KEGG   Rissa tridactyla (black-legged kittiwake): 128915476
Entry
128915476         CDS       T09443                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog isoform X1
  KO
K14004  protein transport protein SEC13
Organism
rtd  Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03013  Nucleocytoplasmic transport
rtd04141  Protein processing in endoplasmic reticulum
rtd04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:rtd00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    128915476 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    128915476 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    128915476 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rtd03019]
    128915476 (SEC13)
   04131 Membrane trafficking [BR:rtd04131]
    128915476 (SEC13)
Messenger RNA biogenesis [BR:rtd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     128915476 (SEC13)
Membrane trafficking [BR:rtd04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    128915476 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    128915476 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    128915476 (SEC13)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 MIOS_WD40
Other DBs
NCBI-GeneID: 128915476
NCBI-ProteinID: XP_054071798
LinkDB
Position
10:complement(16198686..16204979)
AA seq 320 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLSYTGDGQWEVKKISNAHTIGCNAVSWAPAVVPGSLIEQPSGQKPNYIK
RFASGGCDNLVKIWKEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVF
IWTCDDASGNSWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGLWACIS
DVNKGQGGVSAVTEGQQNEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtctcggtgatcaacacggtggatacctctcacgaggacatgatccacgatgcgcag
atggattactatggcactcggttagcgacctgctcttcagacagatctgtgaaaatcttt
gatgttcggaatggaggacaaatcctcattgcggacctgagagggcatgaaggtcccgtg
tggcaggttgcctgggctcatcccatgtatggcaatatcttggcttcctgttcctatgac
aggaaggttattatctggaaggaagaaaatggcacgtgggaaaagacgtacgagtacaca
gggcatgattcctcagtgaattctgtctgctgggcaccacacgactacggattgatcctg
gcctgcgggagctccgacggggccatttcgttactgagctacacgggtgatgggcagtgg
gaagtcaaaaagatcagcaatgcacatacgatcggatgtaatgcagttagctgggctcct
gctgttgtaccaggaagtcttatagaacaaccatctggtcaaaaaccaaactacatcaaa
agatttgcatctggtggctgtgacaaccttgtcaagatctggaaggaagaagatggtcag
tggaaagaagagcagaagctggaggcccacagtgactgggttcgagatgtagcctgggct
ccatccataggtttgcccacaagtaccatcgctagctgctcccaggatggcagagtgttt
atctggacatgtgatgatgcctctggaaattcctggtcaccaaagctgctgcacaagttc
aatgatgttgtctggcatgtgagttggtccattactgcaaacattcttgcagtgtctgga
ggagacaataaagtcacactgtggaaggaatcagtagacggactgtgggcatgtatcagt
gatgtcaacaagggccaaggaggggtgtccgccgttacagaggggcagcagaatgagcag
tga

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