Rissa tridactyla (black-legged kittiwake): 128914791
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Entry
128914791 CDS
T09443
Symbol
IGDCC4
Name
(RefSeq) immunoglobulin superfamily DCC subclass member 4 isoform X1
KO
K22657
immunoglobulin superfamily DCC subclass member 4
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtd04515
]
128914791 (IGDCC4)
Cell adhesion molecules [BR:
rtd04515
]
Immunoglobulin superfamily
DCC/UNC5 family
128914791 (IGDCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
V-set
Fn3_VIN3
C2-set_2
Ig_5
Ig_RIMBP2
Interfer-bind
Ig_C17orf99
SusE
Motif
Other DBs
NCBI-GeneID:
128914791
NCBI-ProteinID:
XP_054070343
LinkDB
All DBs
Position
9:3523209..3624268
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AA seq
1296 aa
AA seq
DB search
MPPRRPLLPAPGGAYMALEDLLCLCFSALAVLAVQGRLLEGDSLELSCSAGPAKVILEPN
QGVVLDCNLAPAEQVINITWKKNGFPLVEQEHLHMLPNGSLFISSQAVVKDSKYPEKAGA
EGNYSCVSHSSLGAVTSQTAAVRFSTLSRFFQQPESQTVEENGMARFECRIEGLPSPVIT
WEKDHEAVPAEPRFITLPNGVLQIVDVQESDAGAYHCVATNAARKRYSNDAILSVLKGSQ
PAGRDVTIVAAPENTTVVAGESVVMECMASADPTPFVSWIRQDGKPVSTDVIVLGRTNLL
IPSSQPHHSGVYVCRANKPQTRQFVTAAAELRVLATPSISQAPETISRTRASTARFVCKA
EGEPAPTIHWLKNGEAILSNGRVKVQSSGSLVINQIGLEDAGYYQCVAENSLGMACATAK
LSVIVREGLPSAPKKVSAVSLSSTTVLVSWERPEYNSEQIIGFSLHYQRAVGTDNVEYQF
AVNNDTTELQVKDLEPNTNYVFYVVAYSQLGASRTSSSIIVQTLEDVPSAAPQLSLSSMT
PGDIRVTWLPPPPELSNGKITKYKIDYCTLKEADQVTSIEVGGNETQITLYSLHPNKVYK
VRIAASTSVGYGAPSEWTQHRTPDRDNQTHVPFAPTELKVRAKMESLLITWQPPANHAQI
SGYKLYYRQVGPEESSDESPLDGAEDESWDVGPIKLKKKVKQYELTRLAPGKLYEVKLVA
FNKHEDGYAAVWKGKTEKAPATAVDPPVQKGPPLPPVQVYAESNSSTSIWLRWKKPDFTT
VKIVNYTVRFSPWGLKNASLVTYYTSSDEDILISGLKPYTRYEFAVQSNGVGIDGPFGSV
VERFTLPDRPSTPPSDLRLHPLNPYAVQVHWCPPAEPNGIIVEYLILYNANNTQPDDMWT
LLTREGNIFSTEVHGLESDTRYFFKMGAKTVVGSGPYSNVKDVHTLREKLSDVLDIHSVT
GIIVGVCLGLLCILFCMCASFRNSKQREALPGLDSQAAGNHTYYHRSRQGVAAPRATSDS
HELESLMSPLPEDAPVPLGDVAELTEVHSLIHTSLPEDIVHGKRKSSWNKSANQPWTNSI
ARYGDAITKEPLSAVNGSLKLPSSAGQKLLLQALVYDAVMNEAKKSHPPASLHQVEAEVI
VHSDFSASDRDYDSQLHTLESEETETEDQEPEELPSGELALPGSPSTQQDATQVLVGCTG
DSEVQTQNELLCTDRKTNKTEAICIRGLTNGFHRHGESLDSVESGDSDSIQEARGDVQPG
KCQSLSPAQEEATLCSNSCLTSSSSASENMACVHNH
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgcggcggcccctgctcccggcgcccggcggggcttacatggcgctggaggac
ctgctttgtctctgcttctccgccctcgccgtcctcgccgtgcaagggaggctgctggaa
ggggattctctggagctgagctgtagtgctggtcctgcgaaggtgatattggagccaaac
caaggtgtggttttggactgtaacctggcccctgctgagcaggtgatcaatatcacgtgg
aagaagaatggatttccattagtggagcaggaacatctccacatgcttccaaatggatcg
ctcttcatctcatcccaggctgtggtaaaggacagtaaatatcctgagaaggctggcgct
gagggtaattactcctgcgtgtctcacagctccctaggggctgtcaccagtcaaacggct
gcagtcagattttcaaccttgtcacgctttttccaacagccagagtcacagacagtggaa
gaaaatggtatggcccggttcgagtgtcggattgaaggactgccctcccctgtcatcacg
tgggagaaggaccatgaagctgttccagcagaacccaggtttataactcttccaaatggt
gtcctccaaattgtggatgtgcaggagagtgatgctggggcttaccactgcgtggcaacc
aacgccgcccgaaaacgctacagcaatgatgccatcctcagtgtcttaaaaggttcccag
ccagcaggaagagatgtcaccatcgtcgccgctccggagaacaccacggtggtggctggg
gagagtgtggtgatggagtgcatggcgtctgccgatcccacccccttcgtctcctggata
cgacaggatggaaagcccgtttccacagatgtgattgtgctgggccggacaaatctcctc
attccttccagccagccccatcactcaggggtgtatgtctgccgtgctaacaaaccccag
accaggcagttcgttacagccgcagctgagctccgggtccttgctacacccagcatctcc
caggctcctgaaaccatctctcgcacccgagccagcacggctcggtttgtctgcaaggcg
gagggcgagccagccccaaccattcactggctgaagaacggcgaggccatcctctccaac
gggcgggtgaaggtgcagagcagcggcagccttgtgatcaatcagatcgggttggaggat
gctggctactatcagtgtgtggctgagaacagcttgggcatggcttgtgccactgccaag
ctctcggtgatcgtgcgggagggtttgcccagcgctcccaagaaggtgtcagccgtgtcc
ctctccagcaccacagtccttgtgtcctgggaacggccagagtacaacagcgagcagatc
attggcttctcattacattaccagcgggctgtgggaacagataacgtggaataccagttt
gctgtcaataatgataccactgagctgcaagtcaaggacctagaacccaataccaactat
gtcttctacgtggtcgcgtattctcagctcggagccagccggacatcctcttccattatt
gttcagaccctggaggacgttcctagtgctgcccctcagctgtccctgtcgagcatgact
cctggtgacatccgtgtgacatggctgccgcctcctccagagctcagtaacggcaagata
acgaagtacaagatcgactactgcaccctcaaggaagcagatcaggttacctccattgaa
gtgggtggaaatgagacacaaatcactctttactcgctccatcccaacaaagtatacaaa
gttcgcatcgcagccagcaccagtgtgggctacggggccccttctgagtggactcagcat
cggactcctgacagagacaaccagacacatgttccatttgccccaacagaattaaaagtg
cgagcgaagatggagtctctcctgataacatggcagcccccagccaaccatgcccagata
tctggctacaaactctactaccgacaagtgggcccagaggagtccagcgatgaaagccct
ttggatggtgctgaagatgagagctgggatgtaggccccataaaactaaagaagaaagtg
aagcagtacgagctgactcgactagctcctgggaaactctatgaggtgaagctggtggca
ttcaataagcacgaagatggttatgcagcggtttggaagggcaaaacagaaaaggcacct
gcaacagcagtagatccccctgtgcagaagggtcctccattgcctccagtccaagtctat
gcagagtccaacagctcaacttccatatggctcaggtggaagaaacctgacttcactaca
gtcaagattgtcaactacactgtgcgcttcagcccttggggcctgaaaaatgcctctctc
gttacatactacacaagctcggatgaagacattctcattagtgggttgaagccctacact
aggtatgagtttgccgtgcaatccaatggcgttggcatcgatggacccttcggcagtgtg
gtggaacggttcacgcttcctgaccgtccctcaactcctccatctgacctgcggctgcac
ccgctcaacccctatgctgtccaggtgcactggtgcccccctgctgagcccaacggcatc
attgtggagtacctcatcctgtacaacgccaacaacacgcagcctgatgacatgtggacc
ttgctgacgcgagaaggaaatatcttcagcactgaagtgcatggcctggaaagcgatacc
agatacttcttcaagatgggagcaaagacggtcgtgggatctggtccctattcaaacgtt
aaggatgtgcacaccctccgggagaagttgtctgatgttctggatatccactctgtcacg
ggaatcatcgtgggagtctgcctggggctgctctgcatcctcttctgcatgtgtgccagc
ttccgcaacagcaagcagagggaggctttgccaggcctggattcccaggcagctggcaac
cacacttactaccaccggagcaggcaaggggtggcagctccccgtgccacctcggattcg
catgagctagagtccctcatgtccccgctcccggaggatgcacccgtgcccctgggggac
gtcgcagaactgacggaagtgcacagcctcatccacacaagcctccccgaggacatcgtc
catgggaagaggaagtcttcatggaataaatcagctaaccagccctggacaaacagcata
gccagatacggggacgctatcacaaaagagcctctctctgctgtgaacggatcactgaag
ctcccttccagcgccggacagaagcttttgttacaagctctggtttacgatgccgtgatg
aatgaagcaaagaaaagccatccaccagccagcctccaccaagtggaagcagaggtcatc
gtccattctgatttttcagcctctgacagagactacgactcccagctgcacactctggag
agtgaagagacagaaactgaggaccaggagcctgaagagctcccctccggagagctggct
cttcccggctctcccagcacccagcaggacgctacccaagtgttggtgggctgcacgggc
gattctgaggttcagacccagaacgagctgttgtgtaccgacagaaagactaacaaaaca
gaggccatttgcatccgtgggctcaccaatggcttccacaggcacggggaaagtctggat
tcagtggagagcggagattcggactccatccaggaagccaggggggatgtgcagccaggc
aagtgccaatcgctttccccggcccaggaggaggccaccctctgtagtaactcttgttta
accagttcatcctcagcatctgagaacatggcatgtgtccacaatcattaa
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