Rissa tridactyla (black-legged kittiwake): 128914821
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Entry
128914821 CDS
T09443
Symbol
DENND4A
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128914821 (DENND4A)
Membrane trafficking [BR:
rtd04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
128914821 (DENND4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_long
PPR_3
PPR
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
128914821
NCBI-ProteinID:
XP_054070414
LinkDB
All DBs
Position
9:3372322..3427591
Genome browser
AA seq
1899 aa
AA seq
DB search
MEDKGARVADYFVVAGLTDISKPLEEEIHFNDACHKIAKPKEPITDVTVINKSLGEEVPQ
GYKCIDVTPSGLSADLNNGSLVGPQIYLCYRRGRDKPPLTDLGVLYDGKERVKQGCEIIQ
TTPYGRPANISGSASSQRVYITYRRASENMTQNTLAVTDICIIIPSKGETPPHTFCKVDK
NLNNSMWGSAVYLCYKKSVAKTNTISYKAGLICRYPEEDYESFPLPESVPLFCLPMGATI
ECWPSNSKYPLPVFSTFVLTGASAEKVYGAAIQFYELYPEENLTEKQRSQLGLAAAVEGK
SDTCRTVQTNKCICLLSHWPFFDAFKKFLTFLYRYSISGPHVLPIEKHISHFMHKVPFPS
PQRPRILVQLSPHDSLILSQPVSSPLPLSGGKFSTLLQNLGPENAVTLLVFAVTEHKILI
HSLRPSVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGIDSRYFDLYDP
PPDVSCVDLDTNTISQTGDKKAIAWKILPKKPCKNLMNTLSNLYQQLAELQQRPREDALM
ELAMNDYDFNSGKKLHLLDLEIQEAFLCFMASILKGYRSYLRPITEAPSETATDASSLFE
LQGFLKSRDRSHQKFYTLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKVDMDKTGET
RLIELDESYKSEHTVFITPPEIPHLPNGEEHPLQYSYNGFPVLKLDLFERPEGFLTAPNN
KLSSKASSPNSPSPMFRRTKQEIKSAHKIAKKYSSIPQMWSRCLLRHCYGLWFICLPAYV
KVCHSKVRALRTAYDVLQKMHTKKIDPPDEVCYRVLMQLCGQYGQPVLAVRVLFEMQKAG
IDPNAITYGYYNKAVLESTWPSSNRGGYFLWMKIRNVVLGIAQFKKALKKQPASTSHTAI
PGGLSDFGNNTSFKEEARQGKTCLQDIQEQKEDKRESDSSSLSVCDNASLCPCLSEVEST
KGSGDCLPKLNYQNSSNEKATSSIVRLNGTVDSTVAEASTESSVGLLFTSSFEGASEAEV
IKSKSLRKRHKSAVEPAIREISWESRNRNLSGDGLVGLMINRINQEANPGEIVEKLGADA
KILSSALQKSMRPKTLNIRNSSLESKRESLEKESSDEDAAFDCSFTDKTESPVIFDLEDL
DAEPETSTAVKPSSEKSRRLQRKSSFPVKPVEKTDVETGFDPLSLLVAETEQQKEDEDDD
DDRSVSTPSARRDLAEEIVMYMNNMSSPLSSRAPSIELQKPWDDRNANKKSPTVIQPCRR
SSLPPNSPRPLSLTKSKSYHAKNEERPRDRLWSSPAYSPHSPAKEQPQDATSALTLVSSP
SFNLDTLLTPKFDVLKSSMFSAGKGVAEKASKWYSKFTMYAASSKDQNSDRASVSSLGAL
DSESTSLTDEDVCNDFESASPQENTASEIKGIGLSRTSLESSASHDGSAKHFDQCGSLSK
FPLPDKSELISSCSTSSTSVFQNYAMEVLISSCSRCRTCDCLVHDEEIMAGWTADDSNLN
TTCPFCGNLFLPFLSIEIRDLRRPGRYFLKSSPSTENMQFPSLFSNQSGKSCNTAATVGL
TTSLMSVQEDLNSNSKSKQHDNICARSIQIPSGRRQNTCGSECTSHPVARSISTFGPLEE
DEKENQKISHIIPTGSLPATLQGPTDSLGLEWRLPSPDPITVPYLSPLVVWKELESLLEN
EGDHAITVADFVDHHPIVFWNLVWYFRRLDLPSNLPGLILSSEHCNKNSKIPRKCMSEDS
KYVLIQMLWDNMKLHQDPRQPLYILWNAQSQNRTLLFETQKYPMVHLLQKDDDSFNQELL
RSMVKSIKMNDVYGPMSQILERLNKWPHIKRQRSLYREILFLSLVALGRDNIDIDAFDRE
YKLAYDRLTANQVKNTHNCDRPPSTGVMECRKIFGEPYL
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaaggggctcgtgttgctgactactttgttgtcgcaggattaacagatatt
tcaaaaccactagaggaagaaatccacttcaatgatgcttgccataaaatcgctaaacca
aaagaacctattacagatgtaacagtaattaataaatccctgggggaggaagttccccag
ggatataaatgcatagatgttactccctcgggactgtctgcagatctcaataatggcagt
cttgtgggaccacaaatatatctttgttatcgccgaggaagggataagcccccacttact
gatctgggggttttatatgatgggaaagaaagagtaaagcaaggctgtgaaataattcaa
actactccatatggtcggcctgctaatattagtggcagtgcctcatcacaaagagtgtac
atcacttaccgaagagcatccgaaaacatgacacaaaacacgttggctgttacggatata
tgtataatcataccaagtaaaggagaaacccctccacatacattctgcaaggtcgacaag
aatcttaataatagtatgtggggctcagcagtatatttatgttataaaaagtctgtggca
aaaaccaacaccatatcatataaagctggtttaatatgcagatatcctgaagaagattat
gaatcattcccattaccagaatccgtgcctcttttttgtctacctatgggtgcaacgatt
gaatgttggccatctaacagtaaataccctctcccagttttttctacatttgtactaact
ggagcttctgcagaaaaggtatatggtgctgctattcagttttatgaactgtatcctgaa
gagaatctcacagagaaacaaagatctcaactgggattagcagctgctgttgagggaaag
tcagacacatgcagaacagttcaaacaaataaatgcatctgtctcctctctcactggcct
ttctttgatgctttcaagaagtttcttacctttctctatcgttactccatttctggtcca
catgtcctacccattgagaaacacatttcccatttcatgcataaagttccttttccatcc
cctcagaggccaagaattctagttcagttatcgccacatgacagcctgattcttagccaa
cctgtgtcatcaccccttccactgagcgggggcaagttttctacactacttcagaattta
ggacctgaaaatgcagtaactctacttgtatttgctgtgacagagcataaaattctcatc
cattcattgcgaccttctgtccttactagtgtgacagaggcattagtctctatgatattt
cccttccactggccttgcccatatattcctctctgtcccttggcactggcagatgtgtta
agtgcaccatgcccattcatagtgggaattgattcaagatactttgacctctatgaccct
ccaccagatgttagctgtgttgacctagataccaatacaatttctcaaactggagataag
aaagctatcgcatggaagatcttaccaaagaaaccctgtaaaaatctgatgaacacttta
agtaatttatatcagcaactagcagaattgcaacagagaccaagagaagatgcgttaatg
gagttggcaatgaatgactatgactttaattctgggaagaaattgcatctgctagatttg
gagatccaggaagcattcctgtgtttcatggcctccatactaaaaggttacagatcttat
ctcaggccaataacagaggcaccctctgaaacagccacagatgcaagttctctctttgaa
ctacaaggtttcctcaaaagtcgagatcgttcgcatcagaagttttacacactgatgacc
aaaactcaaatgttcattcgcttcattgaagaatgttcttttgtcagtgacaaggatgca
agccttgcattttttgatgactgcgtagataaagtagatatggacaaaactggggaaaca
cgactaatagagctggatgagtcatacaagagtgagcatacagttttcataacaccaccc
gaaatccctcatctgccaaatggtgaggagcatcctctacaatacagctataatggattt
ccagtattaaaactagatctgtttgagcgacctgaaggatttctcacagcaccaaataat
aaactgtcctcgaaagccagtagtcccaacagtccgtcgccaatgttcagaagaactaag
caggaaattaaatctgcgcataaaattgctaagaagtactcatccataccccagatgtgg
tccaggtgtttgttacgtcactgctatggtctttggtttatctgccttcctgcctatgtg
aaagtgtgccattcaaaagtcagggctctgagaaccgcatatgatgtgctacagaaaatg
cataccaaaaaaatagatccacccgatgaggtatgctaccgagtactcatgcaactgtgt
ggacagtatggtcagcctgtgctagcagtgagagtgctttttgaaatgcagaaagctggt
attgaccctaatgccattacttatggctactacaataaggctgttttggaaagtacctgg
ccttcaagcaatcgaggtggctatttcctatggatgaaaatacgaaatgttgttttagga
atagcacagtttaaaaaagcattgaaaaagcaaccagcaagcacttcgcatacagccatt
cctgggggactttcagacttcggcaataacacatcattcaaagaagaagccaggcaaggg
aaaacttgccttcaagatatacaagaacaaaaagaggacaagagagagagtgactccagt
tctctgagtgtatgtgataatgccagtctgtgcccgtgcctgtctgaagtggagagcaca
aaagggagcggtgactgcctacctaaactaaactatcagaactcaagtaatgagaaagcc
acttcgagcatagtgcggctcaacggtacagttgacagtaccgtagcagaagctagcacg
gagagttctgtaggattgctgtttacatcatcttttgagggtgccagtgaagcggaagtt
ataaaaagtaaatccttaagaaagagacataaaagcgcagtagaacctgccataagggag
atatcatgggaaagcaggaaccgcaatctgagtggcgatggcttagtgggactcatgata
aatagaataaatcaggaagcaaaccctggagaaattgttgaaaaactaggagctgatgcc
aaaatcctatcgagcgcattgcagaaaagcatgaggccaaaaactcttaatatcagaaat
tcctctttagaatctaagagagaaagcctggagaaagaatctagtgatgaagatgcagct
tttgattgcagttttacagataaaacagagtctcctgttatttttgatctggaagacttg
gatgcggaacctgaaacatctacagcagtgaaaccctccagtgaaaaatctagaaggctg
caaagaaagagcagctttccagtaaagccagttgaaaagacagatgttgaaactggattt
gatccattgtctctgctggttgctgagacagaacagcagaaagaggatgaggacgatgat
gatgatagaagtgtctctactccgtctgcaagacgagatttagctgaagaaatagtcatg
tacatgaacaatatgagcagccctttgtcaagtcgtgctccaagcattgagttgcaaaaa
ccctgggatgacagaaatgctaataaaaagagcccaacggtaatccaaccttgtaggagg
tccagccttcctccaaactccccaaggccgttgagtcttaccaaatccaaaagttatcac
gcaaaaaatgaagaaaggccaagagacaggctttggtcctccccagcttattccccacac
agtccagcaaaggaacagccacaggatgcaactagtgcattaacacttgtgtcttcaccg
tcattcaacttggatactctgctaacacctaaatttgatgttctaaaaagcagcatgttt
tctgctggaaagggggttgcagagaaagctagcaaatggtactcaaaatttacaatgtat
gctgcatcctcaaaggatcaaaattcagaccgagcaagtgtttcatctcttggagctctg
gactcagaatctacttctctaactgatgaagatgtctgcaatgattttgaaagtgcttct
cctcaggagaatactgcatcagaaattaagggaattggcctcagcaggacaagcctagaa
agctcagcttcccacgatggctcagcaaaacattttgaccagtgtggttctctttccaag
ttccctttacctgacaaatcagagttgatatcttcttgcagtacaagtagtaccagtgtg
tttcagaactacgctatggaggtcctcatctcaagctgttcacgatgtcgaacttgtgac
tgtttagttcatgatgaagaaatcatggcaggttggacagcagatgattcaaatctcaat
accacatgtccattctgtggaaatttatttctgccttttttaagcatagaaatccgagat
cttcggcgacctggacgttatttcctgaagtccagcccttctacagaaaacatgcagttc
ccatcacttttttcaaatcagagcgggaagtcctgtaacactgcagctacggtcggcctt
actacgtctctaatgtccgttcaagaggatttaaattcaaatagcaaatctaagcagcat
gacaatatttgtgccagaagtatccagatcccctcaggaagaagacaaaatacctgtggg
tcagaatgtacaagtcaccctgtagcaaggagtatcagtacttttggtccattggaagaa
gacgagaaggaaaaccagaagatcagccatatcattcctactggtagcctacctgctact
ttgcaaggaccaacagattccttgggcctggaatggcgcttacctagtcctgatcctata
acagttccttatctcagtcctctggtggtgtggaaagagcttgagagcttacttgaaaac
gaaggggatcatgcaataacagtggccgactttgtagatcatcatcctattgtgttctgg
aatttggtgtggtatttcagacgcttggacttgcccagcaacttaccaggattaatcctt
tcttctgagcactgtaataaaaactccaagattccacgaaaatgtatgtcagaggacagt
aaatatgttcttattcagatgctgtgggacaatatgaaattgcatcaggatccaaggcag
cctctgtatattttgtggaatgctcagagtcaaaatcgcactcttttgtttgagacccag
aagtacccaatggttcatttattgcaaaaagatgatgactcttttaatcaggagctcttg
agaagtatggtgaaaagcattaagatgaatgatgtgtacggaccaatgagtcaaatattg
gagagactgaacaaatggccacatattaaaagacagcggagcctttacagagaaatactg
tttctttcgcttgttgccctaggaagagataacattgatatagatgcttttgacagagag
tacaaactggcctatgatcgtctcaccgccaatcaagtgaaaaatactcataattgtgat
agaccaccaagtactggagtgatggaatgcagaaagatttttggagaaccgtatctttaa
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integrated database retrieval system
