Rissa tridactyla (black-legged kittiwake): 128914923
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Entry
128914923 CDS
T09443
Symbol
RLIM
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128914923 (RLIM)
Enzymes [BR:
rtd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128914923 (RLIM)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128914923 (RLIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING-like
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
128914923
NCBI-ProteinID:
XP_054070610
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All DBs
Position
9:46725654..46744181
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AA seq
607 aa
AA seq
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MLFLFCTFPLIKMESSDSSDKGNVDQSEAQRQSQLDRLDREEAFYQFVNNLSEEDYRLMR
DNNLLGTPGEITEEELLRRLHQVKEGPPQQNSDENRGAESAEDVSNGDSIIDWLNSVRQT
GNTTRSGQRGNQSWRAVSRTNPNSGDFRFSLEINVNRNNGNTNPETENEPSVEPSSGEDL
ENSQSDSEIPRSESPSVRQPGSERSTSEELTTEEASPPRGQRRARSRSPEQRRTRARTDR
SRSPINPVSEPPRRSHHNTSSQTLDHSSVNEAEGSSRTRQHVTLRQHAVGTEMPNENAVL
FSTPETRPVPQAAGSSETNGTSESATPGQRPPTIVLDLQVRRVRPGEYRQRDSIANRTRS
RSQTPNNTVTYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTM
LRQIMTGFGELSYFMYSDSDADPSGPTPNQNVDASEAQNGGGGTSSNESTDVSSGEVYEG
GNEGGSTSGARREGRNTRGSVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLA
MRNFGESDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLAS
GNRESVV
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgctattcctattctgtactttcccactcatcaagatggaaagctcagattctagtgat
aaaggaaatgttgatcaatcagaagcacaacgtcagagtcagctagatcggttagatcga
gaagaagctttctatcagtttgtaaacaacctgagtgaagaggactacaggcttatgaga
gataacaatttgctaggaacaccaggtgaaattactgaagaagagttgctgagaaggcta
caccaagttaaagaaggtccgccacagcaaaacagtgatgagaatagaggtgcggagtct
gcagaagatgtctcaaatggagattctattatagactggcttaattcagtccgacagact
ggaaatacaacacgaagcggacaacggggaaaccagtcttggagagcagtgagccggact
aacccaaatagtggtgacttcagattcagtttggaaataaatgtcaaccgtaataatggg
aacacaaatccagaaactgagaatgagccatctgtagagccttccagcggggaggatttg
gaaaacagccaaagtgactctgaaattccaaggtctgaatcgccatctgtaaggcagcct
ggatcagaaaggagcacttcggaggagctaacaactgaggaagcttcccctcctagaggg
cagaggagagcgagaagtaggagtccagaacagcggagaacgcgggctaggactgataga
agtaggtcacctattaatccagtgagtgagcctcctcgcaggtctcatcacaatacatca
tctcaaacacttgaccactcctcagtgaatgaagccgagggaagctctagaactaggcag
catgtgacgttaaggcagcatgcagtggggactgagatgccaaatgaaaatgcagttttg
ttttcaacccctgaaacaagacctgttcctcaagcagcaggttcttcagaaactaacggc
accagtgagtctgcaactcctggtcagaggccacctaccatagtacttgatcttcaggtg
agaagagttcgtccaggagagtatcggcaaagagacagcatagccaacagaactcggtcc
aggtcccagacacctaacaacacggtcacttacgaaagcgaacggggagggtttaggcgc
acgttttcacgttcagaacgggcgggagtgagaacttatgtcagtaccattaggattcct
atccgtaggatcttaaacacaggcttgagtgagactacgtcagttgctattcagactatg
ctaaggcagataatgacaggcttcggagagctgagttactttatgtacagtgatagtgat
gcagatcctagtggcccaactccaaatcagaacgtggatgcttctgaggcacagaacgga
ggtggtggtacttcaagcaatgaaagtacggatgttagctcaggggaggtgtatgaaggt
ggcaatgaaggtggttcaacatctggtgccagacgggaaggtcggaatacaaggggatcg
gtcacatttgaagaaagtggctctctaccattccttagcctagcacaatttttcctacta
aatgaagatgatgatgaccaaccaagaggactcaccaaagaacaaattgacaacctagcg
atgaggaattttggtgagagcgatgctctgaaaacctgtagtgtgtgcattacagagtac
acggaaggcaacaagctccgtaaattgccttgttcgcacgagtatcatgtccactgcatt
gatcgctggttatcagaaaattccacttgtcccatttgtcgcagagccgtcttagcttct
ggtaacagagagagtgttgtctaa
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