Rissa tridactyla (black-legged kittiwake): 128915183
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Entry
128915183 CDS
T09443
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
128915183 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128915183 (MYO5C)
04131 Membrane trafficking [BR:
rtd04131
]
128915183 (MYO5C)
03029 Mitochondrial biogenesis [BR:
rtd03029
]
128915183 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtd04812
]
128915183 (MYO5C)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
128915183 (MYO5C)
mRNA cycle factors
P-body specific factors
128915183 (MYO5C)
Membrane trafficking [BR:
rtd04131
]
Others
Actin-binding proteins
Myosins
128915183 (MYO5C)
Mitochondrial biogenesis [BR:
rtd03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
128915183 (MYO5C)
Cytoskeleton proteins [BR:
rtd04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
128915183 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
PRK
Motif
Other DBs
NCBI-GeneID:
128915183
NCBI-ProteinID:
XP_054071190
LinkDB
All DBs
Position
9:complement(14235342..14271956)
Genome browser
AA seq
1736 aa
AA seq
DB search
MALAELYTQYNRVWIPDNEEVWQSAEITKNYKAGDRFLHMQLEDGTELNYPVDPAALPPL
RNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKLIYTYSGIILVAINPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYTMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDQCYQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAMQPEFKHLKLGSAEEFNYTRMGGSTVIEGVDDR
ANMVETQKTFALLGLKGDFQMDVFKMLAAILHLGNVGITAVGDDRSSISLEDKHLNIFCE
LLDLNCDKMAQWLCHRKIITTSETVIKPMTRTQAVNARDALAKKIYSHLFDFIVERINQA
LQFPGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGRDENWLQKLYNNFVNKNALFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVHEVLIEILKESKFHLCENFFQDNPVSVSPF
SSTINIKSARPVLKSPNKQLRMTVGNKFRSSLSLLMVTLNATIPHYVRCIKPNDEKLPFE
FDSKRVAQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMTQQELSINDKKQICKIV
LQRLIQDHNQYQFGRTKIFFRAGQVAYLEKLRSDKLRHACIMIQKSIRGWLQRKKFLRVK
QAAITIQQYFRGQRTVRQAITARTLKQTWAAIIIQKYCRGYLVRRLCQLILVAAVTIQAY
TRGFLARKKYRKMLEEHKAVILQKYARAWLARRRFQNIRRFVLNIQLSYRVQQLQKKIEE
QSRENHGLLERLTNLASTHMSDVDMIQKLELDLEKLTAQKRIYEEKGKKYKEDSEQKILK
LENLNKELQEQKETLEIKLQEKTEEMKEKMDDLTKQLFSDVQKEENQRMILEKNFQNQKQ
DYEKEIELLKGEIKTLKEEKTQLQHQIQQEIVIQDGLKMEVGQLTKQAQKIPELQKEIEL
LQTQKLDVEKQAQSQKRELREKMSEVAKQLLESYDVEDVRSRLSMEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKEIYEKEIEGLNLKVEHLSQDINHLQKLFREENDINDGIRLE
VSRLTSENLVIPDLKQQVSELENQKLDLENRLQEQTVKLKEMSNRLHYELEGDRTQRRTN
EAQNEIDIKEKERLKVTTQEIEGLSNGLMQDEIQDEVKSKIKQETTRLTVENMDLEEKLD
MKDRIIKKLEDQIKTLTKTLEKTEAHVPTLSKEYVGMMEYKKEDEDRIIQNLILDLKPRG
VVVNMIPGLPAHILFMCVRYADYLNDADMLKSFMNVTIDGIKRVVKEHSEDFEMLSFWLS
NTYYFLNCLKQYSGEEEFMKSNTPRQNKNCLKHFDLSEYRQILSDLAIRIYHQCIIVMEN
NIQPMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDTYTMTSILQQLSYFYSTMCQNG
LDSELLKQAVKQLFFLIGAITLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQNSN
AKETLEPLSQAAWLLQVKKITDDDAKEICEHCTSLSTVQIVKILNSYTPIDDFEKRVTPS
FVRKVQAMLNNREDVPQLMLDTKYLFQVTFPFTPSPHALEMIQVPSSFKLGFLTRV
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggccgagctctacacccagtacaatagggtttggatccctgataatgaagaa
gtttggcagtctgcagaaatcacaaaaaactacaaagctggagaccgttttctccacatg
cagttagaagatggaactgaacttaattaccctgttgatccagctgctttgccaccccta
cgaaatcctgacatacttgttggagaaaatgatctcactgcacttagttatctccatgaa
ccagctgttctacacaatcttaaagttcgttttgtggagtctaagcttatctacacctat
agtggaataattttggttgcaataaacccctataagcagttgccaatatatggagatgct
attatccatgcatatagtgggcaaaacatgggggacatggatccacatatatttgctgtg
gcagaagaagcatacaagcaaatggcaagaaataacaaaaatcagtctattatagtcagt
ggagaatcaggagctggaaagactgtgtctgcaagatacactatgagatactttgccact
gtgagtaagtcaagcagcaatgcacatgtggaggataaagtattggcgtccaatccaata
accgaggctgttggcaatgcaaaaaccacacggaatgataatagcagtcgatttggaaaa
tacactgaaatcagttttgatcagtgttaccaaatcattggagctaacatgagaacatac
ctgcttgagaagtccagagttgtctttcagtcagagaatgagagaaactaccatatattt
tatcagttgtgtgcatctgctatgcaacctgaatttaagcatctgaaattgggaagtgca
gaagaatttaactacacaagaatgggtggcagcacagtaatagaaggagttgatgacaga
gcaaatatggtggagactcagaagacatttgccttactgggtctgaagggggattttcag
atggatgtttttaaaatgctggcagcaatcctgcacttaggcaatgtgggaataacagct
gttggagatgacagatcatccatcagtctggaagataaacatctcaatatattctgtgaa
cttttggatttaaactgtgacaaaatggcacaatggctttgccaccgaaagattatcact
acctcagagactgtaataaagccaatgacaaggactcaggctgttaatgcaagggatgct
ctggcaaagaagatctattctcatttatttgactttattgtggaaagaattaaccaagct
ttgcagttccctggcaaacaacatacttttattggtgttttggacatttatggctttgaa
acatttgatgtgaacagttttgaacaattttgcatcaattacgctaatgaaaaactgcag
cagcaatttaacctgcacgtctttaaacttgaacaagaagaatatatgaaggaagatatc
ccatggactttaatagacttctatgacaaccagcctgtcattgaccttattgaagctaaa
atgggaattttagaacttctggatgaagagtgcttgttacctcatggaagagacgaaaac
tggcttcaaaagctgtataataattttgtcaataaaaacgcactctttgaaaagccaagg
atgtcaaacacatctttcatcattcaacactttgctgataaggtagaatataaatgtgaa
ggatttctggaaaaaaacagagatacagtacatgaagtattgattgaaatcttgaaagag
agcaagtttcatctgtgtgaaaatttttttcaagacaatccggtgtccgtttcacctttc
agttcaactataaacatcaaatctgcaagacctgttctcaagtcacctaacaaacagctc
cggatgactgttggcaataagttccggagttctttgtctttacttatggtgacactgaat
gcaaccatccctcattatgtacgatgcataaagccaaatgatgagaagttgccttttgag
tttgattcaaaaagagtggctcagcaactgcgagcgtgtggtgttttggaaactattcgg
attagtgcacagagctacccatccaggtggacttacattgagtttttcagccgttacagc
attcttatgacacagcaggaactctccataaatgataagaagcagatttgcaagattgtt
ttgcagcggctaatccaggatcataaccagtatcagtttgggagaacaaaaattttcttc
agagcaggacaggttgcttacttagaaaaactgcgatcagataaactgagacatgcatgc
atcatgatccaaaagagtattcgaggctggctgcagcggaagaaattccttcgcgtaaag
caagcagctattacaatacagcagtatttccgggggcagcggactgtacggcaagctata
actgcaagaactctgaagcaaacatgggcagctataataattcagaaatactgtcggggt
tacctggtccgtagactttgccagctcatccttgtggctgctgtaacaattcaagcttat
acaagaggatttctagcaagaaaaaaataccggaagatgctcgaagaacacaaggctgtg
atccttcagaaatacgcccgtgcgtggcttgccaggcgcagatttcagaatatccggcgg
tttgtattgaatatccagctttcctacagagttcagcagctgcagaaaaaaatagaagaa
cagagtagagaaaatcatggtttgctggaacgattgaccaatctggcttcaactcatatg
agcgacgtggatatgattcaaaaactcgaattagatcttgaaaagttaactgctcaaaag
agaatatatgaagagaaagggaaaaaatataaagaggacagtgaacagaaaatcttaaaa
cttgagaatctgaataaagaattacaagaacagaaagagaccttagaaataaagctccaa
gagaaaactgaggaaatgaaagagaaaatggatgacctcacgaagcaactcttcagtgat
gtacaaaaagaagaaaatcagagaatgatacttgagaaaaatttccaaaatcagaagcag
gactatgaaaaggagattgaattgctcaagggagaaattaagactctgaaagaagaaaaa
acgcagctacaacatcaaattcagcaagaaattgtcattcaggatggcttgaaaatggaa
gtaggacaacttacaaaacaagcccagaaaatacctgagttgcaaaaggaaatcgaactg
ctgcagacacaaaaattggatgttgaaaagcaggcccagtcacagaagcgagagctgagg
gaaaagatgtcggaagttgcaaaacagcttcttgaaagttatgatgttgaagatgtaaga
agcagactctctatggaggacttagaacacttaaatgaggatggagaactgtggtttgct
tatgagggcttgaaaaaagctacaagagtattggaaagtcatttccagtcccagaaagaa
atatatgaaaaggagattgaaggtttgaaccttaaagttgaacatcttagccaagatatt
aatcatctacaaaaattatttcgagaggaaaatgacataaatgatggtattcgacttgaa
gttagcagactaacttcagaaaacctggtgatcccagatcttaaacagcaagtttctgaa
cttgaaaatcaaaaattagatcttgaaaaccgccttcaagaacaaactgtaaagttgaaa
gagatgtctaatcggctgcattatgaactagaaggggatagaacacaaagacgaacaaat
gaggcccagaatgaaatagacataaaagaaaaagagaggctgaaagtcacaacccaagaa
attgaggggctgagcaatggtttgatgcaagacgaaatccaagatgaagtaaaaagcaag
ataaagcaagaaacaactcgacttactgtggaaaacatggatcttgaagaaaaactagac
atgaaagacagaataataaaaaaattggaggatcagatcaaaactcttaccaagactctt
gaaaaaactgaagctcatgtgccaactttgtccaaagagtacgttggaatgatggagtac
aaaaaagaggacgaagacaggatcattcaaaatctgatcctcgatctaaagccgcgtgga
gttgtagttaatatgatacctggccttccagctcacatcctattcatgtgtgtgaggtat
gcagattacctgaatgatgctgacatgctgaaatctttcatgaatgtaaccattgatggt
atcaaacgagttgttaaggaacattcagaagactttgagatgttgtccttctggctttcc
aatacatactattttcttaactgtttgaagcagtacagcggggaagaggaatttatgaag
agtaacactccacgtcagaataagaactgtttgaagcattttgatctctcagaatacaga
caaattcttagtgatctggctattcgtatctatcaccaatgcattattgtaatggagaac
aacattcagcccatgatcgtaccaggcatgctggaatatgaaagtcttcagggaatttct
ggcttgaaacctacagggttccgtaaacgttcttctagtatagacgacacagatacctac
acaatgacctctatcctgcaacagctcagctatttttatagtactatgtgccagaatggc
ttggactctgagcttctaaagcaggcagtgaagcagcttttctttctgattggagctatc
accctcaatagtctcttcctccgcaaggacatgtgctcttgtagaaaaggaatgcagata
agatgtaatatcagctacttggaagaatggcttaaggacaagaatcttcaaaacagcaat
gccaaagaaactttggagcctctgtctcaagcagcctggctccttcaggtcaaaaagatc
acagatgatgatgccaaggaaatatgtgaacactgcacatctctttctactgtgcagata
gttaagattctcaactcatatactccaatagatgattttgagaaaagagtgactccatca
tttgttcgtaaagtccaggctatgctaaacaatcgggaggatgttccacagttgatgctc
gataccaaatatctctttcaagtgacgtttcctttcaccccctctccacatgccttggaa
atgatacaagtccccagcagcttcaaacttggctttctcacaagggtttaa
DBGET
integrated database retrieval system
