcttctagcgattgaa
aatactcagggttttgatggggttgattaa
DBGET
integrated database retrieval system
