Rissa tridactyla (black-legged kittiwake): 128914909
Help
Entry
128914909 CDS
T09443
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
128914909 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rtd01009
]
128914909 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtd04515
]
128914909 (PCDH11X)
Protein phosphatases and associated proteins [BR:
rtd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128914909 (PCDH11X)
Cell adhesion molecules [BR:
rtd04515
]
Cadherins
Protocadherins
128914909 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
K319L-like_PKD
Fibulin_C
Cadherin_4
TMEM154
Big_9
Motif
Other DBs
NCBI-GeneID:
128914909
NCBI-ProteinID:
XP_054070592
LinkDB
All DBs
Position
9:complement(31189603..31699053)
Genome browser
AA seq
1245 aa
AA seq
DB search
MDLLSGTYLLAVLLACIVYQSGAQEKNYTVREELPENVLIGNLLKDLNLTLHPDVPLSSP
LQFKLVYKTGDVPLVRVEENTGEIFTTANRIDREKLCSGIFSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLK
PKTAPKRTFGSITNDQGQNVFGLDIIETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDG
GSPPRSSTAILQVTVTDVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQI
HFYFSNQISSLAKRLFAIDNTTGLITIRERLDREESPVHKLTVLASDGSSTPSRATVTVN
VTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADLNGKVTCFTDHDV
PFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNSP
VFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTA
VRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLP
MYGTVGLITVTDADSGENAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVK
AVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSATPGSVVTRVFAVDND
TGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQPESLYT
IALVHLFVNETVTNSSYVQELVRRNMETPIGQNIGDGEITPQTNDYVKIIIAIIAGTMTV
ILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVT
IEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPT
FQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGS
IHTRQHTKEMGRPQTPLKETTLEPWTQPQPQRRVTFHLPDGSQESCSDSGLGDHEPTSGA
GTSHPLPLGFPQEEYYEQASPNSRTEGDGNSDPESTIEVNLQKALAEASETCTQECLILG
HSDNCWMPPSLTQYQQSNTPLPSFGFQQGWGRGARPEGRHTLGRPLPKDDTDKGQGGPRP
QFYNTCERHCASEDPVKVIPLANFATSHQAPVSGSSTTFIHEHQL
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctgtctggaacctacctcttggcagtcttattagcctgtattgtatatcaa
tctggcgcacaggagaagaattacaccgtgcgggaagaactgcctgaaaatgtcctcatt
ggcaatttgctcaaggatctgaacctaacgctccacccggatgtgcccctttcatcacca
ctacagttcaagcttgtgtataagactggtgatgtaccgttagtacgagtggaggagaac
actggtgagatattcacaactgcaaaccgcatagaccgagagaagctgtgctctggcatc
tttagtgagaatcgctgcttttatgaggtggaggttgctgttttgcccgatgaagttttc
agactggtcaagatcagattcctaatagaggatataaatgacaatgcccccctcttcccc
tcaacagttattaacatctctatccctgaaaacacagcaattaattctcgctattctgtc
ccatctgccattgatccagacattggtgtgaatggtattcaacattatgaactccttaag
cccaaaacagctccgaaaaggacatttggatccattacaaatgatcagggtcaaaatgta
tttggtcttgatataattgagacacctgagggagataagtggcctcaactgattgtccaa
cagatcctggatagggaacagaaggatacctatgtgatgaaaattaaagttgaagatggt
ggaagccctccaagatctagcactgccatcctgcaagtcacagtgactgacgtgaatgat
aatcgcccagtcttcaaagagaatgacattgaagttagtgttccagaaaatgctccagtg
ggcacttctgtgtctcagctccatgccaccgatgcagacctgggctcaaatgcacaaatc
catttctacttcagcaatcagatttccagtttggccaaaaggctctttgccattgataac
accactggcctcatcactataagagaacgactagacagggaggaatctcctgtacacaaa
ctaactgttttggcaagtgatggcagttcaactccatcaagagcaacagtgactgttaat
gtcacagatattaatgacaatgtcccatcaatagacacaagatacatcatcaatccagtg
aatgggacagtacttttgtctgagaaggctccccttaatacgaaaattgcgttgataaca
gtaatggacaaggatgctgatctgaacggaaaagttacttgttttacagatcatgatgtc
ccttttaggctaaagccagtgtttgataatcagtttctcctggagacagccacatttctg
gattatgaagccacaagggaatatgccattaaaatagtggcttcagattcagggaagcct
cccttaaaccagtctgccatgctcctgatcaaaattaaagatgaaaatgacaattcccca
gtttttacacagcctatcataggtctttccatccctgaaaacaatgctcctggtactcag
ctaacgaagataagtgctacggatgctgacagtgggcgcaatgctgagatcagctatatc
ctgggttctgatgcgccccctattttcaaccttgaccgccgtacaggcattctcacagca
gtgagaaagctggacagagaaaagcaagacaggtactcctttactgtgctggctaaggat
aacgggatgccacccttgcagaccaatgctactgtgacagtgtctgtcctggaccagaat
gataacagcccagctttcacacataatgaatataatttctatgtgccagaaaacttaccc
atgtatggcacagtggggcttatcacagttacagatgctgactccggagagaatgctgca
gtcactctctctatattaaatggtagagataatttcattatagatccacttactggtgta
ataagacctaatattacctttgatagggaacagcaggggtcatatactttccaggtgaaa
gctgtggatggaggaagactgcagcgttcctcaactgccaaagtgaccatcaatgttgtt
gatgtaaatgacaacaggcctgtttttgttattccttcatctaattattcgtatgagttg
gttccaacatcagccactccagggtctgtagttactagagtctttgcagttgataatgac
acaggaatgaatgcagagctccgctatagcatcataggtgggaactcaaggggcttgttt
acaattgaccaattaacaggcaatattactttgaaagagaaggtaattacatcagatcat
ggcttgcacagactggtgataaaagtcaatgacctaggacagccggagtctctttatact
atagctcttgtgcatttgtttgtgaatgagacagttaccaacagttcctacgtacaagag
ctagtgcgcaggaacatggaaactccaattggccagaatattggggatggtgagataacc
ccacaaaccaatgattatgtcaagatcatcattgccattattgcaggcactatgacggtt
attctggtaatttttgtaactgctttagtacgatgccgccagacgcctaggcacaaggtt
gtccaaaaaaacaagcagagtggtgaatgggtttccccaaaccaagagaacaggcagata
aagaagaagaagaagaagaagaagcgctctccaaaaagtctcctcctcaacttcgtgact
attgaagaatctaaacctgatgatcctggccacgagcacataaatggcactttagacatt
cctgtagaactagaagaacagactatgggaaaatataactgggccactacaccaaccaca
tttaagcctgatagcccagatttagcaaagcactacaagtctgcttctccgcagcctacc
tttcaaattaaacctgagactcctgtaccccccaagaagcaccatgtcattcaggaactg
cctctagataacacctttgtggtgggctgtgactcactttccaagtgctcatcaagcagc
tcggacccttacagtgtttctgaatgcagctgtcaaggaggcttcaagaccccaggctcc
atacacaccagacagcacacaaaagaaatgggaaggccacaaactcctttgaaagagaca
accttggagccttggactcagccacagcctcagcgccgtgtcacgtttcacctcccagat
ggctcccaggaaagctgcagcgacagtgggcttggagaccacgagcccacgagcggtgct
ggcacgtcgcaccctctgcccctcggcttcccccaggaggagtactacgagcaagcttcg
cccaacagccggacagaaggagatggcaactcggaccctgagtccactatcgaagttaat
ctccagaaagccctggctgaagcctctgaaacctgcacacaggagtgtctcatcctaggc
cattctgacaactgctggatgccaccttctttgacacagtatcagcagtccaacacccct
ttgccatcgtttggcttccagcaaggctggggccgaggagccaggcctgagggacgacac
actcttgggaggccccttccaaaggatgacactgacaaaggccagggtgggccccggccc
cagttctacaacacctgcgaaagacattgcgccagcgaagatcccgtcaaagtcattcct
ctggcaaacttcgccacgtcccaccaggcaccagtgtctgggagtagcactacgtttata
catgagcaccagctataa
DBGET
integrated database retrieval system
