Rissa tridactyla (black-legged kittiwake): 128915355
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Entry
128915355 CDS
T09443
Symbol
MEX3B
Name
(RefSeq) RNA-binding protein MEX3B
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128915355 (MEX3B)
04121 Ubiquitin system [BR:
rtd04121
]
128915355 (MEX3B)
Enzymes [BR:
rtd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128915355 (MEX3B)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
128915355 (MEX3B)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128915355 (MEX3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-C3HC4
RING_XB3-XBAT31
KH_2
Prok-RING_4
KH_DEAH11_2nd
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
128915355
NCBI-ProteinID:
XP_054071598
LinkDB
All DBs
Position
9:complement(10842393..10845442)
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AA seq
563 aa
AA seq
DB search
MPSSLFADMERNGSGGGGGGGGGGGGETLDDQRALQIALDQLSLLGLDNDETGSIYDSEP
RKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPLFVVTGRKED
VAMARREIISAAEHFSMIRASRNKNTALNGTVPGPPNLPGQTTIQVRVPYRVVGLVVGPK
GATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIAMRTGGIIELTDEN
DFHANGTDVGFELNGTGSLWSKPTPPSITPTPGRKPFCNYRNDSSSSLGSASTDSYFGGG
TGGGGGARLADYSPPSPALSFTHNGNNNNNSANGYVYGGGGGGGGGEVLSSPDCCSDLPF
DSPPGFDLAPAPPPGAALIWPQFERGPAAPPSPAASPAAAAFPGAAPANANLALLVSGPR
RGGGAPPPARLSPPLHGSAAGPEHPLARRVRSDPGGRLLAASSYPLYGNGLGSHLPGLPS
DSSASSSSSSSSSSSSSSCSSSGLRRKGSRDCSVCFESEVIAALVPCGHNLFCMECANRI
CEKTEPQCPVCHSAVTQAIRIFS
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctcgctttttgcagacatggagaggaacgggagcggcggcggcggcggcggc
ggcggaggcggagggggagagaccctggatgaccaaagagcccttcagatcgccctggac
cagctctccctgctggggctggacaacgacgagacgggctccatttacgacagcgagcct
cggaaaaagagcgtgaacatgacggaatgcgtgccggtgcccagctcggagcacgtcgcc
gagatagtggggagacaaggttgtaaaatcaaagctctgcgggcaaagaccaacacctac
atcaagaccccggttcgcggggaggagccgctctttgttgtgactggcagaaaggaagat
gtggccatggcccgcagggagatcatctcggcggccgagcacttctccatgatccgagcc
tcgcggaacaagaacacagccctgaatggcaccgttcccggccccccgaacctgcccggc
caaaccaccatccaggtgcgggtgccttatcgtgtggtgggcttggtcgtggggcccaag
ggggccaccatcaagcgcatccagcagcagacacacacctacatcgtgaccccgagccgg
gacaaggagccggtcttcgaggtgacgggcatgcccgagaacgtggaccgggcccgggag
gagatcgaggcgcacatcgccatgcgcaccggcggcatcatcgagctgacagacgagaac
gacttccacgccaacggcacggacgtgggcttcgagctgaacggcacgggcagcctgtgg
agcaagcccacgccgcccagcatcacgcccaccccgggccgcaagcccttctgcaactac
cgcaacgacagctccagctcgctgggcagcgcctccaccgactcctacttcggcggcggc
accggggggggcggcggggcccgcctggccgactacagccccccgagcccggcgctgagc
ttcacccacaacggcaacaacaacaacaacagcgccaacggctacgtctacggcgggggc
ggcgggggcggcggcggcgaggtcctctcctccccggactgctgctccgatctgcccttc
gactcgccgcccggcttcgacctggcccccgccccgccgcccggggccgccctcatctgg
ccgcagttcgagcgcggccccgccgcgcccccctcgcccgccgcctcgcccgctgccgcc
gccttcccgggcgcggcgcccgccaatgccaacctggcgctgctggtgagcggcccccgg
cgcggcggcggcgccccgcccccggcgcggctctccccgcccctgcacggcagcgcggcc
gggcccgagcacccgctggcgcggagggtgcgcagcgacccgggcgggcggctgctggcc
gcctcctcctacccgctgtacggcaacgggctgggctcccacctgccggggctgccctcc
gactcgtcggcctcctcctcctcctcctcctccagctcctcgtccagctcctcctgctcc
tcgtccgggctgcggcggaagggcagccgcgactgctcggtgtgcttcgagagcgaggtg
atcgcggcgctggtgccctgcggccacaacctcttctgcatggagtgcgccaaccgcatc
tgcgagaagacggagccgcagtgccccgtctgccacagcgccgtcacccaggccatccgc
atcttttcctga
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integrated database retrieval system
