Rissa tridactyla (black-legged kittiwake): 128915529
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Entry
128915529 CDS
T09443
Name
(RefSeq) laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04510
Focal adhesion
rtd04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128915529
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128915529
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
Laminin_II
DUF745
CCDC144C
F5_F8_type_C
Tropomyosin
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
128915529
NCBI-ProteinID:
XP_054071937
LinkDB
All DBs
Position
10:5936637..5946871
Genome browser
AA seq
1778 aa
AA seq
DB search
MRSPGALLLLPLLAGLGGAQAPDPPQGCARGSCYPATGDLLVGRAPRLSATSTCGLRRPQ
PYCIVSHLQEEKKCFVCDSRQPYDARANANSHRIENVVTTFAPRPKKAWWQSENGVEHVS
IQLDLEAEFHFTHLIMTFKTFRPAAMLVERSADFGRSWKVYRYFAYDCATAFPHVPRGPP
RRIDDVVCESRYSDIEPSTEGEVIYRVLDPAIPIRDPYSPAIQNLLRVTNLRVNLTKLHT
LGDNLLDSRREIREKYYYALYELVMRGNCFCYGHASECAPLTGAPATTDGMVHGRCVCKH
HTQGLNCERCEDFYHDLPWRPAEGSSTNACRRCDCNEHSRRCHFDMAVYLATGNTSGAVC
DGCQHNTMGRRCHLCKPFYYKDPSKDLRDPAVCQACDCDPEGSLDGGLCDSADDPARGLI
AGQCRCKEHVAGPRCDRCKPGFFGLSAANPQGCQRCQCDPRGTVTEGSRCDPVSGECFCK
RLVTGRNCDQCLPEHWGLSHDLQGCRPCDCDVGGARNNLCTVETGQCQCRSHVVGRQCSQ
VEPGFYRINLDHYTYEAEDAQLHQGSVVEREPPTDHPASWTGTGFARMLEGGWVEFHVNN
VPFSTEYDVIIRYEPQHPEPWQEVRVRVLRPSPVSASSPCGNTIPADDQLSTSLPSGARY
VVLPQPICLERGVSYTLRLELGCATARQDPTASVLIDSLVLMPRYSSLEMFIAGDPSSME
RRQTFERYRCAQPFHAAGPSPVAEPCSSLLHSLSAILHDGALPCLCDPQGSLSAECQPQG
GQCRCKPNVMGRRCHRCSPGTFGFGPGGCRACQCSREGSVSTVCDSTTGQCSCREGAHGP
RCDRCQPGHWGFPACRPCQCNGHAEECDPQTGSCLRCRDHTDGERCQRCVAGHFGNPALG
SGQHCRPCPCPEGPSSLRHFAASCYQDSHSRQVVCHCSPGYTGPRCDECAPGYYGDPLQP
GGRCLPCQCHDNIDMTDPEACDRRTGHCLRCLYNTAGPHCAECQPGYYGDATRHSCRRCS
CNTLGTDPSTCGPQQCQCDGRSGQCHCLPHVEGQSCDRCSPNFWNLGSGQGCQPCACHPQ
HALTPACNQFTGQCSCRPGFGGRTCADCQEHHWGDPRQQCRACDCDPRGVASTQCHRSSG
HCDCRPGISGVRCDQCARGFAGAFPACQPCHPCFGDWDRVVQDLAARTRALAQRASLLQH
TGAAGAFEGTFRQLEESLATVRNVVATHNATAATAAHLTHATEGLRQQIGEATERLTRLE
GELTATQDANFNASHVLSAVDRGARALNHSLQDLEQRLHALKTSNFLGAYDSIRQSHGES
QEAERRADASTRTMPSPVSTSAATRRRTEQLLASRRDDFNRQNAASRRALMDLATRAQAL
SLHPLNEKVCGAAGDVPCAESPCGGAGCRDEDGGRRCGGLSCSGAVSTADSALDRARHAQ
EELRRAAGDVAQLSHKVAEAKGKADEARLQAQAALDKANQTRARVESSNKELRELISHVK
AFLSQEGADPESIEVVASRVLELSLPAAPAQIHHLAEEIKARVRSLATVDAILEQTAGDV
RQAGQLLQDAQRARSRAEGVRGTAEAVRQALDEAQRAQGMAEQALHHATSDIQHTERALG
TIQDQTASAEQQLAGAMGRIGLLDGQMDALKVKRANNSLAATRAQEAASVARDRAGEAKQ
VLEGPLRDRYRTAQELVQHRAQGARQAGSRAQQLRDEAAGLLQDAQGKLQRLRALEEAYE
RNERVLDAKAAQLGGLEARMREVLATINQQVQIYNTCQ
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atgcggagccccggcgccctcctgctgctgccgctgctggccgggctggggggggcccag
gcccccgaccccccccagggctgcgcccgcggcagctgctacccggccaccggggacctg
ctggtgggacgagccccccgcttgagtgccacctccacctgcgggctgcgccggccccag
ccctactgcatcgtcagccacctccaggaggagaagaagtgcttcgtctgcgactcgcgg
cagccctacgatgcccgcgccaacgccaacagccaccgcatcgagaatgtggtgaccacc
ttcgccccacgccccaagaaagcctggtggcagtcggagaatggcgtggagcatgtcagc
atccagctggacctggaggccgagttccacttcacccacctcatcatgaccttcaagacc
ttccgccccgcggccatgctggtggagcgctcagccgacttcgggcgcagctggaaggtc
taccgctacttcgcctacgactgtgccaccgccttcccccatgtcccccgtgggccccca
cgccgcattgatgacgttgtctgcgagtcccgctactctgacatcgagccctccaccgag
ggggaggtgatctaccgggtgctggaccccgccatccccatccgggacccctacagcccc
gccatccagaacctgctgcgcgtcaccaacctgcgcgtgaacctcaccaagctgcacacg
ctgggggacaacctgctggactcgcggcgggagatccgggagaagtactactacgcgctc
tacgagctggtgatgcgcgggaactgcttctgctacgggcacgcctccgagtgcgccccg
ctcaccggggccccggccaccaccgatggcatggtgcacgggcgctgcgtctgcaagcac
cacacgcaggggctgaactgcgagcgctgcgaggacttctaccacgacctgccctggcgc
ccggccgagggctccagcaccaacgcctgccgccgctgcgactgcaatgagcactcgcgg
cgatgccacttcgacatggccgtctacctggccacggggaacaccagcggggctgtgtgc
gatggctgccagcacaacaccatgggtcgccgctgccacctctgcaagcccttctactac
aaggaccccagcaaggacctgcgggaccccgcagtgtgccaagcctgcgactgtgacccc
gagggctctctggatggagggctgtgtgacagcgccgatgacccagcacgggggctgatt
gcggggcagtgccgctgcaaggagcacgtggctggtccccgctgcgaccgctgcaaaccg
ggcttctttggcctcagcgctgccaacccgcagggctgccaacggtgccagtgtgacccc
cgcggcacggtgactgagggcagccggtgtgaccctgtcagtggcgagtgcttctgcaag
aggctggtgaccgggcgcaactgcgaccagtgcctgcctgagcactggggactgagccac
gacctccagggttgccggccctgcgactgcgatgtgggaggtgcccgcaacaacctgtgc
accgtggagacggggcagtgccagtgccgcagccacgtggtgggacggcagtgcagccag
gtggagcctggtttctaccgcatcaacctggaccattacacctacgaggctgaggatgct
caactgcatcagggctcggtggtggagcgtgagccccccacggaccacccagcttcatgg
acgggaacaggctttgcccgcatgctggagggcggctgggtggagtttcatgtcaacaac
gtgcccttctccaccgagtatgatgtgatcatccgctatgagccccagcacccagagccc
tggcaggaggtgagggtgagggtgctgcgccccagccccgtctccgccagcagcccttgc
ggaaacaccatcccagctgatgaccagctctccaccagcctcccctctggtgccaggtac
gtggtgctgccccagcccatctgcctggagcgaggcgtctcctacaccctccgcctggag
ctgggctgtgccactgctcggcaggatcccaccgccagcgtgctcatcgattcgctggtg
ctcatgccccgttactcctcgctggagatgttcatcgcgggtgaccccagctccatggag
cgccggcagacctttgagcggtaccgctgcgcccagcccttccacgccgcggggccctcg
cccgtggctgagccctgctccagcctcctgcacagcctctcggccatcctgcacgacggg
gcgctgccctgcctctgcgacccccagggctcgctcagcgccgagtgccagccccagggt
gggcagtgccggtgcaaacccaacgtcatggggcggcgctgccaccgctgctccccggga
acctttggctttgggcctggtgggtgccgagcgtgccagtgcagcagggagggctcggtg
agcactgtctgcgacagcaccacaggacagtgctcctgccgcgagggtgcccacgggcca
cgctgcgaccgctgccagcccggccactggggcttccctgcctgccggccctgccagtgc
aacgggcatgctgaggagtgtgacccccagacgggcagctgcctgcgctgccgcgaccac
acggacggcgagaggtgccagaggtgtgtggctgggcattttgggaacccggcgctgggc
tccgggcagcactgccggccgtgcccctgtcccgaggggcccagcagcctccgccatttc
gccgcctcctgctaccaggacagccactcccggcaggtcgtctgccactgcagccctggg
tacacaggtccccgctgtgatgagtgtgcccccgggtactacggagacccgctgcagccc
ggcggacgctgcctgccctgccagtgccatgataacattgacatgacggacccggaggca
tgcgaccggcgcacgggacactgcctgcgctgcctctacaacacggcagggccccactgt
gccgagtgccagcccggctactatggggatgccacgcggcacagctgtaggcgttgctcc
tgcaacacgctgggcaccgaccccagcacctgcgggccccagcagtgccagtgtgatggg
cgcagcgggcagtgccactgcctgccccacgtggagggccagagctgcgaccgctgcagc
cccaacttctggaacctgggcagcgggcagggctgccagccctgtgcctgccacccccag
cacgccctgacacccgcctgcaaccagttcacagggcagtgctcgtgccggccaggcttc
gggggccggacctgtgctgactgccaggagcaccattggggcgatccgcggcagcaatgt
cgagcctgtgactgcgacccccgtggcgtcgccagcacccagtgccaccgcagcagcggc
cactgtgactgccgtcccggcatctccggagtccgctgtgaccagtgtgcccggggcttt
gccggcgctttccctgcctgccagccctgccacccctgcttcggcgactgggaccgggtg
gtgcaggacctggccgcccgtacccgggcactggcgcagcgggccagcctcctgcagcac
actggggccgccggcgccttcgagggcaccttccggcagctggaggagagcctggccacc
gtgcgtaacgtggtggctacccacaatgccaccgccgccactgctgcccacctgacgcat
gccacggaggggctgcggcagcagatcggggaggcaacagagaggctgacgcggctggag
ggggagctgacagccacccaggatgccaacttcaatgccagccacgtgctgagcgcggtg
gaccggggtgcccgtgccctcaaccacagcctgcaggacctggagcagcggctgcatgcc
ctcaagacctccaatttcctcggcgcctacgacagcatccgccagtcccacggggagtcg
caggaggctgagcgccgggcggacgcctccacccgcaccatgcccagccccgtcagcacc
tcagcagccacccggcgccgcactgagcagctcctggccagccgtcgggacgacttcaac
cgccaaaacgcggccagccggcgggcgctgatggacctggcaacgagggcgcaggcactg
agcctgcacccgctcaatgagaaggtctgcggtgcagcgggtgacgtgccctgtgccgag
agcccctgcgggggagccgggtgccgggatgaggacgggggacggcgctgcgggggtctg
agctgcagtggggctgtgtccacggctgacagcgcgctggaccgggcacgccatgcccag
gaggagctgcgtcgggctgctggcgatgtggcccagctctcccacaaggtggcagaggcc
aaggggaaggcggatgaggcccgtctgcaggcacaggcggctctggacaaggcaaaccag
accagggcccgcgtggagagctccaacaaggagctgcgggagctcatcagccacgtcaag
gccttcctgagccaggagggggctgaccccgagagcatcgaggtggtagccagccgggtg
ctggagctgtcgctccccgccgcgccggcacagatccaccacctggccgaggagatcaag
gcccgggtgcgcagcctggccaccgtggatgccatcctggagcagacggccggcgacgtg
cgccaggcaggacagctgctgcaggacgcccagcgggccaggtcgcgggcagagggtgta
cggggcacagccgaggcggtgcggcaggcgctggatgaggcgcagagagcccagggcatg
gccgagcaggcgctgcaccatgccaccagtgacatccagcataccgagagagccctcggc
acgatacaggaccagacggcgagcgcagagcagcagctggcgggcgccatggggcggatt
gggctcctagacggacagatggacgccctgaaggtgaaacgtgccaacaacagcctggcg
gccacacgtgcccaggaggcagccagtgttgcacgggaccgagctggcgaggccaagcag
gtgctggaggggccgctgcgggaccgttaccgaacggcgcaggagctggtgcagcaccgg
gcgcagggcgcacggcaggcgggcagtcgggcacagcagctgcgggatgaggccgctggt
ctgctgcaggatgcccagggcaagctgcagcggctgcgagccttggaggaggcgtatgag
cggaacgagcgggtgctggacgccaaagcggcgcagctgggtgggctggaggccaggatg
agggaggtgctggccaccatcaaccagcaggtccagatctacaacacctgccagtga
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