Rissa tridactyla (black-legged kittiwake): 128915641
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Entry
128915641 CDS
T09443
Symbol
TRAIP
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128915641 (TRAIP)
Enzymes [BR:
rtd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128915641 (TRAIP)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128915641 (TRAIP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-rbx1
zf-RING_11
zf-C3HC4_3
zf-C3HC4_4
zf-RING_Vps41
zf-ANAPC11
T3SSipB
RINGv
Latarcin
Crescentin
zf-RING_16
zf_RING_Vps8
zf-RING-like
EXOC6_Sec15_N
Prok-RING_1
DUF5305
zf-Nse
HIP1_clath_bdg
FANCL_C
RING_XB3-XBAT31
zf_RING_Vps8_fungal
WEMBL
Prok-RING_4
HMMR_N
Laminin_II
zf-UDP
zf-RING_4
GAS
Motif
Other DBs
NCBI-GeneID:
128915641
NCBI-ProteinID:
XP_054072283
LinkDB
All DBs
Position
10:19775761..19796883
Genome browser
AA seq
465 aa
AA seq
DB search
MPIRAHCTICSDFFDNERDVAAVPCGHTFHRTCLTQWFDTAPSRTCPQCRIQVSKRHIIN
KLFFDVALEEQTAPDAETLQNELDKVKAQLSMKEKEKRECQAVVDGLRDTLDVRNATIES
LQKVLGETEMLCSSLKKQMKFLEQQQEDNRSSKEEARRLRNKLRSMERIELLLQSQRPEV
EEMIREMGVGQAAVEQLAIYCVSLKKEYENLKEARKISSEMTEKLKKELFSVNNKLQKTV
SELEKTNEELKSTQKDLKNADKEILSLKKKIDILQDTLKVPSVTRETLSRLVFESPTPVE
LRHPKLHCPAHSDEINLDATFDVDTPEHQPCRSLFNPAKRQKLDKKPPPVVNLAKKVLKE
TVENWADDLEADALKGLLPTYIRNSVLAKKPSSGSLLGPHKNTGTVRMGYDGLGGRTKFI
QPTNLSEIRPLAVRSKKKNVSRPASAAPSASSSSSSQARLDSFLQ
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcccatccgcgcccactgcactatctgctccgacttcttcgacaacgaacgggacgtg
gcggccgtaccctgcgggcacaccttccaccgcacctgtctcacccagtggtttgacaca
gcaccaagccgcacctgcccgcagtgcagaatccaggtcagcaaaagacacatcatcaat
aagttgttttttgatgttgccttggaggagcagacggcaccagatgcagagactttgcag
aacgaactggacaaggtgaaggctcagctctccatgaaagagaaagaaaagcgggaatgc
caggctgttgtggatgggctgagggacacactggatgtgcgcaatgccacaatagaatcg
ctccagaaggtgctgggagagacagagatgctgtgctcctctctcaagaagcagatgaaa
ttcctggagcagcagcaggaggataacagaagttcaaaggaagaggcccgccgtctgcga
aacaagctgagaagcatggagcggattgagctgttgcttcagagccagcgccccgaagtg
gaggagatgatcagagagatgggagttgggcaggcagcagtggaacagcttgcgatctac
tgcgtctcgctgaaaaaggaatatgaaaacttgaaggaggctcggaagatctctagtgag
atgacagagaagctgaagaaggagctgttttctgtcaataacaagctgcagaaaacggtt
tcagagttggagaagacaaacgaggagttaaaaagcacccagaaggatctgaagaatgcg
gacaaggagatattgagtttgaagaagaagatagacatcctgcaggatactctgaaggtc
ccatctgtaaccagagagacactcagtcgacttgtctttgaaagccccactcccgtggaa
ctgcggcacccgaagctccactgcccagcccacagtgatgagatcaatctggatgccact
tttgatgtggacacccctgagcatcagccctgcagatcgctcttcaaccctgcaaaaagg
cagaagctggataaaaagccgcctcctgtggtaaatctggcgaagaaagttttgaaggaa
acggtggagaactgggcagatgatctggaggctgatgctcttaaaggactcctgccaaca
tacatcaggaactctgttctcgccaagaagccatcttcgggtagcttgctgggtccccac
aagaacacgggcactgtgaggatggggtatgatggcttgggcggcagaacaaagttcata
cagcctacaaacctgtcagaaatccgtccgttagcagtgaggagcaagaagaagaatgtc
tccaggccagcgtctgcagctccctccgcatcttcctccagcagcagccaagccagactg
gacagtttcctgcagtga
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