Rissa tridactyla (black-legged kittiwake): 128915476
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Entry
128915476 CDS
T09443
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog isoform X1
KO
K14004
protein transport protein SEC13
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03013
Nucleocytoplasmic transport
rtd04141
Protein processing in endoplasmic reticulum
rtd04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128915476 (SEC13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128915476 (SEC13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
128915476 (SEC13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128915476 (SEC13)
04131 Membrane trafficking [BR:
rtd04131
]
128915476 (SEC13)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128915476 (SEC13)
Membrane trafficking [BR:
rtd04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
128915476 (SEC13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
128915476 (SEC13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
128915476 (SEC13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EIPR1
WD40_Gbeta
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_NOL10_N
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
NBCH_WD40
WD40_RFWD3
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
128915476
NCBI-ProteinID:
XP_054071798
LinkDB
All DBs
Position
10:complement(16198686..16204979)
Genome browser
AA seq
320 aa
AA seq
DB search
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLSYTGDGQWEVKKISNAHTIGCNAVSWAPAVVPGSLIEQPSGQKPNYIK
RFASGGCDNLVKIWKEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVF
IWTCDDASGNSWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGLWACIS
DVNKGQGGVSAVTEGQQNEQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggtctcggtgatcaacacggtggatacctctcacgaggacatgatccacgatgcgcag
atggattactatggcactcggttagcgacctgctcttcagacagatctgtgaaaatcttt
gatgttcggaatggaggacaaatcctcattgcggacctgagagggcatgaaggtcccgtg
tggcaggttgcctgggctcatcccatgtatggcaatatcttggcttcctgttcctatgac
aggaaggttattatctggaaggaagaaaatggcacgtgggaaaagacgtacgagtacaca
gggcatgattcctcagtgaattctgtctgctgggcaccacacgactacggattgatcctg
gcctgcgggagctccgacggggccatttcgttactgagctacacgggtgatgggcagtgg
gaagtcaaaaagatcagcaatgcacatacgatcggatgtaatgcagttagctgggctcct
gctgttgtaccaggaagtcttatagaacaaccatctggtcaaaaaccaaactacatcaaa
agatttgcatctggtggctgtgacaaccttgtcaagatctggaaggaagaagatggtcag
tggaaagaagagcagaagctggaggcccacagtgactgggttcgagatgtagcctgggct
ccatccataggtttgcccacaagtaccatcgctagctgctcccaggatggcagagtgttt
atctggacatgtgatgatgcctctggaaattcctggtcaccaaagctgctgcacaagttc
aatgatgttgtctggcatgtgagttggtccattactgcaaacattcttgcagtgtctgga
ggagacaataaagtcacactgtggaaggaatcagtagacggactgtgggcatgtatcagt
gatgtcaacaagggccaaggaggggtgtccgccgttacagaggggcagcagaatgagcag
tga
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