Rissa tridactyla (black-legged kittiwake): 128915824
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Entry
128915824 CDS
T09443
Symbol
TMF1
Name
(RefSeq) TATA element modulatory factor isoform X1
KO
K20286
TATA element modulatory factor
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128915824 (TMF1)
Membrane trafficking [BR:
rtd04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
128915824 (TMF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
ATG16
SlyX
Motif
Other DBs
NCBI-GeneID:
128915824
NCBI-ProteinID:
XP_054072599
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All DBs
Position
10:complement(10540666..10559295)
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AA seq
1105 aa
AA seq
DB search
MSWFNASQLSSFAKQALSQAQKSIDRVLDIQAEESPWPDAVIPDYGDGTNSLISGGWDTS
SWGLSSNTEPQNQPISPTAITKPVRRTVVDESENFFSAFLSPTDVQSIQKNPVVSKPPAK
SQRPKEEVKSTLKESQHPSQLEVPVTEAEVKDSSVAGLVDLKNLDIPKEKLEEKSVLKSN
AKHEESTNEVTDKKVSALNLEVPEDALNEKSGVGGGVTGGASETTSQPLHAGTKDVGLET
KERKTEDRQSNTPSPPVSTFSSGTSTTSDIEVLDHESVISESSVSSRQEAADSKSSLHLM
QTSFQLLSASACADYNRLDDFQKMTESCCSSDAFERIDSFSVQSLDSRSVSEINSDDELS
GRASASASVAVSPSVPKTEMVDAPKNKSENLNDTPVLHAEEAEMEESGRSATPVNSEQPD
VLVATVQTVEEQIAEEQTEPQQDAVEKLLEEDTEKQELKKMIDSLTEKLEKREIQLLSTS
KEKARLEEAYDNLKDEMFRMKEESSSLSSLKEEFAQRIADAEKKLQLACKERDAAKKEVK
TVKEELATRLNTNETAELLKEKEEQIKGLLEEGEKLSKQQLHNSNIIKKLRAKEKERENI
NTKQNKKIKELEEELQHLKQVLDGKEDLEKQHRDSIKQLNSVVERQEKDLAKFQAEVEDL
EERNRSVQAALDSAYKELADLHKANATKDSEAQEAALSREMKAKEELGLALEKAQDEARQ
QQEALAIQVADLRLALQRAEQQAARKEDYLRQEIGELQQRLQEAESRNQELSQSVTSATR
PLLRQIENLQATLGAQTSAWEKLEKNLSDRLGESQTLLAAAAERERAATEELLSNKIQMS
STESQNSLLRQENTRLQAQLEVERNKLKKMEDENSRYEVELEGLKDEYAKTLEDAKKEKT
LLATQLEMEKMKVEQERKKAVFMQEAAKEKDRKSFTVETVSSTPTMSRSSSISGVDMAGL
QTSFLSQDDPHDHSFGPIATSGSNLYDAIRMGAGSSIIENLQSQLKLREGEISHLQLEIG
NLEKTRSIMAEELVKLTNQNDELEEKVKEIPKLRAQLKDLDQRYNTILQMYGEKAEEAEE
LRLDLEDVKNMYKTQIDELLKQRQN
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttcaacgcctcgcagctctccagcttcgccaagcaggcgctgtcgcaggcc
cagaagtccatcgaccgggtgctggacatccaggccgaggagagcccctggcccgacgcc
gtcatccccgactacggcgacggaacaaattccctcataagcggaggatgggatacgtct
tcctggggcttaagttcgaatacagaaccacagaatcagccaatatcaccaacagcaatc
actaagccagtgaggaggacggtagtagatgaatctgaaaacttcttcagtgcctttctc
tctccgacagacgttcagagtatacagaaaaatccagtcgtgtccaaacctccagccaaa
tcacagcgacccaaagaggaggtgaaaagcactttaaaggagtctcaacaccccagtcag
ctggaagtaccagtgacagaggcagaagtgaaggattcctctgtagctggcctggtggac
ttgaaaaacctcgatattcccaaggagaaattagaagagaaatctgtacttaaatctaat
gccaagcatgaagaaagcacaaatgaagttactgacaaaaaggtgtctgctctaaatctg
gaagtacctgaagatgctcttaatgaaaagtccggtgtaggagggggtgtaacgggaggt
gcatcggagactacttcacagcctcttcatgcaggcacaaaagatgtgggtttggaaact
aaggagcgaaagactgaggacaggcaaagcaatacaccatcacctccagttagcactttc
tcctccgggacatctacaactagtgatattgaagttctggaccatgaaagtgtaataagt
gagagctcagtaagttcaagacaagaagccgcagattcaaaatccagtcttcatctaatg
caaacatcatttcagcttttatctgcatctgcctgtgcagattataatcgtttagatgac
tttcaaaaaatgaccgagagctgctgctcctctgatgcttttgaaagaattgattcattt
agtgtacagtctttagatagtagaagtgtaagcgaaataaattcagatgatgagttatca
ggcagagcttctgcttcagcgtctgttgctgtcagtccttctgtgccaaagacagaaatg
gttgatgccccgaaaaataaatctgaaaacttgaatgacactcctgttttacatgctgag
gaagctgagatggaagagagtgggagaagcgcgacccctgttaattctgagcagccagat
gttttggttgccactgtgcaaactgttgaagagcagattgcggaagagcagactgagccg
cagcaggatgctgttgaaaaattgttagaagaggacactgaaaagcaagagcttaaaaag
atgattgattcattaactgagaaactggagaagagggaaatacagttactaagtactagt
aaagaaaaggcgcgcctggaagaagcttatgataacctaaaagatgaaatgtttagaatg
aaagaagagagcagtagtctttcatctcttaaagaagagtttgctcagcgaattgcggat
gctgaaaagaagcttcagctagcctgcaaggaaagagatgcagctaaaaaggaagtaaag
actgttaaagaagaattggctactagacttaatactaatgaaactgccgaattactgaaa
gaaaaagaagagcaaatcaaaggattactggaggaaggagaaaagctttccaaacagcag
ctgcacaattccaacattattaagaaattaagagccaaggagaaagagagagaaaatatt
aacacaaaacagaacaaaaagattaaggaattggaagaggagttgcagcatttgaaacag
gtgctcgatggcaaggaagaccttgaaaagcaacatcgagacagcattaaacaactgaac
agtgttgtggagcgacaagaaaaggatctggctaaatttcaggcagaagtggaagacctt
gaagaacggaacagaagtgtccaggcagcacttgacagtgcatacaaggaacttgcggat
cttcataaagcaaatgctacaaaggacagtgaggcacaagaagcagccctaagtcgggaa
atgaaggcaaaggaagagcttgggttagctctggagaaagcccaggatgaagcgcggcag
caacaagaagctttggcaattcaggtggcagacctgaggctagcgctacaacgtgcagaa
cagcaggcagcaagaaaagaagactatttacgtcaagaaatcggtgaactacaacagaga
ctccaagaagcagagagccggaaccaagaactaagtcaaagcgttacgtctgctacacgg
ccacttctccggcagatagaaaatctgcaagccacactaggagctcagacctctgcgtgg
gaaaaattggaaaagaacctttctgacagacttggtgagtctcaaactcttctagcagcc
gctgctgagagagaacgggctgctacagaagaacttctttctaataaaattcagatgtct
tctactgagtctcagaacagtcttttaaggcaagaaaatacgcgccttcaggctcagcta
gaagtggagagaaacaaattgaagaaaatggaagatgaaaacagtaggtatgaggttgaa
ctagaagggctcaaagatgagtatgcaaaaaccttggaagatgcaaagaaagaaaagacg
ctgctagctactcagttagaaatggagaagatgaaagttgaacaggaaagaaagaaagca
gttttcatgcaagaagcagcaaaggagaaggatcggaagtcatttacagttgaaactgtt
tcaagtactccaactatgtcacgctctagttccataagtggagttgacatggcaggtctt
cagacatctttcctctcacaggatgatcctcatgatcactcatttgggccaattgctact
agtgggagcaatctttatgatgctataaggatgggagcaggttcaagtataattgaaaac
cttcagtcacagctaaaactaagagaaggagagatttcacatctacagctggaaattgga
aaccttgagaaaactcgatcaataatggcagaagaactggttaaattaacaaatcaaaat
gatgaacttgaagaaaaagtgaaggaaataccaaaattacgtgcacagttaaaggatttg
gatcaaaggtacaatacaattcttcagatgtatggagagaaagcagaggaagctgaagaa
ctccgactagatctcgaagatgtgaaaaacatgtacaaaactcagattgatgaactttta
aaacaaaggcaaaactaa
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