Rissa tridactyla (black-legged kittiwake): 128915841
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Entry
128915841 CDS
T09443
Symbol
PBRM1
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128915841 (PBRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtd03021
]
128915841 (PBRM1)
03036 Chromosome and associated proteins [BR:
rtd03036
]
128915841 (PBRM1)
Transcription machinery [BR:
rtd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128915841 (PBRM1)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
128915841 (PBRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128915841
NCBI-ProteinID:
XP_054072639
LinkDB
All DBs
Position
10:complement(17847898..17913329)
Genome browser
AA seq
1711 aa
AA seq
DB search
MRRLAFRGAGCTLVNLKKLDSMGSKRRRATSPSSSVSGGDFDDGHHSTNIPGPSRKRRRL
SNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQ
QKLKMEEYDDVNVLTADFQLLFNNAKAYYKPDSPEYKAACKLWELYLRTKNEFVQKGDAE
EEDEDEDGHDNQGANSELSSPGYLKEILEQLLEAVAVATNPSGRLISELFQKLPSKVQYP
DYYAIIKEPIDLKTIAQRIQNGTYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAIKK
IFNMKKAEIEHSELAKSSLRIRTPNLTASKLTGPSSQGKGSVGDERNSSNKYYRNKRSAQ
GDRLSAITMALQYGSESDEDAALAAAARYEEGESEAESITSFMDTSNPLYQLYDTVRSCR
NNQGQLISEPFFHLPSKKKYPDYYQQIKTPISLQQIRTKLKNHEYETLDQLEADLNLMFE
NAKRYNVPNSAIYKRVLKMQQVMQAKKKELARRDDIEDGDSMISSATSDTGSSKRKSKKN
IRKQRMKILYNAVLEARESGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRN
DKYVGEEAMIEDMKLMFRNARHYNEEGSQVYNDAHMLEKILKEKRKELGPLAEDDDVASP
KLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYY
VTIKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLL
ETRREIEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNK
PPLTFDIIRKNVENNRYRRLDLFQENMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRD
ELCKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEEKREAEKSEDSSGS
AGLSSLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCW
FYRPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVY
VCESRYSAKTKSFKKIKLWTMPVSSVRFVPRDVPLPVVRVASVFANTDKVDEEKHAETLE
DSKVGESILHLEKDKEDVPVEMSNGEPGCHYFEQLCYNDMWLKVGDCVFIKSHGLVRPRV
GRIEKMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMTCILGKCAVL
SFKDFLSCRPTEISENDVFLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIV
PQKEPSPLLEKKIQQLEAKFAELEGGDEDMEEMGEEEGDMTETPSMPQLQTPLASDLDIM
PYTPPQSTPKSVKGSTKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTE
WRNLEATKKAEYEERAAKVAEQQERERAAQQQNSSPRAGTPVGALMGVVPPPTPMGMLNQ
QLTPVAGMISGYPPVLPPLQGPVDGIVSMGSMQPLHPGVPPPHQLPPGMPGIPGIPPPGV
IGQNVSPMVGTPAPGASPFGQQIGILGPPGQQAPPPYPGQSPVSQPVMQQPTTPMFVSPP
PKTQRLLHSEAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGA
HTTMADALWRLRDLMLRDTLNIRQAYNIENV
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atgaggagactggcttttcgaggtgctggttgtactctggtaaatctgaagaagttggat
tccatgggttccaagaggcgaagagctacctcaccttccagcagcgtcagtggaggagac
tttgatgatggccaccactccacgaatataccaggcccaagcagaaagaggaggagactt
tccaatctcccaactgtagatcctattgctgtatgccatgaactttacaacaccatcaga
gattacaaagacgaacagggcaggctcctttgtgagcttttcattagggcaccaaagcga
agaaatcagccagattattatgaagtggtttcccagccaattgatttaatgaaaatccaa
caaaagctgaagatggaggaatatgatgatgtgaatgtgctgactgctgattttcagctt
ctctttaacaatgcgaaggcttactataagccggattctcctgaatataaagctgcctgc
aaattatgggagttgtatttgcgcacaaaaaatgaatttgttcaaaaaggtgatgctgag
gaagaagacgaagatgaggacgggcacgacaatcaaggcgcaaattctgaattatcatct
ccaggttacctgaaggaaattcttgaacagcttctcgaagctgtagctgttgccacaaac
ccatcaggacgcctcataagtgaactgtttcagaaacttccttctaaagtgcaatatcca
gattattatgcaataataaaggagcccatagatcttaaaactattgcccaaaggatacag
aatggaacttataaaagcattcatgcaatggccaaggatatagatcttctggcaaagaat
gccaaaacctacaatgagcctggatcacaagtattcaaggatgcaaatgcgattaaaaaa
atatttaatatgaaaaaggctgaaattgaacacagtgagttggccaagtcaagtctccga
atcaggacaccaaatttgactgcttccaagctgacaggtccttcctcacagggtaaaggc
agtgttggtgatgagagaaattcttctaacaaatattatcgtaacaaaagatcagcccaa
ggggatcgtttatcagcaataaccatggcattgcagtatggatcagaaagtgatgaggat
gcagctttggctgctgctgctcgttatgaagagggagaatctgaagccgagagcattact
tccttcatggacacttctaatcctctttatcagctttatgacacagttagaagttgccga
aataatcagggccagctcatatctgaaccctttttccacttgccctccaagaagaagtat
cctgattattatcagcaaattaaaacacctatttcattacagcaaatcagaaccaagctg
aagaaccacgaatatgaaactttagatcagttggaggctgatctgaatttgatgtttgaa
aatgccaagcgctacaacgttcccaattctgccatctataaaagagtactgaaaatgcag
caggttatgcaggcaaagaagaaggagcttgctaggagagacgacattgaggatggggac
agtatgatttcttctgctacatcagatactggaagctcaaaaaggaaaagtaaaaagaat
atacgaaagcaacgaatgaagatcttatacaacgcagttctggaagctcgagaatcaggc
acaggcagacggctctgtgatctgtttatggttaagccatccaaaaaggactatccagac
tattataaaattatcttggagccaatggacttgaaaatgatagaacacaacatccgcaat
gataagtacgtaggggaagaagccatgattgaagacatgaagctcatgttccgaaatgca
aggcattataatgaggaaggctcccaggtatacaatgatgcccatatgctggaaaagatc
cttaaagaaaaaaggaaagaactggggcccttagctgaagatgatgatgttgcatcccct
aaactaaagctaagtagaaaaagtggcatttctcctaaaaaatcaaaatacatgactcca
atgcaacagaaattgaatgaggtgtacgaagcagttaagaattacacggataaacgaggc
aggcgactgagtgccatcttcttgaggctgccatctcggtctgaacttcctgactattat
gtgaccattaaaaagcccgttgacatggaaaagatcagaagtcacatgatggcaaataaa
taccaggatattgattccatggtagaggactttgtaatgatgttcaataatgcttgcaca
tacaacgaaccagaatctttgatttataaagatgccctggtcctgcataaagttttgctt
gaaactcggagagaaatagaaggagatgaggattctcatgtgcccaatgtcactttgcta
attcaggaacttatccataacctttttgtatctgttatgagccaccaggatgatgagggc
agatgctacagcgactccttagctgagattcctgctgttgatcccaacttcccaaataaa
cctcctctgacttttgatattatccgaaaaaatgttgaaaataatcgctacagaagattg
gacttgttccaggagaatatgtttgaggtactggagagggcaaggagaatgaacaggact
gattcagagatttacgaggatgcggttgaacttcagcagttctttattaaaattcgagat
gaactttgtaagaatggagagattcttctgtcacctgctctcagctataccaccaagcat
cttcacaacgatgtagaaaaggaaaagaaggaaaagctgcccaaagaaatagaggaggat
aagctcaaaagagaggaggagaagagagaagctgaaaagagtgaagattcttctggatca
gctgggctgtcaagcttgcatcggacctacagccaggattgcagcttcaagaacagcatg
taccatgtaggagattatgtgtatgtggagcctgcagaagccaacttgcaacctcacata
gtctgtattgagaggctgtgggaagattcagccggagagaaatggctctacgggtgttgg
ttttatcgacctaatgaaacgtttcatcttgcaacacgaaaattcttggaaaaagaagtt
tttaaaagtgactattacaataaagttcctgttagcaaaattttaggcaaatgtgtggtc
atgtttgtcaaggaatattttaaattgtgtcctgaaaacttcagagatgaggatgtctat
gtctgtgagtcacgttattctgcgaagacaaaatcttttaaaaagattaaactgtggact
atgcctgtaagctctgtaaggtttgtcccgcgagacgtgcccctgcctgtggtccgtgtt
gcttctgtgtttgctaatacagacaaagtagatgaggagaaacacgctgaaacattggag
gacagtaaggtgggagaaagtatccttcatcttgaaaaggacaaagaagatgttccggta
gaaatgtccaatggagaacctggttgccattactttgaacagctctgctacaatgatatg
tggcttaaggttggggactgcgtcttcataaaatcacatgggttagtgcgacctcgggta
ggaagaattgaaaagatgtgggtgcgagatggagccgcgtatttctttggtccaatcttt
atacatcctgaagaaactgaacatgaaccaactaaaatgttctacaagaaggaagtgttc
ttgagtaacttggaggagacctgtccaatgacttgcattttgggaaagtgtgccgttctg
tccttcaaagacttcctctcctgcagaccaacagaaatctctgaaaatgatgtttttctt
tgtgagagccgctacaatgaaagcgacaaacaaatgaagaaatttaaagggctgaagagg
ttttcactctctgcaaaagttgtagatgacgaaatatactattttagaaaacccatagtt
cctcagaaggaaccatctccgctactggaaaagaagattcagcagctagaagcaaaattt
gctgagttggaaggaggcgatgaggacatggaagagatgggagaagaggaaggtgatatg
actgaaacgccatctatgcctcagcttcagaccccgttagctagtgatttggatataatg
ccttatactcccccacagtccactcccaagtctgttaagggcagcaccaagaaggaggga
tcaaaaaggaagatcaacatgagtgggtacatcttatttagcagcgagatgagagctgtg
attaaagctcagcacccagactactcgtttggagagctcagcaggctcgtaggaactgaa
tggagaaacttggaagcaacaaagaaagcagaatatgaagagcgggcagctaaagttgct
gagcagcaggagagagagcgagcagcacagcagcagaattcctccccccgggcaggcact
cctgtcggggctcttatgggggtggtgccgccaccaacaccaatgggaatgctcaatcag
cagttgacacccgttgcaggcatgataagtggctatccaccggtgctgccacctttgcag
ggcccagttgatggcattgttagcatgggcagcatgcagccacttcacccaggggtgccc
ccaccccaccaacttccgccaggtatgccaggcatcccaggcatcccaccacccggtgtt
ataggccaaaatgtgtcccccatggtaggcactccagcacccggagcaagtccttttgga
cagcagataggaattcttggcccgccgggacagcaggcaccccctccgtatcccggccag
agcccagtgagtcagccagtaatgcagcagcccacgactcccatgtttgtctcccctcca
ccaaagacacagaggcttcttcattctgaagcctatctgaaatacattgaggggcttagt
gctgaatcaaatagtattagcaagtgggaccagacccttgcagcacgaagacgagatgtc
cacttatcaaaagaacaagagagccgactcccttcgcactggttgaaaagtaaaggggct
cataccacaatggccgatgcattatggcgtctgcgagacttgatgctacgagacaccctt
aacatccgtcaggcatacaacatagaaaatgtttag
DBGET
integrated database retrieval system
