Rissa tridactyla (black-legged kittiwake): 128915584
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Entry
128915584 CDS
T09443
Name
(RefSeq) contactin-4 isoform X1
KO
K06762
contactin 4
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtd04515
]
128915584
Cell adhesion molecules [BR:
rtd04515
]
Immunoglobulin superfamily
Contactins
128915584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_5
Sp38
Ig_C17orf99
V-set_CD47
Pur_ac_phosph_N
C2-set_2
Tissue_fac
fn3_4
Motif
Other DBs
NCBI-GeneID:
128915584
NCBI-ProteinID:
XP_054072121
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All DBs
Position
10:13736649..14081905
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AA seq
1029 aa
AA seq
DB search
MRLLWELLVLQSFMVCLADDNTLHGPVFLQEPNSVIFPLDSEEKKVKLSCEVKGNPRPTI
GWKLNGTSIDIGMDYRYSVVEGNLLINNPNKTQDTGTYQCVATNPFGTIVSREAKLQFAY
LENFKTRMRSTVSVRQGQGMVLLCGPPPHSGELTYAWIFNEYPTFVHQDNRRFVSQETGN
LYIAKVEASDVGNYTCVVTNMVTNSRVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPSA
KGTTVKLECFALGNPVPTISWRRADGKQIPRKARRHRSSGLLEIPNFQQEDAGLYECVAE
NVRGKNVARGQLTFYAQPNWIQKISDAHVAIEESVVWECRASGRPKPSYRWLKDGEPLLP
QGRIQLEQGSLMITNVSLSDAGMYQCVAENRHGIIFASAELSVIAVGPDFSKTLLKKLTL
VKVGGEVIIECKPKASPRPTYSWKKGKDILRENERITVLDDGSLRIVNVTKSDAGSYTCV
ATNHFGTASSTGSLVVKDPTRVMVSPFSMDVTVGESIVLPCQVSHDHSLDIMFTWSFNGH
LIDFEKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPG
PPEAVTIDEITDTTAQLSWRPGADNHSPITMYVVQARTPFSVGWQAVSTVPEIIDGRTFT
ATVVGLNPWVEYEFRVVAANLIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVI
TWETVPEELQNGGGFGYVVAFRPYGTISWMQTVVASPDAARYVFRNETLPPFSPYEVKVG
VYNNKGEGSFSPVTVVYSAEEEPTRAPTTVLARSLSASDVEVSWAPPRENQHKGRIQGYE
VRCWRHDEKEENAKRIRTVGNQTSTKVTNLRGNTLYHLAVRAYNTAGTGPSSATVNVTTK
KPPPSQPPGNVIWNSSDSKIILNWDQVKALDNESEVRGYKVLYRWNRQSSTSVIETNKTS
VELSLPFDEDYIIEIKPFSDGGDGSSSEQIRIPKISNAYARGSGSSTSNACTLSAISTIM
ISLTARSSL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgctatgggaactgctcgtgctgcaatcattcatggtgtgccttgcagacgac
aacacactgcatgggccggttttccttcaggagcccaacagcgtgatcttccccttggat
tcagaggaaaagaaagtgaagctgagctgcgaagtaaaaggaaatcccagaccaaccatt
gggtggaagttaaatggaaccagtattgacattggtatggattaccgctacagcgtggtg
gaaggcaacctgttgatcaataatcccaataaaacccaagatactggaacataccagtgt
gtagcaacaaacccctttggaacaattgtcagcagagaagcaaagcttcagtttgcttat
cttgagaacttcaaaaccagaatgagaagcacggtgtccgtccgccagggccaggggatg
gtgttgctgtgtggaccaccgccacattctggagagctcacctacgcgtggatcttcaac
gagtaccccaccttcgtacaccaggacaatcgccgcttcgtttcccaagagactgggaat
ttgtacattgcaaaggtggaagcttcagacgtgggcaactacacgtgcgtggtgacaaac
atggtgaccaacagcagggtcctgggtccccccaccccgctcatccttcggaacgacggg
gtgatgggggagtacgagccgaaaatagaagtgcagttcccagaaacggttccatctgcg
aaaggaacaacagtgaaactggagtgctttgccttggggaacccagtccctacgattagc
tggaggagggcggatgggaagcagatacccagaaaagccaggagacacagatcgagtgga
cttcttgaaatcccaaattttcagcaagaagatgctgggctctacgagtgtgtagctgaa
aatgtgagagggaaaaatgtggcacgaggacaactgacattttatgctcagcccaactgg
attcagaaaatcagtgatgcccatgtggccatcgaggagagtgtcgtctgggaatgccgg
gccagtgggagacccaaaccctcctaccgctggctgaaggacggggagccactgctgccc
cagggcagaattcagctagagcagggctcgctcatgataacgaacgtcagcctgtcggac
gccggcatgtatcagtgtgtagcagaaaacagacatggcatcatttttgccagcgcagaa
ctgagtgtcattgccgtcggtccagacttctccaaaacactgttgaagaagttaactctt
gttaaagtgggtggtgaagtaatcattgagtgtaagccgaaagcttcccccagacctact
tattcttggaagaaaggaaaagacatcctaagagaaaatgagagaatcactgttttggat
gatgggagcctccggattgtcaacgtcaccaagtccgacgcagggagttacacctgcgtg
gcaacaaaccactttgggacggcaagcagcacgggcagtctggttgtgaaagatccaacc
agggttatggtgtcacctttcagcatggatgtcactgttggagaaagcattgtcttgccg
tgtcaggtatctcacgatcactcactagatatcatgtttacctggtcatttaatggacac
ctgatagactttgaaaaagatggggatcactttgaaagagttggagggcaggattcagct
ggtgatttgatgatcagaagcatccagctgaagcatgctgggaaatacgtctgcatggtg
caaacaagtgtggacaagctatcggctgctgcagacctgattgtaagaggtcccccaggt
ccaccagaagccgtgacgatagatgaaatcaccgacaccaccgcccagctgtcctggagg
ccaggagcagacaaccacagccctatcacaatgtatgtcgtacaagcaaggacccccttc
tcagtgggctggcaagcggtgagcacagttccagagatcatcgatggcaggaccttcaca
gcgacggtggtgggtctgaacccatgggtcgagtacgaatttcgagtagtggctgccaac
ctgattgggattggagaacccagcagaccctcagagaagagaagaactgaagaagctctt
cccgaagtgaccccagctaacgtcagtggtggcggagggagcaagtctgagctggtcatt
acttgggagaccgtgcctgaggagctgcagaatggaggcggcttcgggtatgtggtggcc
ttccgcccctacgggaccatcagctggatgcagaccgtcgtggcctccccggacgccgcc
agatatgtcttccgcaacgagaccttgccgcccttctccccctacgaagtcaaagtgggg
gtgtacaacaacaagggggaagggtccttcagccccgtgaccgttgtctactcggcagag
gaagagccgacgagagccccgaccactgttttggccagaagtctttctgcctcagatgtt
gaagtttcttgggctccccctcgggagaaccagcacaaaggaagaatacagggatatgag
gtcaggtgttggagacacgacgaaaaggaagaaaatgcaaaaaggattcgaacagttggc
aatcaaacgtccacaaaagtcaccaacctgaggggcaacacgctgtatcacttggcagtc
agagcgtacaacacggctggcactggcccctccagcgccaccgtcaacgtcacaaccaag
aagccaccaccaagtcagccccccgggaatgtcatatggaattcgtccgactccaagatc
atactgaactgggaccaagtgaaagcgctggacaacgagtcagaagtgagaggctacaag
gttttgtaccggtggaacaggcagagcagcacgtccgtgatagaaacgaataaaacctcg
gtggagctctccctgccgttcgacgaggactacatcatagagatcaagcccttcagcgac
gggggcgacggcagcagcagcgaacaaatccgaattccaaagatatcaaacgcatacgcg
agaggatccggctcttccacctccaacgcctgtacactgtcagccatcagcacgataatg
atctcgctcacagcccggtccagtttatga
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