Rissa tridactyla (black-legged kittiwake): 128915662
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Entry
128915662 CDS
T09443
Symbol
RRP9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
KO
K14793
ribosomal RNA-processing protein 9
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtd03009
]
128915662 (RRP9)
Ribosome biogenesis [BR:
rtd03009
]
Eukaryotic type
90S particles
Other 90S particles
128915662 (RRP9)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_IP5PC_F
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WDR54
WD40_RFWD3
Beta-prop_LRRK2
WD40_like
Motif
Other DBs
NCBI-GeneID:
128915662
NCBI-ProteinID:
XP_054072327
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All DBs
Position
10:118334..122187
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AA seq
482 aa
AA seq
DB search
MAAAGGRRAKAKGVAAGRRRPRATVPGAEGRPRAAAGRPVDEEVSSDSETEIPSLGRRRQ
EAAAAEEEIDETPQEKKLRLAKQYLEELRQYEEERAAEEAEEEAAYPADLIGDRLREDVL
EQKGQLQRLVAKDVQPPDPASIRVLRGHQLPVTCLVISPDDRFIFSASKDGTVIKWEVES
GKRLCVVPGGKKGTEEQNMGHASHILCMAISSDGKYLATGDRNKLIMIWDTATCKRLHIF
TGHHDAVSGLSFRKGTHQLYSASHDRSVKVWDVAENAYVETLFGHQDVITGLDSLSRECC
VTAGGRDGTVRLWKIPEESQLVFYGHQGSIDCIQLINEEHMVSGADDGSVALWGLTKKKP
LALARQAHGMQDSQGLQEPYWISAVAPLRNSDLLATGSHNASVKLWKCSEGFRKLEPLWD
IPLVGFVNSLKFSSAGDFLVAGVGQEHRLGRWWRIKKAKNSVCIIPLRQRDAAPSPKAPD
GS
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgggcggcaggagggccaaggccaagggggtggcggcgggacggcggcgg
ccgcgggcgacggtcccgggagccgaggggaggccgcgggcggcggccggccggcccgtc
gatgaggaggtgtccagtgactccgaaacggagatcccgtcgttgggccggcggcggcag
gaggcggcggcggcggaggaggagatagacgagacgccgcaggagaagaagctgcgcctg
gccaagcagtacctggaggagctccgccagtacgaggaggagcgggcggcggaggaggcg
gaggaggaggcggcctacccggcggatctcatcggcgaccggctgagggaggacgtgctc
gagcagaagggccagctccagcgcctggtcgccaaagacgtgcagcctccggatccggcc
agcatccgcgtgctgcgggggcaccagctgcctgtcacctgcctggtcatctctccggat
gacaggttcatcttttctgcttccaaggatggcaccgtcatcaaatgggaggtggagagc
gggaagaggctgtgtgtggtacccggggggaagaagggcacggaggagcagaacatgggg
catgcatcccacatcctctgcatggccatctcatcggatggcaagtacctggctacagga
gaccggaacaagctgatcatgatctgggacacagccacatgcaagcgcctgcacatcttc
accgggcatcacgacgccgtctcaggcttgtccttccggaagggcacgcaccagctgtac
agtgcctcccacgaccgcagcgtcaaggtctgggatgtggcggagaatgcatacgtggag
accctgtttgggcaccaggatgtcatcacggggctggacagcctgagccgggagtgctgc
gtgacggcagggggacgggacggcaccgtgcggctctggaagatccctgaggagtcacag
ctcgtgttttacggccaccagggctccatcgactgtatccagctcatcaacgaggagcac
atggtgtcgggcgctgatgatgggtccgtagccctgtgggggctgacaaagaagaagcca
ctggcactggcccggcaggcccacggcatgcaggattcccagggcctgcaggagccatac
tggatctccgcggtggcccccctgcgcaacagtgacctcctggctacaggctcccacaat
gccagtgtgaagctctggaagtgcagcgagggatttcggaagctggagcccctctgggac
atccccttggtgggttttgtcaacagcctcaagttctcgtcagctggtgacttcctggtg
gctggggtcgggcaggagcaccggcttggccggtggtggagaatcaaaaaagccaaaaac
agcgtctgcatcatccccctgaggcagagggatgcagcccccagccccaaagcccccgat
ggctcctag
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