Rissa tridactyla (black-legged kittiwake): 128915516
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Entry
128915516 CDS
T09443
Symbol
DCAF1
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rtd01001
]
128915516 (DCAF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128915516 (DCAF1)
Enzymes [BR:
rtd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
128915516 (DCAF1)
Protein kinases [BR:
rtd01001
]
Serine/threonine kinases: Other
Other
128915516 (DCAF1)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
128915516 (DCAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
ANAPC4_WD40
LisH
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
128915516
NCBI-ProteinID:
XP_054071874
LinkDB
All DBs
Position
10:complement(19508165..19560542)
Genome browser
AA seq
1505 aa
AA seq
DB search
MTSGSGHVDSKAELTALLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYATGLLGGAMENQDIAANYRDENSQLVALVLRRLR
ELQVTEMTTKQENKRPSPRKVPSDPLLPLDEEAVDMDYGEMAVDGEQEEVPGDMEISFHL
DSSHKTSSRVNSATKLDDGGLRKSKSGKQHERDGFRKAKQKLGFSASEPERMFVELSNSS
WSEMSPWVIGTNYTLYPLTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMYYIDLK
RTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYN
QDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGL
RRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRRYFEAHLAIKLEQVKQSL
QRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLMLQL
ISIACNWKTYYARNDTVRYALDVLAILTVVPKIQLQLAEPVDVLDEAGSTVSTVGISIIL
GVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQAPKSSEHTLA
KMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSS
CQIQQLMKEPVLQDKRSEHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRI
TFPEKELLLLIRNHLISKGLGETASVLTKEADLPMTAASHSSAFTPVAAAASPVTLPRTP
RIANGISARLSSHTSVGSTATSVHAQARPSASQGPLALPGPSYASSSPLIGRISFVRERP
SPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVA
TCPPFSLFTPHQCPEPKQRRQAPTNFTSRLTRRAAFPKYGGVDGGCFDRHLIFSRFRPIS
VFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPS
RDGSLLLTSATWSQPLSALWGMKSVFDMKHSFPDDHYVEFSKHSQDRVIGTKGDIAHIYD
IQTGNKLLTLFNPDLANNYKKNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMTISG
VFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRVVFNYTGTVMYGAMLQADDEDDLLEE
RMRSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDSKDCYLAVIENQGSMDAMNMDTVC
RLYEVGRQRLAEDEEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDENN
ENAGEDGENDFSPSDDEELANLLEEGDEGEDEDSDADEEVELILGDTDSSDNSDLEDDII
LSLNE
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaggatctgggcatgtggactccaaggctgagctcactgctttgcttgagcaa
tgggagaaagaacatggcagtggacaagacatggtccctattctcaccagaatgtctgag
ctgattgagaaggagactgaagagtaccgcaaaggggacccagacccatttgatgaccga
cacccaggtcgagcggacccagagtgcatgcttggtcacttactgaggatactcttcaag
aatgatgatttcatgaatgcgctagtgaacgcttatgtgatgacaagcagagaacctcca
ttaaacactgctgcctgccgccttcttctggatatcatgccgggactggaaacagctgtt
gtctttcaggaaaaggaaggcatagttgaaaatctctttaagtgggcacgagaggctgat
caacctctaaggacatacgcaacagggctattaggaggagccatggaaaaccaagatatt
gctgcaaattacagggatgagaactcacaattggtggctttggtgcttcgacggctacga
gagttacaggtcactgaaatgactacaaaacaagaaaacaagcgtcccagtcctcggaaa
gtgccgtcagatcctctgctgcctctagatgaagaggctgtggatatggattatggggaa
atggcagtagatggagagcaagaggaagttcccggtgatatggagatctcctttcatctt
gattcaagtcataagaccagtagcagagtaaattctgctacaaagctagatgatggggga
ctgagaaaaagcaaatcagggaaacagcatgaaagagacggcttccggaaggccaagcaa
aagctgggcttctccgcttcagaaccagagcggatgtttgttgaactgtccaacagcagc
tggtcagaaatgtccccgtgggtgattggcactaattatacgctttaccctttgactccc
gccatagagcagaggctaattcttcagtacctgactcccttaggggagtaccaagagcta
ctgcccatctttatgcaactgggatcaagggaactgatgatgtactacatcgatttgaag
cgaactaatgatgtgctgctcacttttgaagcccttaagcatttggcatcattgctgctg
cataacaagtttgcaacggagtttgttgctcatggaggagtgcaaaagttgttggagatt
cctcgtccttccatggcagcaacaggggtctccatgtgcttatattatttgtcttacaat
caagatgccatggagagggtgtgcatgcacccccataatgtgctttcggatgtagtaaac
tacaccttatggctaatggagtgctcccatgcctcaggctgctgccatgctaccatgttc
ttctccatttgcttctccttccgtgctgtcctggagctctttgacaggcatgacggcctt
cggcgtctggttaacctgataagcactcttgagatcttaaacctggaagaccaaggagcc
ctcttgagtgatgatgagatctttgccagtcgccagactgggaaacacacctgcatggcc
ttgcgtagatactttgaggctcaccttgctatcaaacttgaacaggtgaagcagtcgctc
cagcgcactgaaggtggcattcttgtccacccgcagcccccctacaaggcctgttcatat
actcatgagcagattgtagagatgatggagttcctgattgaatatggtccggcacagcta
tactgggagccagcagaggtttttctcaaattgtcttgcgtccaactcatgcttcagctc
atttcaatagcatgcaactggaagacgtactacgcaaggaatgacacagtacgatatgct
ttggatgtactagccatcctgactgtggttcctaaaatccagttgcagctggcagaacct
gtggatgtgttagatgaagctggatccactgtttccactgtgggtattagtatcatcctt
ggagttgctgagggtgaatttttcatccatgatgccgagattcagaaatcagcccttcag
atcatcatcaattgtgtatgtggcccagataaccggatctccagtattggcaaattcatc
tctggaactcctcggcgaaagcttcctcaggcccccaagagcagtgagcacacattagct
aagatgtggaatgtggtacagtccaacaatggcatcaaagtgctgctgtcattgctgtct
ataaagatgccgatcacagacgcagatcagatccgagcattagcctgcaaagccttggtg
gggctctcgcgcagcagtactgtccggcagattatcagcaagctccccctctttagcagc
tgtcaaattcagcagctgatgaaagagccggtgcttcaggacaaacgcagtgagcatgtg
aagttctgcaaatatgctgctgagctgatagagcgtgtctcggggaagccgttgctgatt
ggcacagatgtctctctggctcggttgcagaaagcggatgtggtggcccagtcaaggatc
acgtttcctgagaaggagttgctgctcctgattcggaaccatctcatctctaagggccta
ggagaaactgcatctgtccttactaaagaggctgacctacccatgactgcagcatctcat
tcatctgccttcacccctgttgcggctgctgcctctcctgtgaccctgcctcgcactcct
cgcatagctaacggcatctcagcccgtttgagtagccacacttctgtaggttccactgcc
acctctgtccatgctcaggcaaggccgtctgcatcccaaggtccacttgcccttccaggc
ccttcttacgccagcagctctcctctgattggcaggattagctttgtcagggagaggcca
tctccctgcaacggcagaaaaatcagagtgttgcgacaaaaatcggaccatggcgcctac
agccagagcccagctatcaaaaagcagctggacagacaccttccttccccacccacgctg
gacagtataatcacagagtaccttagggagcagcatgcccgctgcaagaaccctgttgcc
acctgtccccctttctctctctttactccccaccagtgtcctgagccaaaacagaggcgc
caagcgccaactaactttacctcacggctgacccgcagggcagcctttccgaagtacgga
ggggtggatggtggctgctttgatagacaccttatatttagcaggttccgtccgatttct
gtgttcagggaagcaaatgaggatgagagtggctttacctgttgcgcgttttctgcaaga
gaacgattcttaatgctgggtacttgcacagggcagttgaaactctataatgtattcagt
ggacaggaagaggccagttacaactgccataactctgccatcacgcaccttgagccatcc
agggatggatctttattgctgacatctgctacgtggagtcaacctctgtctgcattatgg
ggaatgaagtctgtctttgatatgaagcattccttccctgatgaccactatgtggagttc
agcaagcactctcaggacagggtcattggcacaaaaggagatattgcccatatctatgat
attcagactggcaacaagctattgactctgtttaacccagatcttgccaacaactacaag
aagaactgtgccacctttaaccccactgatgaccttgtcctaaatgatggtgtcctctgg
gatgttagatcggcacaagccatccacaagtttgacaaattcaacatgaccatcagtggt
gttttccaccccaatgggctagaggtcatagtcaacacagaaatttgggacctccgaact
ttccatttgttacacacagtacctgcattggatcaatgtcgtgtggtcttcaactatact
ggcacagttatgtatggagctatgttgcaggcagatgatgaagatgaccttctggaggag
agaatgagaagtccctttggctcttctttcaggacatttaatgcaactgattataagcct
atagcgacgatagatgtcaagcggaatatctttgacttgtgcacagacagcaaggactgc
tatctagctgtcattgagaatcaaggcagcatggatgccatgaacatggatacagtttgc
agactgtatgaagtgggcaggcagcgtttggcagaagatgaagaggatgaagaagaagat
caggaagaagaggagcaagaggaagaagatgatgatgaagatgatgatgatacagatgac
cttgatgaactagatacggaccagctgctggaggctgagctggaggaggatgagaacaat
gagaatgctggcgaggatggagaaaatgacttttctccgtctgatgatgaggagcttgcc
aacctcctggaagagggagatgagggtgaagatgaagattctgatgctgatgaggaagtt
gagctgattcttggagatactgacagctcagataactctgacttggaggacgacataatc
ctgtctctgaatgagtga
DBGET
integrated database retrieval system
