Rissa tridactyla (black-legged kittiwake): 128915840
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Entry
128915840 CDS
T09443
Symbol
STAB1
Name
(RefSeq) stabilin-1 isoform X1
KO
K19020
stabilin-1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128915840 (STAB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rtd00536
]
128915840 (STAB1)
Glycosaminoglycan binding proteins [BR:
rtd00536
]
Hyaluronan
Cell surface receptors
128915840 (STAB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
EGF_STAB1-2
cEGF
EGF_MSP1_1
FXa_inhibition
EGF_Teneurin
EGF_TEN
EGF
Motif
Other DBs
NCBI-GeneID:
128915840
NCBI-ProteinID:
XP_054072636
LinkDB
All DBs
Position
10:17749002..17810652
Genome browser
AA seq
2604 aa
AA seq
DB search
MKMHPPGLLFFFLAACFTPTADCQSQKLKSMRCNIKTMFTLNTACTACAIAHKTLCPRGW
LKTTKGLGVRDCRYTVKLGENTISQPGCHHICKKEIEEKKCCPGFWGTECYECPGGSQNP
CNGHGTCLDGMQQNGTCTCKEQYGGFACQDCQDENRFGPDCQSVCDCVHGECNSGVTGNG
SCTCYGGYTGPRCDQELPLCKGMTCEANSECVVRDGTAMCDCKLGYRKSGSTCQAQDPCA
SSPCSPFAVCKVLGPRKYQCTCKEGFQGDGKFCQPINPCVDNNGGCPENSTVCVYRRPGT
VSCVCKPGTSRRTPSSECSAFPNDCRQYFCDVTSTCEINSQGNPTCVCKEGEIGDGRSCY
KDLLSEINQYNSRGRFARKLNVARKMFASGCSMLLTKYGPLTVFVPSLLLVHDRMEFNDT
TAEDLCRMHIVPGLHLMEDMVKAKTMWTLSGHQLTFSSQTYVKSFRYQDLPGELYNVLQS
NLPASNGIMHIVNTLRKKTSTDNLRNPQKTIGEILASMEIFSRFETILENCGLPAILDGP
GPFTVFVPSNDGVDKLRDGRLIYLFTEGINKLQELVKHHIYASAAVTVEKLITMPHIVTM
ANQILTINISADGRILMDESGIPLNIRDIVASNGIIHTLDGIFIPPSIIPILPHRCNEEQ
HKIVTGSCVDCEALNNSVCPPGSREMEPMLSPKECVYTHDPQGLNVQKKGCARYCNQTIT
KPGCCKGFFGPDCMPCPGGFSSPCYGRGNCSDGIQGNGNCHCFEGFKGIACHICSNPNKH
GENCDEDCGCVHGVCDNRPGSGGVCQSWSCKEGYSGKFCDKTSKNCGPGGLSQYCHQHAV
CSLNDTARCICMDGYEGDGFSCQPIDLCSQPGRGGCSQNALCTTTGPGTATCQCNTGWTG
DGKVCVAIDNCMLESRGNCHINADCVYIGPGQSKCVCKRGYAGDGHNCDAINPCLMDNGG
CHDLAKCVPLGGGERSCACPQGFMGDGMTCYGDILKELDQNSHFAGFYEWLQKSLFSIPA
GTNVTVLVPSEAAIKNLSETEKDFWLTPYMLPFLVRAHFLEGVFTEEKLKTYDRPELPTL
NPPTRWQISTRSGVLTIQNASIVVSDIPASNGIIHVLSKVLFPPSGDIPSSPPGLQKQLE
TVASFSTFKELLEQYQLIGKIESSEKYTIFVPGNNSIEEYCLAANVTQLDKETVQYHVVL
GEKLLPMDLRSGIHKNSMLGLSYWLMFYQNSTQKFVNNIPLDGRFLETKNGMLIGVSQVL
QIQKNRCTANTTTIQKSRCGKCEKGIKCPPGSVLVEVPGSKNLARCELRSGDTEILGCHF
TCAKVSLRSVCCPGYYGHMCEMCPGKPGQWCSGNGECQDGIEGSGECRCLEGFHGTACEM
CEVGRYGADCKSECACDNGICNDGLQGDGSCECFPGWKGPTCQEIIEIDLCNNTCHQMAN
CLNSSADSPPTCSCSAGYTGNGTHCTEIDPCTINHGGCSVHAVCTKVSPGERTCVCKEGY
AGDGTLCMEIDLCLESNGGCHTNAECIKTGPRKVACNCLPGYSGDGVSQCNPINLCEQNN
GGCSPFGLCKYTGPGTRNCSCSWHSVGDGFTCHGKVYQELGRIEDASVFFKMILAENIKE
LSGAGPFTVFVPRTDFIGNTTTFEEWRSRGLLRDLLRYHMVGCQKLLSSDLEAQESLTSL
SGHKIKITEKENSIYLNEEAKVVVSDIVGVNGVIHFINKILIPSDLVDRNISSKISQLNI
TEVAEAFGYTIYSKLLQDAELLPLVSDPLHRPFTMLWPTDAVFNALSEKRQKWLYRREHR
DVLASYLKAHMIRDIKIVAGNVPQIKSIRTMHGSTISFSCSKTHVGELLVGNGDATIIQR
HMEFNGGIAYGIDRLLEPPDLGSRCDEFRFVELQGSTESCGLCGFEPPCPAGSVQQGGTR
RCYYYGNQLLRNTFLFHRNSLLRPPSPWDFRRHFSSRGPLKRGCKRNCVSTQWVPQCCAN
HYGRDCWVCPGGLEAPCSNRGTCDDKIGGSGRCNCSQAFIGTSCELCAPGRYGPDCRECN
CTENGVCNGGLHGDGFCFCAEGWTGDRCEIRLVMTPTCSPPCHPHAVCRSGNLCECNLHY
EGDGRTCSVIDMCSQDNGGCAKHAECTQVGVNVSCACAPGYGGDGYVCDPIDRCADGRNG
DCSEHANCISTGPNERHCECKQGYIGDGIQCLEEAVPPTDRCLEDNGRCHRQAICTDLHF
HDKTVGVFHLQSPRKKYDFTYEQAQKACAAEGASLATFQQLSAAQQMGFHLCLVGWLDNG
TAGYPTAYPSPSCGANRVGIMDYGPRSNLSETWDAFCYREKDVTCTCRDGFVGDGYWCSG
KLPDVLADHDRFSTFYSMLLDFANETEGGLDLFLYLSDDSAPKTLFVPLNSGFADNETLT
GEELKLHVSSSNIVLFSFNLTTGTIIPSQSGYDLHVSDLPAGNSTEHSDAKGINDTMIVE
WDIVAFNGIIHAIAEPLRIPPPIANLGQVNGVARAPGSVATGTLSALCFALVLAAAAGAA
YYCVKRRRREEQFGYFQADLREEEEEEEAEAAPQQERGAPRAARLRPQRPLVAIPNPLYG
GHAPDYEPLQDALLADADHRRSPP
NT seq
7815 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgcatcctcctgggttgctgtttttcttcttagcagcgtgtttcactcccaca
gctgactgccagagtcagaagttaaaatccatgcgatgcaatatcaagacgatgtttacc
ttgaatacagcgtgtactgcttgtgctatagcgcataaaacattgtgtccaagaggctgg
ttaaagaccaccaaaggattaggagtaagggactgcagatacactgtcaaattaggagag
aataccatttcccagccagggtgccatcacatatgtaaaaaagaaattgaggagaaaaag
tgctgtccaggattctggggtacggagtgctatgagtgtccgggtggctctcaaaatccc
tgcaatggccatgggacatgcttggatggtatgcagcaaaacgggacctgcacctgcaag
gagcaatatggtggttttgcctgccaggattgtcaagatgaaaatcgatttggcccagac
tgtcagtcagtgtgtgactgtgtgcatggggaatgcaacagtggcgtcactgggaatgga
agctgcacgtgctatggaggctacactggccccaggtgtgaccaagagcttcccctttgc
aaaggcatgacatgcgaggccaacagcgaatgtgtggtgagggatgggacagcaatgtgt
gactgcaagctgggctacagaaaaagtgggagcacttgccaagctcaggatccttgtgct
tcttctccatgctcacccttcgctgtgtgcaaggttcttggaccacgaaagtatcaatgt
acctgcaaagaaggatttcaaggagatgggaagttttgccagcccataaacccttgtgtt
gacaacaatggaggctgcccagaaaactctacagtttgcgtttacagacgtccaggaacg
gtatcttgtgtttgcaaacctgggacaagtaggagaactccttcgtccgagtgttctgca
tttcccaatgattgccggcagtatttctgcgacgtgacttccacatgtgaaattaattcc
cagggaaatcctacctgtgtctgtaaagaaggggagattggagatgggagaagttgctat
aaagatctcttgagtgagataaatcagtataattcacgaggaaggtttgctaggaaatta
aacgtcgccaggaaaatgtttgcttctggttgctcaatgttgctgactaaatacgggcct
ttgacagtctttgtaccatcccttcttctggttcatgatagaatggaatttaatgatacc
actgctgaggatttgtgcagaatgcacattgttcctggtctgcatttaatggaagacatg
gtaaaagccaagactatgtggacgttgtcaggacatcagctaacgttcagtagccagacg
tacgtcaaatcatttcgatatcaagacctgccgggggaactatacaatgttttgcagtcg
aacctaccagcatccaatggcatcatgcatattgttaacaccctaaggaaaaaaaccagc
actgacaatctcagaaacccacagaaaaccattggcgagatccttgcatcaatggagatc
ttcagtagatttgaaactatactggagaactgcggcctgcctgcaatactggacggacca
ggcccctttactgtatttgtacccagcaacgatggcgtggacaagctgagagatggaagg
ctcatttatcttttcacagagggcataaataagcttcaggaacttgtgaaacatcatatc
tacgcttcagcagcggtgactgtagagaaactgataacgatgccccacattgttactatg
gctaaccagatacttaccatcaacatcagtgctgatggaagaattctgatggatgaatca
gggatccccttaaacatacgggacattgtggcatcaaatggtattatccataccttggat
ggcatcttcatccctccttcaataattcccattttgcctcacagatgcaatgaagagcaa
cataaaattgtgacgggctcttgtgtggattgtgaggccctcaacaacagcgtttgccca
cctggcagcagagaaatggaaccaatgctctccccaaaagaatgtgtctacacccatgat
ccacaaggcctgaatgtccagaagaaggggtgcgccaggtactgcaatcaaaccatcacg
aaacctggatgctgcaaaggattctttggtccagactgcatgccatgcccagggggattt
tccagtccatgctatggccggggaaattgcagcgatggcatacaagggaatggcaactgt
cactgctttgaaggtttcaaaggaatagcctgccacatctgttcaaacccaaacaagcac
ggcgagaactgtgatgaagattgtggctgtgtccatggtgtctgtgacaacaggcctggc
agcggtggtgtgtgtcagtcctggtcctgtaaggaaggctatagcgggaaattctgtgac
aagacatccaagaactgtggcccgggcgggctgtcccagtactgccaccagcacgctgtc
tgcagcctcaatgacacggcaaggtgcatctgcatggatggatatgagggtgacggcttt
tcctgccagcccatcgacctgtgcagtcagccaggacgaggaggctgttcacagaatgcc
ctgtgcaccactacaggccccggcaccgccacctgccagtgcaacacaggctggaccggg
gacgggaaggtctgtgtggctatagacaactgcatgctggagagcagagggaactgtcac
atcaatgctgactgcgtttatatcggccctggccagagcaagtgtgtctgcaagaggggt
tatgctggcgatggccacaactgtgatgcaatcaacccatgcctcatggacaacggtggc
tgccatgacctggctaagtgtgtaccccttggaggaggagagagatcctgtgcttgccct
caaggcttcatgggggatggcatgacatgctatggggacattctaaaagagctggaccag
aattcccacttcgcaggcttctacgagtggcttcagaaatctctcttcagcatcccagca
ggaaccaatgtcaccgtcctggtgccatcggaggccgcgatcaaaaacttgagcgagact
gagaaagatttctggttgaccccctacatgctgccatttttagtcagggcccactttctg
gaaggcgtcttcactgaggaaaagctcaaaacatacgacaggccagaattacccaccctc
aacccaccgaccagatggcagataagcaccaggagtggcgtattaaccatccagaacgcg
agtattgttgtcagtgacatccctgccagcaatggcattattcatgtcctcagtaaggtt
ttgtttccaccttcaggagatatcccatcgagtcctccaggtctgcaaaagcaactcgag
acagttgcctcattcagcacattcaaggagttgctagagcaataccagctcattggaaaa
atcgagtcctctgaaaaatatacgatttttgttcctggaaataattccattgaggagtac
tgccttgctgccaatgtgacacagttggacaaggagacagtgcagtaccatgttgtactg
ggagagaagctcttgcccatggacttgagaagtggaatccataagaacagcatgttagga
ctctcctactggctaatgttttatcaaaacagcacccagaagtttgtcaataatattcct
ttggatggaagatttcttgagacaaagaatggcatgttgatcggcgtttcacaggtcctc
cagatacagaagaaccgttgcactgccaataccaccacaatacaaaagtcaagatgcggc
aagtgtgagaaggggatcaagtgtccacctggatcagttcttgtggaagtgccaggaagc
aagaatctcgctcgctgtgaattacgctctggggatacagaaatacttggctgccatttc
acctgtgcaaaagtttctctgagatccgtctgctgccccggctactacggacacatgtgc
gagatgtgcccagggaagccaggccagtggtgctccgggaacggggaatgccaggatggt
attgagggcagtggagagtgccgatgcctggagggtttccatggtactgcctgtgaaatg
tgtgaagtgggccgatacggagctgactgcaaatcagaatgtgcctgtgacaatggcata
tgtaacgatggactgcaaggggatgggagctgcgagtgtttcccaggatggaagggccct
acctgccaagaaataatcgagatcgacttatgcaataacacttgccatcaaatggccaac
tgcctcaatagttctgcagattccccacctacatgctcctgctctgctggatacacaggg
aatggaacccattgcacagaaatagatccgtgcactatcaatcacggtggctgctccgta
catgctgtgtgtactaaagtgtccccaggagagagaacctgtgtttgtaaggaaggctac
gctggagacgggacgctctgcatggaaattgatctctgtctcgaaagcaatgggggctgc
cacaccaatgcagagtgcattaaaacaggcccaaggaaggttgcctgcaactgtcttcct
ggttacagcggggatggcgtgagccaatgcaaccccatcaatttgtgtgaacagaacaac
ggaggctgtagtccatttgggctttgcaagtacacgggccctggcactcgaaactgctcc
tgctcttggcacagtgtcggagatggcttcacctgccatggcaaagtatatcaggagctc
ggaagaatcgaagatgcatccgtgttctttaagatgatactggcggaaaacatcaaggag
ctcagtggggcagggcctttcactgtctttgtcccacggacagatttcataggaaacacc
acgacatttgaggagtggaggagcagaggtctcctccgggacctgcttcgctaccacatg
gtgggttgccagaaattgctgtccagtgacctggaagcccaggagtcccttacatcttta
tctggccacaaaataaagatcacagagaaagagaatagcatctatctcaatgaggaagcc
aaagtggttgtgagtgacatcgttggcgtgaacggggtcattcatttcatcaacaagatc
ctcattccaagtgacctggtggaccgaaacatttcctcaaagatctcacagctaaacatc
acggaagtggcagaggcctttggatacaccatttatagcaagctgctgcaggacgctgag
ctgctgccactggttagtgaccctctgcacagacccttcaccatgctgtggcccacagat
gctgtgtttaacgccctctcggagaaaaggcagaagtggctgtaccgcagagagcatcgg
gatgtgctggcctcctacctcaaagcacacatgatcagggacataaagattgtggctggt
aacgtgccccaaatcaaatccatccggaccatgcatggctccaccatctcattcagctgc
agcaaaacccatgtgggtgagctcctggtggggaacggcgacgccaccatcatccagagg
cacatggaattcaatgggggcattgcttatggcattgataggctgttggagccaccggat
ctgggatctcgttgtgatgagttccgctttgttgagctgcagggatctacagagagctgc
ggactctgtggctttgagccaccctgccctgctggctctgttcaacaggggggaaccagg
cgctgctactattacggaaaccagctgttgagaaacacttttctgtttcaccgcaactcc
ctgttgcggccgccctccccgtgggacttcagaagacacttctcttccagggggcctctg
aaacgaggctgcaagaggaactgcgtttccacccagtgggtcccgcagtgctgtgcgaac
cactacggccgggactgttgggtgtgcccaggagggctggaggcgccgtgcagtaaccgt
ggtacctgcgatgacaaaatcggtggctcagggagatgcaactgcagccaggctttcatc
gggaccagctgtgagctgtgtgcgccgggcagatatgggccagactgccgagagtgtaac
tgtaccgagaatggcgtgtgcaacggaggactgcatggcgatggcttctgcttctgtgct
gagggctggactggagaccgctgcgaaatcagactagtcatgacgcccacctgctctcca
ccgtgccacccccatgccgtctgccgctcaggcaacctctgtgaatgcaacctacactac
gaaggagatgggagaacgtgctcagtgatcgacatgtgcagccaggacaacggggggtgc
gccaagcacgcagagtgcacgcaggttggcgtgaatgtctcctgtgcctgtgctcctggg
tatggaggtgacggctacgtctgtgaccccatcgacagatgtgcggacggtaggaacggg
gactgcagcgagcacgccaactgcatcagcaccgggccgaacgagcggcactgtgagtgc
aagcagggctacatcggtgacgggatccagtgcctggaagaggctgtgccccccacggac
cggtgcctggaagacaacgggcggtgccatcggcaggccatttgcaccgacctgcacttt
catgataagactgtgggcgtatttcatctgcagtcaccccgaaaaaagtacgacttcact
tacgagcaggctcagaaggcctgtgccgcagaaggcgcttccctggccactttccagcag
ctctcagcagcacagcagatgggattccatctgtgcttggtgggttggctggacaatggc
acagccggataccccacggcctaccccagccccagctgtggggctaaccgagtgggcatc
atggactatggcccccgaagcaacctgagcgagacctgggatgcgttctgctaccgggag
aaggatgtgacttgcacctgccgtgatgggttcgtgggagatgggtattggtgcagcggc
aaactccccgatgtcctcgcagaccacgatcgcttctccaccttctattccatgttgctc
gattttgccaatgaaacagaaggaggactggacttgttcctctatttgtctgatgactcc
gctcccaaaactctgtttgtccctctgaattctggcttcgcagacaatgaaacactgacg
ggagaagagctgaagctccatgtgtcatccagcaacatcgtcctcttcagcttcaacctc
acaacgggcaccatcatcccatcccagtcaggatacgacctccatgtatcagacctccca
gcgggcaacagcacagagcactcggatgccaaggggatcaatgacacgatgatcgtggag
tgggacatagtagctttcaacggcatcattcacgcgatcgcagagccgctgaggatcccc
ccgcccatcgctaatcttggtcaggtgaacggcgtggcccgggcgccgggctccgtggcc
acggggacgctgtcagcgctgtgctttgcgctggtgctggcagccgctgccggcgccgcc
tattactgcgtgaagaggcggcggcgggaggagcagttcgggtatttccaggcggacctg
cgcgaggaggaagaggaggaggaggcggaggcggcgccgcagcaggagcgcggggcgccg
cgcgccgcccggctccgcccccagcggccgctcgtcgccatccccaacccgctctacggc
ggacacgcccccgactacgagccgctgcaggacgcgctgctggcggacgccgaccaccgc
cgctcgccgccgtga
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integrated database retrieval system
