Rissa tridactyla (black-legged kittiwake): 128914800
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Entry
128914800 CDS
T09443
Symbol
TPM1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04260
Cardiac muscle contraction
rtd04261
Adrenergic signaling in cardiomyocytes
rtd04814
Motor proteins
rtd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
128914800 (TPM1)
04820 Cytoskeleton in muscle cells
128914800 (TPM1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
128914800 (TPM1)
04261 Adrenergic signaling in cardiomyocytes
128914800 (TPM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtd04812
]
128914800 (TPM1)
04147 Exosome [BR:
rtd04147
]
128914800 (TPM1)
Cytoskeleton proteins [BR:
rtd04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
128914800 (TPM1)
Exosome [BR:
rtd04147
]
Exosomal proteins
Exosomal proteins of microglial cells
128914800 (TPM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
CLZ
Laminin_II
Crescentin
TMF_DNA_bd
DUF745
CENP-F_leu_zip
PUMA_CC
ATG16
Laminin_I
Lebercilin
DUF3450
MscS_porin
GAS
DUF16
DUF4200
DUF1664
Fez1
Motif
Other DBs
NCBI-GeneID:
128914800
NCBI-ProteinID:
XP_054070369
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All DBs
Position
9:19778809..19798883
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AA seq
284 aa
AA seq
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MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKGTEDELDKY
SESLKDAQEKLELADKKATDAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAE
ERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcaagaagaagatgcagatgctgaagctggacaaggagaacgccttggac
agagccgagcaagccgaggcggacaagaaggcagcggaggagagaagcaagcagctggag
gacgagctggtggctctacaaaagaagctgaagggcactgaggatgagctggacaaatac
tccgagtcccttaaagatgcacaggaaaagttggaactggctgacaaaaaggccacagat
gctgagagcgaagtagcttctctgaacagacgcatccagctggttgaggaagagttggat
cgggctcaggagcgcttggctactgccctgcagaagctggaggaggctgagaaggctgca
gatgagagtgaaagaggaatgaaggtcattgaaaatagagcccagaaggatgaagagaag
atggaaatccaagagatccagcttaaagaggctaagcacattgctgaagaggctgaccgc
aagtatgaagaggtggctcgcaagcttgtgatcattgagagtgacctggagcgggctgag
gaacgtgctgaactgtcagaaagcaaatgtgctgagcttgaagaggagttgaaaactgtg
accaacaacctgaagtcgctggaggctcaggctgagaagtactcgcagaaagaagacaaa
tatgaagaggagatcaaagtactgactgacaaactgaaggaggctgagacccgtgctgag
tttgctgagaggtcagtaaccaagctggagaagagcattgatgacctagaagatgagcta
tatgctcagaaactgaagtacaaagccatcagtgaggagctggaccacgctctcaacgat
atgacttccatataa
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