Rissa tridactyla (black-legged kittiwake): 128915927
Help
Entry
128915927 CDS
T09443
Symbol
GEMIN5
Name
(RefSeq) gem-associated protein 5
KO
K13133
gem associated protein 5
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128915927 (GEMIN5)
03041 Spliceosome [BR:
rtd03041
]
128915927 (GEMIN5)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
128915927 (GEMIN5)
mRNA cycle factors
P-body specific factors
128915927 (GEMIN5)
Spliceosome [BR:
rtd03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
128915927 (GEMIN5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GEMI5_RBS
TPR_GEMI5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
ANAPC4_WD40
DSE1_N
Beta-prop_WDR3_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_RIG_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
WD40_Gbeta
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
PAC11
ASA1
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Beta-prop_NOL10_N
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_Nup120_160
NBCH_WD40
DNAI3_WD
WD_LRWD1
TPR_IF140-IFT172
Tricorn_2nd
UPF0242
Motif
Other DBs
NCBI-GeneID:
128915927
NCBI-ProteinID:
XP_054072858
LinkDB
All DBs
Position
11:2870291..2888618
Genome browser
AA seq
1530 aa
AA seq
DB search
MAAVRVLPASPNWYSSRCSDTSGDGRLFGFAARHRVCLLDVSGGAPAFYGELIGHTDRIS
GFVFCQCPGQSSLCASSSDDGSVQIWDTEALAPVAEHSLHQNAISALHWSPLVKDLIVSG
DEKGIIVCYWHNRSDSQQFFPEPRTIFCLTCSPHHENLVAIGYKDGMVVIIDISRKREVL
HRLRGHDDEIHCLAWCPVPGEERLSAWQDELQVPSEEGKVPNGELTQDTTTKKGCYLASG
SKDQTIRIWSYTRGRSVMTLKLPPTKRRGGAVDPAVKERIWLTVHWPSGRSTEIVSSSFG
GELLLWDLTQSGKRKWTLLGSSEGQNHSRIVFNLSSVKRQDKELLFSISMDRDVKCWDLS
TLDCSWTMPSLGGFVYSLAFSPVDTGCLAIGVGDSMIRVWNTLSMNNIYDVKTFWQSIKS
KVTALSWHPTKEGCLAFGTDDGKVGIFDTFSSSAKNKPPQISSTYHKKTVYTLAWGPPTP
PLSSEGEGEQPSVTLYSCAGEGIVFQHNPWKLNGEANDINKVIRDTNSIKHKLPARTEIS
WKPDGKLLALGNEDGSIEIFQAPDLKLLCTIQQHHKLINAIRWHHEHGSQPDLSYLIASG
SINATIYVHNLKSVVESTSESPVTITEPFRTLAGHTAKITSLSWSPHHEGRLVSACYDGT
AQVWDVMKEEPLCNYRGHQGRLLSVQWSPVDSDSVYTGADDFSVHKWQISKQEHTRPPQG
KKSIELEKKRSMQPKVKTKKKKKPIGKSPAKQDPSDAVNGDESVKEMLPEENGVSDHEGE
KETQETELPDKVSMTVSKDTPSSAYDYSSFSLPKPFVTQKAAAVKKDPPKEKQTVDASLK
KRKPRSILPFSTFMDHRSKDELHQDCLRLATCLKTKDNNEDVSPDLKDRIHLGLFMDRAS
LHKMIDVEGKHHLENGHPELFQQLMLWKGDMKGVLQAAAERGELTDQLVAMSPMVGYQAW
VWTVEAFAKQLCFQEQYVKAASHLLSIHKVYEAVELLKVNHFYREAIVIAKARLRPEDPI
LKDLYTSWAALLEKDGHYSMAAKCYLGAASPYDAVKVLAKKGDVTSLKTAAELALVSGEE
ELSASLSLRCAQDLLLSRNWVGAQEVLQQHKTLFGQRLVFCLNELLCKCLSERNPCDRKS
PVPPCYHSWELNREASFFDMVIEVWQNKLGMDSTEQATCAREQLRSIEHPPSTSNSHPKQ
VLFHISHDLTLAALSYRTATWDETVKSILGAVSRSYDAGNFTLMQEICSIVLPEGCDNLR
HKLDGTDSQSMDACRSLEGFVAYGLLYDLWWNPPKESLVLQKAVVDPVLHPSEQTAVEKS
YISGQSSSEETPDQTAVEMDENLCNTNEVCGCETESDSRSSSLNLVDSQPKLNGCKVLLS
EEIAALQNTQRDIAEVQQILADMIRQHQQQRNNLQENTNGITQESNVQQNSEAGLDKPCS
DSNQMNCKDEVKEPITLPELTKQLLKAKEKLAEFPDNLKVFPFPDVLECCLVLLHTGSLC
PPELHEQALDLLKKHGSANIYKKAVRRFLT
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgcgggtgctgcccgcctcgcccaactggtacagcagccgctgcagcgac
accagcggcgatggccgcctcttcggcttcgcggcgaggcaccgcgtctgcctgctggat
gttagcggcggcgcacccgcgttttacggagaactcatcgggcacacggacaggatctcc
ggattcgtgttttgccagtgcccagggcagagcagcctctgcgccagcagctccgacgat
gggagcgtccagatttgggacacggaggccctggctccggtggcggagcacagcctgcac
cagaacgcgatctcagcgttgcactggtcacctcttgtgaaagatctgattgtatccggt
gatgaaaaaggtataattgtttgttactggcacaacagaagtgacagccagcagttcttt
ccagagcctcggacgattttttgtctcacttgttctcctcatcatgaaaaccttgtggcg
attggctacaaggatggcatggtggttataattgatatcagcaggaaaagagaagtactc
catcggctaagaggccatgacgatgaaatacattgtctggcctggtgccctgttcctggt
gaagaaaggttatctgcttggcaagatgagctccaagttccttcagaggaaggcaaagtt
ccaaatggggagctgacacaggacacaaccacgaagaaaggttgttacctggcttcagga
agcaaagatcagaccatacgaatatggagctatactcgaggcagaagtgtaatgactttg
aagttgccacccacgaagagaagaggtggagctgtagatcctgctgttaaagagcgcatt
tggctgactgttcactggccttctggtcgttccacagaaattgtatccagctcttttgga
ggagaactgctgctctgggatttgacccaatctggaaaacgcaagtggactcttctagga
tcttcagaaggacaaaatcactcccgcattgtgttcaatctgagttctgtgaagcgtcaa
gacaaagagctccttttttccatttcaatggacagagatgtgaagtgctgggacctatca
actcttgactgtagctggaccatgccctctcttgggggattcgtctatagtcttgccttc
tcccctgtggacacgggctgtcttgccatcggtgttggagacagcatgatccgggtgtgg
aatactttgtccatgaacaatatttatgatgttaaaaccttctggcaaagcataaagtcc
aaagttacagcattatcctggcatccaactaaggaaggctgcttggcttttggaacagat
gatggaaaagttggcatatttgacaccttctccagcagtgctaagaacaagccacctcag
atctccagtacttaccacaagaagactgtgtacacgttagcctgggggcctccaactcct
cctctgtcttctgaaggagaaggtgaacagccctctgtaactttatatagttgtgctgga
gaaggtattgtttttcaacacaacccctggaagcttaatggagaggcaaatgacatcaac
aaagtcatccgagacactaattcaatcaaacacaaactgcctgcgcgtacagagatcagc
tggaaaccagatggcaaactcttggctcttggcaatgaagatgggtcaattgaaatattt
caagcgccagacttgaagttgctctgcactatccaacaacatcataaactgattaacgct
attcgttggcatcatgagcatgggagccagccagacctaagttacttgatagcttcaggc
tcaatcaatgccactatttatgtgcataatctgaagagcgttgtagagagcacttcagaa
agtcctgtgacaataacagagccttttcgaactctggctgggcacacagctaaaatcaca
agtctttcttggagcccccaccatgagggaagattggtatctgcttgctatgatggcact
gcacaggtatgggatgttatgaaggaagagccactctgcaactatcgagggcaccagggc
cggctgctgagtgtccagtggtcaccagtggattcagattctgtttatacaggagcagat
gatttttctgttcacaaatggcagatctcaaagcaggagcacacacggcctcctcagggc
aaaaagagtatagaattggagaaaaaaagaagtatgcaaccaaaagtcaagaccaagaag
aaaaaaaagcctataggaaagagtccagccaagcaggatccaagtgatgctgtgaacgga
gatgagagcgtgaaggaaatgttgccagaggaaaatggagtgtcggaccacgaaggagaa
aaagaaactcaggagacagagttgcctgataaagtctccatgactgtgtccaaggataca
ccttcatctgcatatgattattcttcattcagcttgccaaagccttttgtgacccagaaa
gccgctgctgtgaaaaaggatccacctaaagagaaacaaactgttgatgcctccctgaag
aagaggaagcctcgttctattctacccttcagcacattcatggatcacagatcaaaagat
gaattgcatcaggactgtctgaggctggctacgtgtctgaaaaccaaagataataatgaa
gatgtgtcccctgacctgaaggatcgcatccacctggggctgttcatggacagggcttct
ctgcacaagatgattgatgtggaaggaaaacatcacttggagaatgggcatccagagctc
tttcagcagctcatgttgtggaaaggagatatgaagggtgtcctccaggcagctgctgag
aggggagagctaacagaccagctggtagcaatgtcgcccatggttggatatcaggcctgg
gtttggacagtagaagcctttgcgaagcagctgtgttttcaggagcaatatgtgaaggct
gcctcccatctcctctccatccataaagtgtacgaggctgttgagctcctgaaagtgaac
catttttacagggaagcaattgtaattgctaaggccaggttgcgtccagaagatccaatt
ctgaaggatctctacaccagctgggcagctctgttagagaaagatggtcattattccatg
gccgccaaatgttatttgggggccgcctcaccctatgatgcagttaaggtgttggcaaaa
aagggggatgtgacatcccttaaaactgctgcggagcttgcgctggtatctggagaggag
gagttgtcagcaagtttgtctctcagatgtgcccaagacctgctgttgtccaggaactgg
gtgggagctcaggaagtccttcagcaacataaaactttatttggacaaagacttgttttc
tgccttaacgaactgctttgcaagtgccttagtgaaagaaatccctgtgaccgaaagagc
cccgtgcctccctgttatcacagctgggagctgaacagagaggcctcattctttgacatg
gtgatagaagtgtggcagaacaaattgggcatggactccactgaacaagccacgtgtgca
cgggagcagctgcgcagtattgagcatcctccttctaccagcaactcacacccaaagcag
gtgcttttccatatctcccatgacctgacccttgcagccctgagctatcggaccgctacc
tgggatgagacagtgaaaagtattcttggagctgtgtcccgcagttatgatgctggcaat
ttcactctgatgcaagagatctgcagtatcgtccttcctgaaggctgtgataacctgaga
cacaaactggacggcacagattcccagagcatggacgcttgcagaagtttagagggcttt
gtggcctatggactgctgtatgacctgtggtggaacccacccaaagaatcccttgtcctg
caaaaggctgttgtggatcctgtgctccatcccagtgagcagacagctgttgagaagagt
tacatttcaggtcagtcttcctctgaagaaactcctgatcaaactgcagttgagatggat
gaaaacctctgcaatacaaatgaagtttgtgggtgtgagacagaaagtgactcgagaagt
agctcgttgaatttggtagacagtcagccaaaactgaatggctgcaaagtgcttctttca
gaagagattgctgctttacagaacacccagagagatatagctgaggtccagcagatttta
gcagatatgatccgccagcatcagcagcagaggaacaatctccaggaaaacacaaatgga
atcacccaggaaagcaacgtgcagcagaattcagaggctggattggacaaaccatgctct
gacagcaaccagatgaattgtaaagatgaagtaaaggaaccaattacactccctgagcta
acgaagcagcttctaaaagcaaaggagaaactagcagaatttccagacaatttaaaggtc
ttcccgttccccgacgtgctggagtgctgccttgtactccttcacaccggatccctgtgc
cctcctgaactacacgaacaggcattggatctccttaagaaacacggtagcgctaatatt
tacaaaaaggctgtcaggaggttcttgacatga
DBGET
integrated database retrieval system
