Rissa tridactyla (black-legged kittiwake): 128915597
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Entry
128915597 CDS
T09443
Symbol
SHQ1
Name
(RefSeq) protein SHQ1 homolog isoform X1
KO
K14764
protein SHQ1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtd03009
]
128915597 (SHQ1)
Ribosome biogenesis [BR:
rtd03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
128915597 (SHQ1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
PIH1_CS
Motif
Other DBs
NCBI-GeneID:
128915597
NCBI-ProteinID:
XP_054072158
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Position
10:complement(12011372..12066130)
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AA seq
646 aa
AA seq
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MITPAFELTQDPDFLTIVIKVPYARGSEFDVYFEGEDFKFYAKPYFLRLTLPGRTVEDGR
EKASYNTDKGTFTIRLPKEIPGQYFEGLDMLTSLLAPKKSRSGKPLVEEIDTAASAELSE
EEEEEFDWEIEQTPYEESAESMLPLQYCYGFGNLRSGVFQRLQDELSDVIDIKAPDQTPV
DERRRKRLAAEAAKFDPDHYLADFFEDEAIQHVLMYKPWWVDVHKKMTAFKGESHQEHDN
HTFVVYVMVLQRVCILEEENFSLVRFMNFTRSFFAFYLEVVFSEEEKEQLRKLTNKSYLL
DKRSRHHVYLGLTDILLAYCYEICVNEGDKNVESAWNIRKLSATLCWLESFTSIHDVLVS
FGRRVLCYPLHRHFGLVTRAFNDTVMILQLGKAAVLKCLLDIHKIFRENDPAYILNDLFI
TDYCIWIQKTKSKKLAALSESLQKTTLTKSHIGFELEELEAAAVLVEEEERMLKAAGTVS
KQQLPSSESETSESEESSSTSSSETEGSDSDERESSTSEDGKINSLQGTLQEERTAPLID
CNGLRQGTNTSTFEVSDEKPKVSLQSTSVPGKLIEELEKQMHTAIRLSEQPEGLAAASCI
LQEQEENRVSKPDGFSKDTTGKGDFLEVSSKANPLLLFCSTNEDED
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgatcactccagcttttgagctgacccaggatccggattttcttacaatagtaatcaaa
gtaccttatgccagaggttcagagttcgatgtgtattttgaaggggaagattttaaattt
tatgctaagccatactttctcagactaacacttcctggaagaactgtagaagatggcaga
gaaaaagcatcttataatacggacaaaggaacttttacaattcggttacctaaggagatt
cctggccaatattttgagggactggacatgctgacatctcttttagcaccaaagaaatca
agatcaggaaaacctttagtagaagagatagatacagctgcttctgctgagttgtctgag
gaggaagaagaagaatttgactgggaaatagagcagaccccttatgaagaaagtgcagaa
agcatgctaccactacagtactgttacggctttgggaatttgcggtcaggagtgttccag
cggctgcaggatgaactcagtgatgttattgacattaaggctccagaccagactcctgta
gatgaacgtaggaggaaacgcctggcagctgaggctgccaagtttgaccctgatcattac
ctagctgatttttttgaagatgaagctattcagcatgtcttaatgtacaaaccatggtgg
gttgatgttcataaaaaaatgacagcctttaagggagaaagtcatcaggaacacgacaat
catacatttgttgtgtatgttatggtgcttcagagagtttgcattttagaggaagaaaac
ttttctctcgtacgtttcatgaacttcactaggagtttctttgctttctacttagaagtt
gtcttctctgaggaagagaaagagcagctgagaaagctcacaaataaatcttatcttctg
gataaaagaagccgtcatcatgtatatcttggtttaactgatatccttctggcatactgc
tatgaaatctgtgtcaatgaaggagacaagaatgttgaatcagcctggaacatcaggaaa
ctgagtgcaacgttgtgctggctggagagtttcactagcattcatgacgtcctggtatct
tttggaagaagagtgttatgctatcccttacacagacattttggattagtgacacgtgcc
ttcaatgatacagtcatgatactgcaactaggaaaagctgcagttctgaagtgtctgctg
gatattcacaagatttttagggagaatgaccctgcctacatccttaatgatctcttcatt
acagactattgcatctggattcaaaaaaccaagtcaaaaaagttggctgcactctctgaa
tccttgcagaaaaccacactcactaagtcccacataggatttgaactggaagagctggaa
gcagcagcagtgctggtagaagaggaagagcgcatgttaaaagctgctggcacagtttcc
aagcaacagctgccgtcctctgagtcggagacaagtgagtctgaagaatcaagcagtact
tcatcatctgagacagaaggctctgattcagatgagcgggagtcctcaaccagtgaagat
gggaaaataaattctttacaaggcacacttcaagaggagaggacagctccacttattgac
tgtaatggattaaggcagggcacaaacacttcgacgtttgaggttagtgatgaaaaacca
aaggtttctttgcaatctacatctgttcctggaaaattgatagaagaattagaaaagcaa
atgcacactgcaattagactttcagaacagcctgaaggattggctgctgcaagctgcatt
ttgcaggaacaagaagaaaaccgtgtatctaaacccgatggattttcaaaagatactact
gggaagggagatttcttggaggtgtcttcaaaggcaaacccattgcttttattttgcagc
acaaatgaagatgaagactaa
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