Rissa tridactyla (black-legged kittiwake): 128915590
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Entry
128915590 CDS
T09443
Symbol
NISCH
Name
(RefSeq) nischarin isoform X1
KO
K24095
nischarin
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtd04990
]
128915590 (NISCH)
Domain-containing proteins not elsewhere classified [BR:
rtd04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
128915590 (NISCH)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_4
PX
LRR_8
LRR_9
LRR_NXF1-5
LRR_14
PH_PLEKHM2
Motif
Other DBs
NCBI-GeneID:
128915590
NCBI-ProteinID:
XP_054072144
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All DBs
Position
10:17709525..17742239
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AA seq
1419 aa
AA seq
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MEAAAGGEDGEEPPREARVVGSELVETYTVYVIQVSVGNYQWTVKHRYSDFHDLHEKLVS
EKKIDKNLLPPKKIIGKNSKSLVEKRQKELEVYLQTLLVKFPITAPKVLSHFLHFHLYEI
NGITAALAEELFHKGEQLLMAGEVFTIRPLQLYAVTQQLLQGKPTCANGDAKTDLGHILD
FTCRLKYLKVTGTGGPFGTSNIQEHLLPFDLSIFKSLHQIEISHCGGKLIKGLTSSKHTL
ATMSIRFSATSMKEILVPEASEFDQWEPEGATSSCPVTAVIPTWRTLTTLDMSHNSISQI
DDSVKLIPKIEFLDLSHNGVSLVENLQHLYNLVHLDLSYNKLTSLEGVHTKLGNIKTLNL
AGNQLERLCGLNKLYSLVNLDLSNNKIEQIDEVKNIGNLPCLEKVVLSSNPLSIIPDYRT
KVLAQFGDRASEVCLDNIGTTEKELDTVEVLKAIQKAKEVKYKLSNSDKKISEDSRLTAA
SSKSNCSSLTVRPSSPSLPRPVSSSQEIICEETVLASSFLQSSGSTPTDHTVPQRCFEIP
DSRCKNQAPVPLLDSCKKYGSGHHMCLNRSEEHCVVPDPCNTIILPFNCMSYTATNQDFI
QHLSALIVQTVQRSPPSFTENKGSPPGDSRTTDKEDGYFEMGLNEGDQTFEFSTPSDTQS
SDNIAVESVDIVKILWSFSIHIHNGLRQFASCLVLTDDMLAVFEIPHQELRGNCQHISSA
LKLTLCFPYTDLTEFGFLLPEICLTLKLKNSENYLFIVSDSQNLQDFYSCLHACCSQHYT
SVLPSSTLYCGKANLQEFLCELMELNCISAEDVEIKGCFPTYLVCGNKTSVQKILHPPES
AGNNKERSKNVLCSALYSSVYKSSDQGPCVVHPCWIFLTPQYLYIVKVDFSLLPGKWVGT
EDLESVFKLNRIPLASLVLHPTHGSTQQKGSFSDGHVLELLVGYRIVTAVFVLPHEKFHF
LRIYGLLRTLLQDVKTIIIFKAANKPDAVRNHVVEADRHGQSASFCKPHLTLSSLYPSEF
LMQKITEDNQIPVHLRVSVSLQYVAGLKGNALVEFFHGNIAEVENEELRHLMWSSVLFYK
TPNVEVMACVLLSTKAIYFLLDDSFIHADEHQSDFWNKENSDCENSSFHLSCCFVLKLND
LQSVNVGLFDQYFRITGHSADHIVTCLTRDSYNTHTFIQQLMAVLSLLARTPSPEPVDKD
FYSEFGSKNTGKMENYELIHSSRVKFIYPNEEEIGDLAFLVAEKMDGLTNLQSLNILLYV
LAFQVNHVEGSAQNTSSLQPKTLILTSSDLFLFDEDYISYPLPEFAKEPPKRDKYQLVDG
RRIRDLDRVLMGYQTYPQALTFVFDDVQNQDLMQNLTLDHFGETDSAPKGNAKQEGSRSR
EIQWYIFIPSAESREKLISLLARQWEILCGRELPLELTG
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggcggcggggggcgaagacggcgaggaacccccgcgggaggcccgcgtcgtg
ggttccgagctggtggagacctacacggtatacgttattcaggtcagtgttggcaattat
cagtggacagtcaaacatcgttacagtgatttccatgacttgcatgaaaagcttgtttca
gaaaagaaaatagataaaaatctgttacctcccaagaagattattggaaaaaattccaaa
agcctggtggagaaaagacagaaggaattagaggtctacctgcaaaccctgctagtcaag
ttccccattacagctccaaaagttttgtcacacttcctacactttcatttatatgagatc
aatgggatcactgctgcgttggctgaagagctcttccacaaaggagagcagttattaatg
gctggggaagtcttcaccatcagacccttgcagttatatgctgtcactcaacagttgcta
caggggaagcctacatgtgctaatggagatgccaaaacagatctaggtcatattctagac
ttcacttgtagactcaagtatttaaaggtcactggaacagggggaccttttggaaccagt
aacattcaggagcatctcttgccctttgatctgtcaattttcaaatcgcttcatcaaata
gagatcagtcattgtgggggaaagcttatcaaagggctgacttcatcaaaacatactctg
gccacaatgagtattcgattttcggcaacatcaatgaaggaaatcctagtgcctgaggcc
tctgagtttgaccagtgggagccagagggtgcaacttcgagttgtccagtgacagcagtt
atcccaacatggagaactttaacaactttggatatgagtcacaatagcatctctcaaatt
gatgattcagtgaaattaattccgaagattgaattcctggatttgagtcacaatggggtg
tctctggtagaaaatttacagcatctctacaaccttgttcacctggacttatcctacaac
aagcttacatcactagaaggtgttcacacaaaactgggaaacatcaaaactctgaattta
gcaggaaatcagctggaaaggctgtgtggtcttaacaaactgtactcattagtcaacttg
gatctgagcaacaacaaaatagaacagattgatgaagtgaaaaatataggaaacctccca
tgcttagaaaaggtggttttatccagcaatccattgagcatcatccctgattaccggacc
aaagtacttgctcagtttggggacagggcctcagaggtctgtttggataatattggtacc
acagaaaaggaactagacactgtggaagtgctaaaagctattcaaaaagcaaaggaggtg
aaatacaagctgagcaactctgataaaaagatcagtgaggactccaggctcactgccgcc
agctccaaatcaaactgttcttctcttactgttcgtccttcctctccctctctgcctcgt
cctgtcagctccagccaagaaataatttgtgaagaaacagtcctagccagcagttttttg
caatccagtggttcgactcctacagaccatacagttccccagagatgctttgaaatacca
gactccagatgtaaaaatcaggcacctgtgcctctactggattcatgcaaaaagtatgga
agtggtcatcatatgtgtttgaatcgttcagaagaacactgtgtggtgcctgacccctgt
aacaccatcatcttgccttttaattgtatgtcatacactgccacaaaccaagattttatc
cagcacctttctgccttgatagtgcagactgtgcagagatcgcccccctcctttacagag
aataaaggaagccctcccggtgattccagaaccacagacaaagaagatggatattttgaa
atgggacttaatgaaggagatcagacttttgagttcagcactccttcagatactcagtca
tctgacaacatagcagtcgagagtgttgacatagtcaaaattctctggagtttttctatt
cacattcataacggactcaggcagtttgcttcctgtttggttttgactgatgacatgcta
gctgtgtttgagattcctcatcaggaattgagaggaaattgccagcacatctcttctgcc
ttgaaattaacgctgtgttttccgtatactgatctaacagaatttggctttcttctgcca
gaaatctgtttaaccctgaagctgaaaaacagtgaaaactacttgtttattgtttcagac
tcccagaatcttcaagacttttattcttgtttacacgcatgttgctctcaacactacaca
tcagtgttaccaagctccacattgtactgtggaaaagcaaacctccaagagtttctctgt
gagcttatggaattgaattgcatttcagcagaagatgttgaaataaaaggttgtttccca
acctatcttgtttgtgggaataaaaccagtgttcagaaaatcttgcatccaccagagtca
gctggcaataacaaagaacggtcaaaaaatgttttgtgttctgcactttattcttcagtg
tataaatcttctgaccagggtccctgtgtggttcatccgtgttggatatttctgacaccc
cagtatttgtacatagtaaaggtggatttcagtttactgccaggtaaatgggtaggcaca
gaagacttggaaagtgtatttaagctgaataggattccgttagcatcacttgtgttgcat
ccaactcatggttccacccagcagaagggttcattttcggatgggcacgtgttggagttg
ctcgttggatacagaattgttacagcagtgtttgttctacctcatgagaaattccacttc
ctaagaatctacggtcttttaaggacactcctgcaggatgttaagactattattattttc
aaagctgcaaacaagccagatgctgtaagaaatcatgttgtggaggcagacagacatggt
cagtcagcaagcttttgcaagcctcatctgacactgtcatctttatatccatctgaattt
cttatgcagaagataacagaagataaccagattcctgttcaccttcgtgtttctgtgtct
ctgcagtatgtggctgggctgaaaggaaatgccctagttgagtttttccatggcaacatt
gcagaggtggaaaacgaagagttgagacatcttatgtggtcttcagttctgttttacaag
actcccaatgtggaagtgatggcttgtgtgcttctgtcaacaaaagctatttactttctg
ttggatgattctttcattcatgctgatgagcaccagtcagatttttggaacaaagaaaac
tcagattgtgaaaatagttctttccacctctcttgctgctttgtgctaaaacttaacgac
ctgcagtcagtaaatgttggcctgtttgaccaatacttccgaattactggacactctgca
gatcatatagtcacctgcctgacaagagacagttacaacactcacaccttcatacagcag
cttatggcagttctgtcactgcttgcacgcacaccttcacctgaaccagtagataaagac
ttctactctgaatttgggagtaagaacacgggaaaaatggagaattatgaactgattcac
tctagcagagtaaaatttatttatccaaatgaagaggaaattggggaccttgcttttcta
gtggcagagaagatggatggtttgactaatcttcagtccctcaacatccttctgtatgtg
ttggcatttcaagtaaatcatgttgaaggatctgcccaaaacactagttcgcttcaacct
aaaacacttatattaaccagctctgatttgttcctctttgatgaagattatatcagttac
ccactacctgaatttgcgaaggaaccaccaaagagagataagtatcagcttgtagatgga
agacgaatccgggatttagatagagtactgatgggttatcaaacatatccgcaggccctt
acgtttgtgtttgatgatgttcagaatcaggatctgatgcagaatttaacactggatcac
tttggagaaaccgatagtgccccaaagggaaatgctaaacaagaaggcagcaggagcaga
gagatccagtggtacatctttatcccaagtgcagaaagcagggagaaattaatttcatta
cttgcaagacagtgggagatcttgtgtggtagggaactgcctttggaactcactgggtaa
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