Rissa tridactyla (black-legged kittiwake): 128914849
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Entry
128914849 CDS
T09443
Symbol
CHSY1
Name
(RefSeq) chondroitin sulfate synthase 1 isoform X1
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
rtd01100
Metabolic pathways
Module
rtd_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
128914849 (CHSY1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtd01003
]
128914849 (CHSY1)
Enzymes [BR:
rtd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
128914849 (CHSY1)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
128914849 (CHSY1)
Glycosyltransferases [BR:
rtd01003
]
Glycan extension
O-Glycan
128914849 (CHSY1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
DUF7164
Motif
Other DBs
NCBI-GeneID:
128914849
NCBI-ProteinID:
XP_054070468
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All DBs
Position
9:4053369..4133171
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AA seq
784 aa
AA seq
DB search
MAGRGRRAWLSVLLGLVLGFVLASRLVLPRASELAAAARPRRARPQGCRPPPAAAAPPRR
PGPPAQSFLFVGVMTAQKYLRSRAVAAHRTWSKTIPGKVEFFSSEGSDTSIPIPIVPLPG
VDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKGDKLENFLRSLNSSEPLFLGQ
TGLGTTEEMGKLALEPGENFCMGGPGVIMSREVLRRMVPHIGECLREMYTTHEDVEVGRC
VRRFAGVQCVWSYEMQQLFYENYEQNKKGYIRDLRNSKIHRAITLHPNKNPPYQYRLHSY
MLSRKIAELRHRTVQLHREIVLMSKYSNTEIHKDDLQLGMPPSFMRFQPRHREEILEWEF
LTGKYLYSGADGQPPRRGMDSSQREALDDIVMQVMEMINANAKTRGRIIDFKEIQYGYRR
VNPMYGAEYVLDLLLLYKKHKGKKMTVPVRRHAYLQQTFSKIQFMEHEEMDSKELASKIN
QDSGSLSFLSNSLKMFVPFQLSRSKVERKELKDKKINILIPLSGRFDMFARFMGNFEKTC
LIPNQNVKLVVLLFNSNSNPDKAKQIELMRDYRSKYPKADMQVLPVSGEFSRALALEVGS
SQFQNESLLFFCDVDLVFTTEFLQRCRANTVLGQQVYFPIIFSQYDPKIVYSGKVPSDNH
FAFTQKTGFWRNYGFGITCIYKGDLLRAGGFDVSIQGWGLEDVDLFNKVIQTGLKTFRSQ
EIGVVHVHHPVFCDPNLDPKQYKMCLGSKASTYGSTQQLAEIWFEKNDPNFGKSSNTNGS
VRTA
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccgcggccgccgcgcctggctcagcgtcctgctggggctggtgctgggcttc
gtgctcgcatcgcgcctcgtcctgccccgcgcctccgagctggcggcggcggcgcggccc
cgccgagcccgcccgcagggctgccgccctccgcccgccgccgccgccccgccgcgccgc
cccggcccgccggcacagagctttctcttcgtgggggtcatgacggcgcagaagtacctg
cggagccgcgccgtggccgcccaccgaacgtggtccaaaaccattcctggcaaggttgaa
ttcttctccagtgagggttcggacacctctattcccatccccatcgtgccacttccaggt
gtagatgactcttacccaccccagaagaaatctttcatgatgctcaaatacatgcatgac
cactacttggacaaatacgaatggtttatgagagccgatgacgatgtttacatcaaagga
gacaaactggagaacttcctcaggagtctgaacagcagcgagcccctctttcttggtcag
actggcctcggcaccacggaggagatggggaagttggcgctagaaccaggcgagaacttc
tgcatggggggaccaggagtgatcatgagccgggaagtcctgcggagaatggtgccccac
attggcgagtgcctgcgagagatgtacaccacccacgaggacgtggaagtgggaagatgc
gtacggagatttgcgggagtgcagtgtgtatggtcctacgagatgcagcagctcttttat
gaaaattatgaacaaaacaaaaaaggctacatccgagacctgaggaacagcaaaatacac
agagctataacgctgcaccccaataagaaccccccctaccagtacagacttcacagctac
atgttgagccgcaagatagcagagctgcgccaccggactgtacagctgcaccgggagatt
gtcctgatgagcaaatacagcaatacagaaatccacaaagacgacctgcagctggggatg
ccaccctccttcatgcgattccagccccgccaccgggaagaaatcttggagtgggagttt
cttacgggaaagtatttgtattcgggtgccgacgggcagccccctcggagaggaatggac
tcgtctcagcgtgaagcgttggatgacattgttatgcaggtcatggaaatgatcaacgcc
aacgctaagacccgggggaggatcatagatttcaaggaaatacagtatggctatcgcaga
gtaaacccgatgtacggagcagagtacgttcttgacttgttgcttctgtacaaaaagcat
aaggggaagaagatgacggtccccgtcaggaggcacgcgtacttgcagcagaccttcagc
aagatccagtttatggagcacgaagagatggactccaaagagctggccagcaaaatcaac
caggattctggatccttgtctttcctctccaactcgctgaagatgtttgttcccttccag
ctcagccgatcaaaagtagagaggaaggaactcaaggacaagaagatcaacatcctgatt
cctctctccggacgttttgacatgttcgcaaggttcatggggaattttgaaaagacgtgc
ctcattccaaaccagaacgtcaagctggttgtcctgcttttcaattccaactccaacccc
gacaaagcgaagcagatcgagctgatgagagattaccgctccaaataccccaaggctgac
atgcaggttttaccggtgtcgggggagttctcgagggcgctggctctggaagtcggatct
tctcagttccagaacgagtctttacttttcttctgtgatgttgacttagtgtttaccacg
gaattcctccagcgctgtagagccaatacagttttgggtcaacaagtatactttcccatc
atttttagccagtatgatccaaagattgtttatagtggaaaagttcctagtgacaatcat
tttgccttcacccagaaaacaggtttctggaggaactatggctttggtattacctgtatt
tacaaaggtgatcttcttcgagcgggtggctttgacgtctccatccaaggttggggcctt
gaagacgtagacctatttaacaaagtcattcaaactggcttaaaaactttccgaagccaa
gaaattggagtagtccatgtgcatcacccggttttttgtgaccctaatcttgatccaaaa
caatataagatgtgcttggggtccaaagcttcaacttatgggtccacacaacagctggct
gaaatatggtttgaaaaaaatgacccaaattttgggaaaagcagcaatactaatggctca
gtgaggacagcctaa
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